Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
1,116,797 |
A→G |
intergenic (‑215/‑10) |
lpxL ← / → yceA |
lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase/putative rhodanese‑related sulfurtransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 1,116,797 | 0 | A | G | 99.4%
| 645.3
/ ‑4.6
| 180 | intergenic (‑215/‑10) | lpxL/yceA | lauryl‑acyl carrier protein (ACP)‑dependent acyltransferase/putative rhodanese‑related sulfurtransferase |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (96/83); total (97/83) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.06e-01 |
Only 100 of 180 total aligned reads displayed.
AAATTTGTGGCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAACCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTTATAT > NC_000913/1116649‑1116944
|
aaaTTTGTGGCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGcc < 1:140766/151‑1 (MQ=255)
gtgGCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTacac < 2:1050971/151‑1 (MQ=255)
ggCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACAcc < 1:771928/150‑1 (MQ=255)
ggCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCa < 1:472842/151‑1 (MQ=255)
cTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATg > 1:345063/1‑151 (MQ=255)
tGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGc > 2:1346397/1‑151 (MQ=255)
gAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGcc > 1:739175/1‑151 (MQ=255)
gAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGCGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGc < 1:118249/150‑1 (MQ=255)
aaGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGcc > 2:494760/1‑150 (MQ=255)
aaGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGc < 3:446461/149‑1 (MQ=255)
aaGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCa < 1:757525/151‑1 (MQ=255)
aaGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCa < 2:1168545/151‑1 (MQ=255)
aaGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCa < 1:870023/151‑1 (MQ=255)
aGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAg < 4:421439/151‑1 (MQ=255)
aCTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAgtg < 1:272168/151‑1 (MQ=255)
aCTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAgtg > 1:331655/1‑151 (MQ=255)
ggCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTac > 2:1231702/1‑151 (MQ=255)
cGAAACTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTaca < 1:675241/150‑1 (MQ=255)
aaaTTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTAcaca > 3:320788/1‑150 (MQ=255)
aTTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAAcc > 4:220450/1‑151 (MQ=255)
tGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGc > 4:332716/1‑151 (MQ=255)
tGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGc > 1:1079790/1‑151 (MQ=255)
tGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGc > 3:226051/1‑151 (MQ=255)
gCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGc < 2:122291/150‑1 (MQ=255)
gcgcTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGAGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATATCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCAttt > 1:32541/1‑151 (MQ=255)
ttGTAAATAACAAATAATTTTTAATGCGCAAATGTCGCGTAATATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGTTTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGCGTTACACAACCGCATTTcc > 4:244055/1‑149 (MQ=255)
tGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCa < 1:407360/149‑1 (MQ=255)
aaTAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAacgacg < 1:437202/151‑1 (MQ=255)
aTAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACaa > 4:360383/1‑133 (MQ=255)
aTAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAacgacg > 1:356597/1‑150 (MQ=255)
aTAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGAcgc > 1:552854/1‑151 (MQ=255)
tAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGAcgcg > 2:742500/1‑151 (MQ=255)
aaaTAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTaa < 1:1010409/151‑1 (MQ=255)
aaaTAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTa > 2:811426/1‑150 (MQ=255)
aaaTAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTa > 4:91898/1‑150 (MQ=255)
ataatTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTaaaa < 2:1735420/151‑1 (MQ=255)
ataatTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTaaaa < 2:1072757/151‑1 (MQ=255)
taatTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTaaa > 1:964588/1‑149 (MQ=255)
atTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGcc > 2:956124/1‑151 (MQ=255)
atTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGcc > 1:366542/1‑151 (MQ=255)
atTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGcc > 2:971464/1‑151 (MQ=255)
ttttAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCa > 1:581052/1‑150 (MQ=255)
ttttAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCa > 1:371957/1‑150 (MQ=255)
ttAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCaaa < 1:1012793/150‑1 (MQ=255)
ttAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCaaa > 1:240589/1‑150 (MQ=255)
tAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCaaaa < 4:111422/150‑1 (MQ=255)
aaTGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAAt < 4:451065/150‑1 (MQ=255)
aTGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGt > 2:250964/1‑151 (MQ=255)
tGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGtt > 1:617697/1‑151 (MQ=255)
gcgcAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTg < 2:1369740/151‑1 (MQ=255)
cgcAAATGTAGCGTAAAATGTGGGGATGTTAATTATCGTTAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGCCGCGCTAAAAGCCAAAATGTTgg > 1:1417366/1‑151 (MQ=255)
aaaTGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTg > 1:759105/1‑151 (MQ=255)
aaTGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTg > 2:1326212/1‑150 (MQ=255)
aTGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTg > 1:205488/1‑149 (MQ=255)
tGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTg > 1:226023/1‑148 (MQ=255)
tAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgc > 2:1015889/1‑151 (MQ=255)
tAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgc > 4:50372/1‑151 (MQ=255)
tAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgc > 3:195329/1‑151 (MQ=255)
aGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgcg < 3:105596/151‑1 (MQ=255)
gTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgcgaac < 1:1496034/151‑1 (MQ=255)
aaaaTGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAgcgaaccg < 2:903984/151‑1 (MQ=255)
tGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCAtt > 3:163127/1‑151 (MQ=255)
gTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCAttt > 4:157793/1‑151 (MQ=255)
ttAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTc > 2:197219/1‑151 (MQ=255)
aaTTATCGATAATTGCTCTATCATCCCGCTGATTTTTACTTTCCCATCTCGCAGGAGCCGTACTCCATGCCAGTGTTACACGACCGCATTTCTAACGACGCGCTTAAAGTCAAAATGTTTGCTGAGAGCGAACCGCGAGCCACCATTTca < 1:1738068/150‑2 (MQ=255)
aaTTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCg < 2:1738504/150‑1 (MQ=255)
aaTTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCg < 3:456091/150‑1 (MQ=255)
aTTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGtt > 1:654529/1‑151 (MQ=255)
aTTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGtt > 2:143407/1‑151 (MQ=255)
tATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGttt < 1:541803/150‑1 (MQ=255)
tCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTAc > 2:367919/1‑151 (MQ=255)
tCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTAc > 3:248704/1‑151 (MQ=255)
cGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTAc > 2:710350/1‑150 (MQ=255)
cGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACa < 2:1243010/151‑1 (MQ=255)
tAATTGCTATATCATCCAGCGGATTTTTATTTTCCCATATCCGAGGAGCCGTACACCATTCCCGTGTTACACAACCGCATTTCCAACGACGCGCAAAAACCCAATATGATCGCTGAAAGCGAACAACGAACCACCATTTCGCTTTAc > 1:68747/1‑147 (MQ=255)
aaTTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGt > 2:415313/1‑150 (MQ=255)
aTTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTAt < 2:445860/151‑1 (MQ=255)
gCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTAttt < 4:473482/150‑1 (MQ=255)
tataTCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTcc > 3:126513/1‑150 (MQ=255)
atCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACAt < 2:640140/151‑1 (MQ=255)
atCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACAt < 1:1614839/151‑1 (MQ=255)
cATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATc < 2:316802/150‑1 (MQ=255)
cATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCg > 3:359638/1‑151 (MQ=255)
ccGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGa < 2:772299/151‑1 (MQ=255)
ccGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGa < 2:1636698/151‑1 (MQ=255)
ccGCGGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGa < 1:1737856/151‑1 (MQ=255)
gcgGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATc > 2:435749/1‑151 (MQ=255)
gcgGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATc > 2:1621709/1‑151 (MQ=255)
cgGATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATcc > 2:1629636/1‑151 (MQ=255)
ggATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCt < 2:1018496/151‑1 (MQ=255)
ggATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCt > 2:863731/1‑151 (MQ=255)
ggATTTTTACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCt < 1:1703595/151‑1 (MQ=255)
tttACTTTCCCATCTCGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGc > 2:1374690/1‑151 (MQ=255)
tCCCATCTCGCATGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCg < 1:1556220/150‑1 (MQ=255)
atcGCAGGAGCCGTACACGATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGATCCGGGACGCt > 1:525709/2‑151 (MQ=255)
cGCAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCtt < 3:592801/150‑1 (MQ=255)
cAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTtat > 4:130099/1‑151 (MQ=255)
cAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTtat > 2:1608789/1‑151 (MQ=255)
cAGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTtat > 1:842904/1‑151 (MQ=255)
aGGAGCCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTtat > 2:1495134/1‑150 (MQ=255)
|
AAATTTGTGGCTGAAGACTGGGCGAAATTGCCGCGCTTGTAAATAACAAATAATTTTTAATGCGCAAATGTAGCGTAAAATGTGTGGATGTTAATTATCGATAATTGCTATATCATGCCGCGGATTTTTACTTTCCCATCTCGCAGGAACCGTACACCATGCCAGTGTTACACAACCGCATTTCCAACGACGCGCTAAAAGCCAAAATGTTGGCTGAGAGCGAACCGCGAACCACCATTTCGTTTTACAAGTATTTCCACATCGCCGATCCTAAGGCGACCCGTGACGCTTTATAT > NC_000913/1116649‑1116944
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
