Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,196,367 |
A→T |
D129E (GAT→GAA) |
hldE ← |
heptose 7‑phosphate kinase and heptose 1‑phosphate adenyltransferase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,196,367 | 0 | A | T | 100.0%
| 518.2
/ NA
| 133 | D129E (GAT→GAA) | hldE | heptose 7‑phosphate kinase and heptose 1‑phosphate adenyltransferase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base T (51/82); total (51/82) |
Only 100 of 133 total aligned reads displayed.
TGGATCAATCAGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGATCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTCAGCGC > NC_000913/3196220‑3196513
|
tGGCTCAATCAGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTTGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTc > 1:422145/1‑150 (MQ=255)
caatcaGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAGAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACAcc < 1:1482754/151‑1 (MQ=255)
caatcaGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACAcc > 2:276187/1‑151 (MQ=255)
aatcaGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCt < 2:1383812/151‑1 (MQ=255)
gCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGaa < 2:316070/151‑1 (MQ=255)
gCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGa > 1:1249381/1‑150 (MQ=255)
cGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACct < 4:320131/151‑1 (MQ=255)
acacCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACcttctt > 1:1053139/1‑151 (MQ=255)
acacCCGCTTGACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACcttctt < 1:673811/151‑1 (MQ=255)
cacCCGCTTTACGCTCCAGTTGGATCATCTGCTGTTCGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAATCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAACCcttcta < 1:915361/150‑2 (MQ=255)
cccGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCaa < 4:181526/151‑1 (MQ=255)
cGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCaaaa < 2:123954/151‑1 (MQ=255)
cGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCaaaa < 2:1735941/151‑1 (MQ=255)
cTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATc > 1:250215/1‑151 (MQ=255)
tttACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATcc > 1:1430570/1‑151 (MQ=255)
ttACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATcc < 2:620731/150‑1 (MQ=255)
aCGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGa < 2:1318808/151‑1 (MQ=255)
cgcCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACgg < 1:1615451/151‑1 (MQ=255)
ccAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGAt > 1:853290/1‑151 (MQ=255)
cAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATc > 1:1308902/1‑151 (MQ=255)
cAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACACAGCGCCTGATTAATCCGCTCGGGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATc < 1:180857/151‑1 (MQ=255)
aGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATc > 1:460294/1‑150 (MQ=255)
aGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCa < 1:1214483/151‑1 (MQ=255)
ggATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCt < 1:1487938/150‑1 (MQ=255)
gATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTgt < 3:528996/151‑1 (MQ=255)
atcatcTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTgtt > 2:937695/1‑151 (MQ=255)
atcatcTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTgtt < 2:530994/151‑1 (MQ=255)
tgctgTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGc > 2:374046/1‑151 (MQ=255)
gTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCggg < 3:426103/150‑1 (MQ=255)
aCGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGaa < 4:318861/150‑1 (MQ=255)
aCGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGCTGGTTGCGGGaa > 1:557873/1‑150 (MQ=255)
cGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGaa > 4:487211/1‑149 (MQ=255)
cGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGaa > 2:897208/1‑149 (MQ=255)
cGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAg < 1:296428/151‑1 (MQ=255)
gCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGt > 1:1288861/1‑151 (MQ=255)
ttGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTAc > 2:37037/1‑151 (MQ=255)
ttGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTAc > 1:835373/1‑151 (MQ=255)
atGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTAc > 1:1146316/2‑151 (MQ=255)
tGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTa < 1:107209/149‑1 (MQ=255)
tGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTAc < 1:946048/150‑1 (MQ=255)
ccAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCg > 2:1510865/1‑151 (MQ=255)
cAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGt > 3:416635/1‑151 (MQ=255)
cAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGt > 2:1403952/1‑151 (MQ=255)
aGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTa < 1:233824/151‑1 (MQ=255)
cgcACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAAt < 1:1248104/151‑1 (MQ=255)
cgcACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAAt < 1:897094/151‑1 (MQ=255)
gcACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAAtt > 1:1151606/1‑151 (MQ=255)
aCCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTg < 2:381969/151‑1 (MQ=255)
ccTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTgg < 1:1163882/151‑1 (MQ=255)
cattGTCGTAGTCAGAAAGCACCAGCGCGCCAACCGAACTCAGCGCATGATTAATCCGCTCGTGCAGCGGTTGTTGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTAgg < 1:406108/148‑1 (MQ=255)
tGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTa < 2:1044428/149‑1 (MQ=255)
ggCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATg > 1:1472565/1‑151 (MQ=255)
gCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATgg < 1:676152/151‑1 (MQ=255)
cAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATg > 1:83231/1‑151 (MQ=255)
aGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGc < 3:483853/151‑1 (MQ=255)
gAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCg < 4:588405/151‑1 (MQ=255)
aaGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGCCTGCGGTTCAACACCTTCGAAACCTTCTTCAAATTCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTc < 1:1613283/151‑1 (MQ=255)
aGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCg < 1:1035688/151‑1 (MQ=255)
cACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCgg > 1:1554226/1‑150 (MQ=255)
aCCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTa < 2:1503708/151‑1 (MQ=255)
aGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTAc > 2:838759/1‑149 (MQ=255)
cgcgcCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGaa < 4:229275/151‑1 (MQ=255)
cgcgcCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGaa < 2:460369/151‑1 (MQ=255)
cgcCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAAc < 1:1398823/151‑1 (MQ=255)
cAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGaa < 2:1264432/151‑1 (MQ=255)
cAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGa > 1:326388/1‑150 (MQ=255)
aaTCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAg < 3:581641/151‑1 (MQ=255)
aaTCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAg < 3:264034/151‑1 (MQ=255)
aaTCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAg < 1:699458/151‑1 (MQ=255)
aTCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGt < 3:128559/151‑1 (MQ=255)
cGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTc < 1:212236/150‑1 (MQ=255)
cGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCg < 4:203357/151‑1 (MQ=255)
gAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGc > 2:1521460/1‑151 (MQ=255)
aaCTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCg > 2:518520/1‑149 (MQ=255)
aaCTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGc > 3:369890/1‑150 (MQ=255)
aCTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCAt < 1:946281/151‑1 (MQ=255)
cAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCAttt < 1:218078/150‑1 (MQ=255)
cgcCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATttgacg > 2:816964/1‑151 (MQ=255)
gcCTGATTAATCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATttgacgt < 1:1339232/151‑1 (MQ=255)
aaTCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTc < 2:107948/150‑1 (MQ=255)
aaTCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTc < 2:1317314/150‑1 (MQ=255)
aTCCGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCgg > 1:883669/1‑151 (MQ=255)
ccGCTCGTGCCGCGGCTGCCGTTCAACTCCTGCGAAGCCTTCTTCATAATCCAGACTGACCAGCTGTTGGTTCCGGCAGAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTc < 1:500535/147‑1 (MQ=255)
ccGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGcc < 1:17099/151‑1 (MQ=255)
ccGCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGcc > 1:580351/1‑151 (MQ=255)
gCTCGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGcc > 4:470934/1‑149 (MQ=255)
cGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCaga < 2:476449/149‑1 (MQ=255)
cGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCag > 2:726978/1‑148 (MQ=255)
cGTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAgaga < 2:810423/151‑1 (MQ=255)
gTGCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGAt < 4:339488/151‑1 (MQ=255)
gCAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGAttt < 1:1321277/151‑1 (MQ=255)
cAGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGAttt < 1:1091465/150‑1 (MQ=255)
aGCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTAc > 3:267758/1‑151 (MQ=255)
aGCGGCTGCGGTTCAACACCTTCGAAAACTTCTTCAAAATGCAGACGGATCAGCTGTTGGTTGCGGGAAAGAACCCGTAATTTGGTAATGGTCGGATGCGTCGGTGCAGAAACGAAGTCGCGTTTAACGTTGACGTGGGACAGAGATTTa > 1:992287/1‑150 (MQ=255)
gCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACt < 1:206976/151‑1 (MQ=255)
gCGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACt < 2:1113059/151‑1 (MQ=255)
cGGCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTc > 1:904889/1‑151 (MQ=255)
ggCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTCa < 2:1210845/151‑1 (MQ=255)
gCTGCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTc > 2:531791/1‑149 (MQ=255)
gCGGTTCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTCAgcgc < 2:1545951/151‑1 (MQ=255)
|
TGGATCAATCAGCACCGGAACACCCGCTTTACGCGCCAGTTGGATCATCTGCTGTACGCTTGCCAGCGCACCTTTGGCGTAGTCAGAAAGCACCAGCGCGCCAATCGAACTCAGCGCCTGATTAATCCGCTCGTGCAGCGGCTGCGGATCAACACCTTCGAAACCTTCTTCAAAATCCAGACGGATCAGCTGTTGGTTGCGGGAAAGTACCCGTAATTTGGTAATGGTCGGATGCGTCGGTACAGAAACGAAGTCGCATTTGACGTTGACGTCGGCCAGAGATTTACTCAGCGC > NC_000913/3196220‑3196513
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
