Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F50 I1 R1 144 141.8 4677362 93.6% 4378010 150.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,793,819 A→G D362G (GAC→GGC)  gabT → 4‑aminobutyrate aminotransferase, PLP‑dependent

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,793,8190AG100.0% 421.5 / NA 121D362G (GAC→GGC) gabT4‑aminobutyrate aminotransferase, PLP‑dependent
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (71/50);  total (71/50)

Only 100 of 126 total aligned reads displayed.

AAGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGACGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCG  >  NC_000913/2793671‑2793966
                                                                                                                                                    |                                                                                                                                                   
aaGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCg                                                                                                                                                   <  1:150507/151‑1 (MQ=255)
 aGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCgg                                                                                                                                                  >  2:1626674/1‑151 (MQ=255)
 aGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCgg                                                                                                                                                  <  2:1441345/151‑1 (MQ=255)
   gtgtTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGgcggcg                                                                                                                                                >  1:118190/1‑151 (MQ=255)
    tgtTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGgcggcg                                                                                                                                                >  1:2946/1‑150 (MQ=255)
     gtTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGa                                                                                                                                               <  1:1052652/150‑1 (MQ=255)
        tGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATcac                                                                                                                                           >  2:594938/1‑151 (MQ=255)
           gCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaac                                                                                                                                        <  1:415476/151‑1 (MQ=255)
            cAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaac                                                                                                                                        >  2:398740/1‑150 (MQ=255)
            cAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaac                                                                                                                                        >  2:870140/1‑150 (MQ=255)
            cAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaa                                                                                                                                         >  1:32879/1‑149 (MQ=255)
             aGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaaca                                                                                                                                       >  1:1509164/1‑150 (MQ=255)
             aGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaaca                                                                                                                                       >  3:497831/1‑150 (MQ=255)
              ggAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCacaacagg                                                                                                                                     >  2:1480093/1‑149 (MQ=255)
                aaaaTCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGcc                                                                                                                                   >  2:374837/1‑151 (MQ=255)
                aaaaTCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGcc                                                                                                                                   >  1:1729971/1‑151 (MQ=255)
                     ctgctgCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACg                                                                                                                              >  3:132379/1‑151 (MQ=255)
                      tgctgcAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGc                                                                                                                             >  2:1363749/1‑151 (MQ=255)
                          gcAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCaaa                                                                                                                         <  2:415782/151‑1 (MQ=255)
                           cAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAGAAACACCCGGAGCTCGGCGACGTACGCGGGCTGGGGGCGATGACCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAAc                                                                                                                        >  1:1335637/1‑151 (MQ=255)
                            aaaaaGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACt                                                                                                                       >  2:252378/1‑151 (MQ=255)
                            aaaaaGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACt                                                                                                                       >  1:613462/1‑151 (MQ=255)
                             aaaaGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTc                                                                                                                      >  2:164413/1‑151 (MQ=255)
                              aaaGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCa                                                                                                                     <  2:1106748/151‑1 (MQ=255)
                              aaaGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCa                                                                                                                     <  1:1577115/151‑1 (MQ=255)
                                   cAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgcc                                                                                                                >  2:1348437/1‑151 (MQ=255)
                                   cAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgcc                                                                                                                <  4:532352/151‑1 (MQ=255)
                                      cGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  2:1553367/1‑149 (MQ=255)
                                       gATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  1:1000861/1‑148 (MQ=255)
                                       gATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  3:424588/1‑148 (MQ=255)
                                       gATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  2:275388/1‑148 (MQ=255)
                                         tCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  4:489966/1‑146 (MQ=255)
                                          cTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAccgccg                                                                                                               >  1:1554797/1‑145 (MQ=255)
                                            ggggCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCGGGAGATCGGCGAGGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGt                                                                                                        <  2:70901/150‑1 (MQ=255)
                                            ggggCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTg                                                                                                       >  2:1079076/1‑151 (MQ=255)
                                                 aGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTgg                                                                                                      >  1:1469329/1‑147 (MQ=255)
                                                 aGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTcg                                                                                                  >  1:604404/1‑151 (MQ=255)
                                                  gAAGTTGCAACACGGATTGCTGGCGATAGCGGCAAAACACCCGGAGATCGGCGACGGACGCGGTCTGGGTGCGATGATCGCCATTGAGCTGTCTGAAGGCTGCGATCAGAACAAGCCTGACGCCAGCCTCACCGCCGCGATCCTGGCCcgc                                                                                                 >  4:477642/1‑151 (MQ=255)
                                                   aaGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCAAAACTCACCGCCGAGATCGTGGCTcg                                                                                                  <  2:290967/149‑1 (MQ=255)
                                                   aaGTTGAAAGACGGATTGCGGGCGATAGCCGAAAAACCCCCGGAGATCGGCGACGTACGCGGGCGGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTcgc                                                                                                 <  2:47514/150‑1 (MQ=255)
                                                    aGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCgcgc                                                                                               >  2:1214446/1‑151 (MQ=255)
                                                      ttGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCAGAGATCGTGGCTCGCGccc                                                                                             >  3:514643/1‑151 (MQ=255)
                                                       tGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGccc                                                                                             <  1:297671/150‑1 (MQ=255)
                                                         aaaGACGGATTGCTGGCGATAGCCGAAAAACCCCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCcgc                                                                                           <  3:211552/150‑1 (MQ=255)
                                                          aaGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAcc                                                                                                                   <  4:463276/125‑1 (MQ=255)
                                                          aaGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCAcc                                                                                                                   >  3:463293/1‑125 (MQ=255)
                                                            ggcGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCTTTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGAt                                                                                        <  4:54265/148‑1 (MQ=255)
                                                               ggATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGCCGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATa                                                                                       <  2:111378/148‑1 (MQ=255)
                                                                 aTTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCAAAACAGGCCGGGCGCCAAATTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAgg                                                                                   <  3:481854/150‑1 (MQ=255)
                                                                     cTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGCTCGTGGCTCGGGCCCGGGTTCAAGGCCTg                                                                               >  1:1162222/1‑150 (MQ=255)
                                                                      gggggATAGCCGAAAACCACCCGGAGAGCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAGGGCGGCGATCACAACAAGCCGGACGCCAAACCCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAt                                                                             <  1:722865/147‑1 (MQ=255)
                                                                       ggCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAtt                                                                            <  2:1284255/151‑1 (MQ=255)
                                                                        gCGATAGCCGAAAAACACCCGGAGATCGGCGCCGTACGCGGGCTGGGGGCGATGATCGCCATGGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAttc                                                                           <  1:1249964/151‑1 (MQ=255)
                                                                        gCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAtt                                                                            >  3:320834/1‑150 (MQ=255)
                                                                             aGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCAAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAttcttc                                                                        <  3:450123/149‑1 (MQ=255)
                                                                               ccGAAAAACCCCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTtctct                                                                     <  4:395334/150‑1 (MQ=255)
                                                                               ccGAAAAACCCCCGGAGACCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCAAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGAttctt                                                                         <  4:542130/146‑1 (MQ=255)
                                                                                  aaaaaCCCCCGGAGATCGGCGACGTCCGCGGGCTGGGGGCGATGATCGCCATGGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCt                                                                  <  2:354485/150‑1 (MQ=255)
                                                                                  aaaaaCACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCt                                                                  <  3:311001/150‑1 (MQ=255)
                                                                                  aaaaaCACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTg                                                                 >  3:579576/1‑151 (MQ=255)
                                                                                     aaCCCCCGGAGATCGGCGACGTCCGCGGGCTGGGGGCGATGAGCGCCATTGAGCTGTTTGAAGGCGGCGACCACAACAAGCGGGACGCCAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCgg                                                              <  1:1364035/151‑1 (MQ=255)
                                                                                        acCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGccc                                                           >  2:709653/1‑151 (MQ=255)
                                                                                         cccGGAGATCGGCGCCGTCCGCGGGTTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCCCCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGccc                                                           <  1:1408017/150‑1 (MQ=255)
                                                                                             gagaTCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTAtt                                                      >  2:778520/1‑151 (MQ=255)
                                                                                             gagaTCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTAtt                                                      >  2:687220/1‑151 (MQ=255)
                                                                                                 tCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACa                                                   >  2:399243/1‑150 (MQ=255)
                                                                                                  cGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAAc                                                 >  4:420505/1‑151 (MQ=255)
                                                                                                   ggCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACg                                                >  3:150041/1‑151 (MQ=255)
                                                                                                   ggCGACGTACGCGGGCTGGGGGCGATGACCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAAc                                                 <  1:594855/150‑1 (MQ=255)
                                                                                                      gACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGCCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGtg                                              >  1:327545/1‑150 (MQ=255)
                                                                                                       aCGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGtgc                                             >  4:121966/1‑150 (MQ=255)
                                                                                                        cGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGtgct                                            <  1:121934/150‑1 (MQ=255)
                                                                                                         gTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGtgctgc                                          >  2:535592/1‑151 (MQ=255)
                                                                                                           aCGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGGTAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTgcgc                                        >  1:614843/1‑151 (MQ=255)
                                                                                                           aCGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGGTTCTTCTCTCCTGCCGCCCGTATTACAACGATCTgcg                                         >  1:62704/1‑150 (MQ=255)
                                                                                                           aCGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTgcgc                                        >  2:1697381/1‑151 (MQ=255)
                                                                                                               gggCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATcc                                    <  2:1552012/151‑1 (MQ=255)
                                                                                                               gggCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATcc                                    >  4:221013/1‑151 (MQ=255)
                                                                                                               gggCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATc                                     <  4:472297/150‑1 (MQ=255)
                                                                                                                   tGGGGGCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGt                                >  3:477411/1‑151 (MQ=255)
                                                                                                                    gggggCGATGATCGCCATTGAGTTGTTGAAAGGCGGCGATCCCAACAACCCGGACGCCAAGCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTg                                 <  1:1626511/149‑1 (MQ=255)
                                                                                                                       ggCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCg                            <  2:1730142/151‑1 (MQ=255)
                                                                                                                        gCGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGc                           <  2:987471/151‑1 (MQ=255)
                                                                                                                         cGATGATCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCt                          >  2:147176/1‑151 (MQ=255)
                                                                                                                           atgatCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTc                         >  3:183851/1‑150 (MQ=255)
                                                                                                                           atgatCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAAATCACCGCCGAGATCGTGGCTCCCGCCCGTGATAAAGGCCTGATTCTTCTCCCCTGCGGCCCGTATTACCACGTGGTGCGCCTCCTTGTACCGCTc                         >  1:1204484/1‑150 (MQ=255)
                                                                                                                               tCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCAt                    >  4:338100/1‑151 (MQ=255)
                                                                                                                               tCGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCAt                    >  1:789824/1‑151 (MQ=255)
                                                                                                                                cGCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCAtt                   >  2:111725/1‑151 (MQ=255)
                                                                                                                                 gCCATTGAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTg                  >  1:439044/1‑151 (MQ=255)
                                                                                                                                       gAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGa              <  1:687120/149‑1 (MQ=255)
                                                                                                                                       gAGCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACCCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGa              <  1:1409728/149‑1 (MQ=255)
                                                                                                                                         gCTGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAACCTCTCCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCt          <  4:479325/151‑1 (MQ=255)
                                                                                                                                           tGTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTc         >  4:210014/1‑150 (MQ=255)
                                                                                                                                            gTTTGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTc         >  4:397340/1‑149 (MQ=255)
                                                                                                                                             tttGAAGGCGGCGATCCCAACAAGCCGGACGCCAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCa        <  1:1363600/149‑1 (MQ=255)
                                                                                                                                             tttGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAg       <  2:1554956/150‑1 (MQ=255)
                                                                                                                                              ttGAAGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCCCTCACCATTGAAGACGCTc         >  1:46007/1‑147 (MQ=255)
                                                                                                                                                 aaGGCGGCGATCACAACAAGCCGGACGCCAACCTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCg  <  1:1541238/151‑1 (MQ=255)
                                                                                                                                                 aaGGCGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCg  <  2:1494671/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
AAGGTGTTTGAGCAGGAAAATCTGCTGCAAAAAGCCAACGATCTGGGGCAGAAGTTGAAAGACGGATTGCTGGCGATAGCCGAAAAACACCCGGAGATCGGCGACGTACGCGGGCTGGGGGCGATGATCGCCATTGAGCTGTTTGAAGACGGCGATCACAACAAGCCGGACGCCAAACTCACCGCCGAGATCGTGGCTCGCGCCCGCGATAAAGGCCTGATTCTTCTCTCCTGCGGCCCGTATTACAACGTGCTGCGCATCCTTGTACCGCTCACCATTGAAGACGCTCAGATCCG  >  NC_000913/2793671‑2793966

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A