Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A8 F50 I3 R1
|
168 |
141.0 |
4346284 |
99.6% |
4328898 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,223,586 |
C→T |
V15I (GTT→ATT) |
iclR ← |
transcriptional repressor |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,223,586 | 0 | C | T | 100.0%
| 595.8
/ NA
| 143 | V15I (GTT→ATT) | iclR | transcriptional repressor |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base T (55/88); total (55/88) |
Only 100 of 147 total aligned reads displayed.
AGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCA > NC_000913/4223438‑4223732
|
aGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAAtgg < 2:470952/151‑1 (MQ=255)
aGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAAtgg > 1:954748/1‑151 (MQ=255)
gCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGAATCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAAtgg > 2:169385/1‑150 (MQ=255)
ggCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCggg < 1:968948/151‑1 (MQ=255)
gggTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCTAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCt < 1:1142555/151‑1 (MQ=255)
gggTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCt < 1:160848/151‑1 (MQ=255)
gTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGc < 1:635709/151‑1 (MQ=255)
tGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTTTGCcgc > 2:1502455/1‑150 (MQ=255)
ggAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCcgcg < 1:3767/150‑1 (MQ=255)
gAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCggg < 2:2101220/137‑1 (MQ=255)
aTTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAGTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTc < 2:896419/151‑1 (MQ=255)
gggTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTcgcg < 2:153236/151‑1 (MQ=255)
gggTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTcgcg < 2:102182/151‑1 (MQ=255)
aaCCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTTTGCCCGGTTTccgggg > 1:745130/1‑144 (MQ=255)
aaCCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGaa < 1:1302560/151‑1 (MQ=255)
aCCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAAt < 2:1772276/151‑1 (MQ=255)
cccGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATg < 2:1155250/151‑1 (MQ=255)
ccGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTTCCGCGTTTCGCGGGGATgg > 2:354849/1‑151 (MQ=255)
cGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTTTGCCGCGTTTCGCGGGGATggg > 2:89680/1‑151 (MQ=255)
tgttgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGc < 2:615274/149‑1 (MQ=255)
tgttgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGc < 2:1240013/149‑1 (MQ=255)
gttgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGAc < 2:1438217/151‑1 (MQ=255)
ttgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCGCGTTTCGCGGGGATGGGGGCGAcc > 1:173548/1‑151 (MQ=255)
tgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTTTGCCGCGTTTCCCGGGAATGGGGGCGGcc > 1:2144472/1‑150 (MQ=255)
tgCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGAcc < 2:534243/150‑1 (MQ=255)
gcgcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCa < 1:15423/150‑1 (MQ=255)
gcgcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCAt < 1:1648091/151‑1 (MQ=255)
gcgcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCAt < 1:213335/151‑1 (MQ=255)
cgcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATg < 1:1257439/151‑1 (MQ=255)
cgcCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATg < 1:1275973/151‑1 (MQ=255)
ccAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGAc < 1:1750896/151‑1 (MQ=255)
gTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGt < 2:1855455/151‑1 (MQ=255)
tCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGtc < 2:2009744/150‑1 (MQ=255)
tCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTTTGCCGCGGTTCGCGGGAATGGGGGCGGCCaaggacg > 1:1220797/1‑142 (MQ=255)
gTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCtt < 1:2133872/151‑1 (MQ=255)
gAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGGCCATGACAGTCTCtttt > 1:1594849/1‑151 (MQ=255)
gAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCtttt < 2:393973/151‑1 (MQ=255)
gAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCtttt < 1:313707/151‑1 (MQ=255)
gAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCttt < 1:73486/150‑1 (MQ=255)
gAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCttt < 1:897781/150‑1 (MQ=255)
gTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCtttttt < 1:398752/151‑1 (MQ=255)
gCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCt < 2:769933/151‑1 (MQ=255)
cacTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTAt < 1:1307071/151‑1 (MQ=255)
cacTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTAt < 2:581587/151‑1 (MQ=255)
cacTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTAt < 1:2043242/151‑1 (MQ=255)
cacTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTGCTGTAt < 1:16655/151‑1 (MQ=255)
cacTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGACAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTAt < 2:126856/151‑1 (MQ=255)
acTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCGCGTTTCGCGGGGATGGGTGCGACCATGACAGTCTCTTTTTTTTGTAt > 2:1079764/1‑150 (MQ=255)
gCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCg < 2:1508897/149‑1 (MQ=255)
gCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCg < 1:430178/149‑1 (MQ=255)
gCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCg < 2:424965/149‑1 (MQ=255)
gCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGt < 2:1334701/150‑1 (MQ=255)
cATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGa < 1:900759/151‑1 (MQ=255)
aTTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGaa < 1:250452/151‑1 (MQ=255)
tGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGaaa < 1:832433/150‑1 (MQ=255)
aTTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAtcat < 2:559549/151‑1 (MQ=255)
cGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGGGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAtcatttt > 2:735761/1‑151 (MQ=255)
cGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCCCGGTTCGCGGGGATGGGTGCGACCATGACAGTCTCTTTTTTTTGTATCGTGGAAAtcatttt > 2:263437/1‑151 (MQ=255)
ggCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAtcattttc < 2:952820/151‑1 (MQ=255)
gCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGGATGGGTGCGACCATGACAGTCTCTTTTTTTTGTTTCGTGGGAAtcatttt > 2:1341758/1‑149 (MQ=255)
gCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAAtcattttca < 1:1003674/151‑1 (MQ=255)
cAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCGCGGTTCGCGGGGATGGGGGCGACCATGGAAGTCTCTTTTTTCTTTATTGTGGAAAtcatttt > 2:1298056/1‑148 (MQ=255)
aTCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTTTGCCGCGGTTTGCGGGGATGGGGGCGACCATGACAGTCTCTTTTTTTTGTATCGTGGGAAtcatttttattt > 2:1237401/1‑151 (MQ=255)
ccACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATcattttcatttt < 1:104267/150‑1 (MQ=255)
ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTAtt < 2:777889/149‑1 (MQ=255)
ccAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGt < 2:1880823/151‑1 (MQ=255)
cAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGtt < 2:1499072/151‑1 (MQ=255)
gTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAg < 1:1387557/151‑1 (MQ=255)
aaTTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCGCGTTTCGCGGGGATGGGGGCGACCATGACAGTCTCTTTTTTTTGTTTCGGGGGAATCATTTTCATTTTTTTTTTTAGCt > 2:1206235/1‑151 (MQ=255)
tCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAAt < 1:274476/150‑1 (MQ=255)
tCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAAt < 1:1602626/150‑1 (MQ=255)
cAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGc < 1:1078371/151‑1 (MQ=255)
aCGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGt < 1:1933327/151‑1 (MQ=255)
gcgTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTTTGGCGCGGTTTGCGGGGATTGGGGCGACCCTGGCAGTCTCTTTTTTTTTTTTTGTGGGAATTATTTTTATTTTTTTTGTTTGCTAATTCAATAAtt > 2:808791/1‑150 (MQ=255)
cgTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGGATGGGTGCGACCATGACAGTCTCTTTTTTCTTTATCGTGGAAATCATTTTCATTTTTTTTGTTAGCTTATTCAATAGtt > 2:377798/1‑149 (MQ=255)
cgTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGGGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGtt > 1:1155584/1‑149 (MQ=255)
gTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGGTTCGCGGGAATGGGGGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTact > 2:1552214/1‑151 (MQ=255)
aGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTactgaact < 1:976419/151‑1 (MQ=255)
gACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGGTTCGCGGGAATGGGTGGGACCATGACAGTCTCTTTTTTCTGTATCGGGGAAATCATTTTCATTTTTTTTGTTAGCTAATGCAATAGTTactgaact > 1:1173252/1‑150 (MQ=255)
aCTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAAAGGGTGCGACCATGACAAGCTCTTTTTTCTGTATCTTGGGAATTCTTTTCATTTTTATTTTTTGCTAATGCAATAGTTtcttaa > 2:1445290/1‑147 (MQ=255)
cTGAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGGTTTCTGCCGCGTTTCGCGGGGATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGGAATCATTTTCATTTTTATTTTTAGCTAATGCAATAGTTACTGAACTGAt > 1:631928/1‑151 (MQ=255)
gAACCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGAt < 2:1198504/149‑1 (MQ=255)
aCCTGTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGGTTCGGCGGGATGGGGGCGCCCATGACCGTTTCTTTTTTTTTTATCGAGGGAATACGTTTCATTTTTTTTTTTTAGTAATGCAAAAATTACTGAACTGATcc > 1:1837049/1‑149 (MQ=255)
gTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGa < 2:2114347/150‑1 (MQ=255)
gTCCAGTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAg < 2:744628/151‑1 (MQ=255)
gTCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAAt < 2:1792293/151‑1 (MQ=255)
tCGCTGGTGCGGTGGCAATGGCGGGTTTTTTGCCGCGTTTCGCGGGAATGGGGGCGGCCATGACAGGCTCTTTTTTCTGTATCGTGGGAATCATTTTTATTTTTTTTGTTAGCTAATGCCATAGTTACTGAACTGATCCGATGAGttta > 2:1701560/1‑147 (MQ=255)
tCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTTGCGGGGATGGGGGCGGCCATGACAGTCTCTTTTTTTTGTATCGTGGGAATTATTTTCTTTTTTTTTGTTAGCTTATGCAATAGTTATTGAACTGATCCCATGAGtt > 2:266819/1‑147 (MQ=255)
tCGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGGGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTTTTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAAt > 1:577468/1‑150 (MQ=255)
cGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATg < 1:1985779/150‑1 (MQ=255)
cGCTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGGTTCGCGGGAATGGGGGCGGCCATGACAGTCTCTTTTTTTTGTATCGTGGGAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGt > 2:1076348/1‑151 (MQ=255)
cTGGTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGtt > 1:847120/1‑150 (MQ=255)
ggTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGaa < 2:1938267/151‑1 (MQ=255)
ggTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGa < 2:1541004/150‑1 (MQ=255)
gTGCGGTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAAc < 1:130106/151‑1 (MQ=255)
gTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAAtc < 1:622977/151‑1 (MQ=255)
gTGGCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAAtc < 2:950030/151‑1 (MQ=255)
ggCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAAtctc < 2:1598127/151‑1 (MQ=255)
ggCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAAtct < 1:1482618/150‑1 (MQ=255)
gCAATGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCa < 2:822998/151‑1 (MQ=255)
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AGCAGGCGGTGGGTCGTGGAATTGGGTAACCCGGCTTGTTGCGCCAGTTCCGTGAGTGCCACACTGCCATTGGATTCGGCAATCCACTCCAGTAATTTCAGGCCACGCGTTAAAGACTGAACCTGTCCAGTCGCTGGTGCGGTGGCAACGGCGGGTTTTCTGCCGCGTTTCGCGGGAATGGGTGCGACCATGACAGTCTCTTTTTTCTGTATCGTGGAAATCATTTTCATTTTTATTGTTAGCTAATGCAATAGTTACTGAACTGATCCGATGAGTTAATGTTGAACAAATCTCA > NC_000913/4223438‑4223732
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
