Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,831,329 |
A→G |
E291E (GAA→GAG) |
yicH → |
putative inner membrane‑anchored periplasmic AsmA family protein |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,831,329 | 0 | A | G | 99.0%
| 380.8
/ NA
| 102 | E291E (GAA→GAG) | yicH | putative inner membrane‑anchored periplasmic AsmA family protein |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base G (48/53); total (49/53) |
| Fisher's exact test for biased strand distribution p-value = 4.80e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 104 total aligned reads displayed.
TTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGG > NC_000913/3831181‑3831476
|
ttGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAggg > 2:1194370/1‑151 (MQ=255)
gcgcCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGc < 1:1125330/150‑1 (MQ=255)
cgcCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCa > 2:336358/1‑150 (MQ=255)
cgcCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCa > 1:128027/1‑150 (MQ=255)
cATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACt > 2:859507/1‑151 (MQ=255)
tACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTc > 1:404353/1‑151 (MQ=255)
aCGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTc < 4:433158/150‑1 (MQ=255)
aCGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTc < 3:437464/150‑1 (MQ=255)
aCGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCg > 1:406003/1‑151 (MQ=255)
cGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCg > 1:159531/1‑150 (MQ=255)
cGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGa < 2:485617/151‑1 (MQ=255)
cGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGa < 1:1739667/151‑1 (MQ=255)
gTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGaa < 2:176255/149‑1 (MQ=255)
gTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAAc > 1:398233/1‑150 (MQ=255)
gTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACg > 2:287810/1‑151 (MQ=255)
gTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACg > 3:568911/1‑151 (MQ=255)
tCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACg > 1:440913/1‑150 (MQ=255)
cccGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCt > 4:11049/1‑151 (MQ=255)
ccGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTa < 2:1655421/151‑1 (MQ=255)
ccGTCGTTGCAGATTGGTCACCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTa < 1:31294/151‑1 (MQ=255)
cgtcgtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCt > 1:809635/1‑149 (MQ=255)
cgtcgtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAg < 2:666931/151‑1 (MQ=255)
gtcgtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGc > 3:175270/1‑151 (MQ=255)
gtcgtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGc < 1:1565319/151‑1 (MQ=255)
cgtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCg > 1:148186/1‑150 (MQ=255)
gtTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAg < 3:349007/151‑1 (MQ=255)
ttGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGt > 4:409104/1‑151 (MQ=255)
tGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGtt > 1:979492/1‑151 (MQ=255)
gCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTc < 3:255759/151‑1 (MQ=255)
cAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTc > 2:1665624/1‑150 (MQ=255)
aTTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCAttt > 3:320054/1‑151 (MQ=255)
tGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTAt > 2:901915/1‑151 (MQ=255)
ggTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATg < 2:327696/151‑1 (MQ=255)
cGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGtt < 2:1371659/151‑1 (MQ=255)
gCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTc > 2:1207719/1‑151 (MQ=255)
ccTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCg > 3:470455/1‑151 (MQ=255)
cTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGAGAGTTCATTTATGGTTCGc > 1:1084337/1‑151 (MQ=255)
tGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCt > 1:1549035/1‑151 (MQ=255)
tGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCt > 2:795509/1‑151 (MQ=255)
ggAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGAAGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTg > 1:404133/1‑151 (MQ=255)
aaGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGc > 1:1301925/1‑150 (MQ=255)
aaGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGc > 2:581822/1‑150 (MQ=255)
aGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCat < 1:685948/151‑1 (MQ=255)
aGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCat < 1:1625213/151‑1 (MQ=255)
gATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCattt > 3:486228/1‑150 (MQ=255)
tCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCatttatt > 2:700392/1‑151 (MQ=255)
cGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCatttattt > 1:1699237/1‑151 (MQ=255)
cGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCg > 2:1623901/1‑150 (MQ=255)
cGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGa < 2:1169490/151‑1 (MQ=255)
tttGCAAGGTCCGGACTGGGCGGTGACCGGCCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGAccc < 4:433381/147‑1 (MQ=255)
ttGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGGTGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGAtt > 2:181173/1‑150 (MQ=255)
tGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATtat > 1:1075533/1‑151 (MQ=255)
gCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATtat < 4:372939/150‑1 (MQ=255)
gCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATtat < 2:1718967/150‑1 (MQ=255)
cAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATaa < 4:140951/151‑1 (MQ=255)
cAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATaa < 1:1454770/151‑1 (MQ=255)
aaGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATaa > 1:416251/1‑150 (MQ=255)
ggTCCGGACTGGGCGGTGACCGACCCCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAaca < 2:1293238/151‑1 (MQ=255)
gTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAacac > 2:1238926/1‑151 (MQ=255)
ccGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACgg > 1:282710/1‑151 (MQ=255)
ggACTGGGCGGTGACCGTCCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGa < 1:431391/150‑1 (MQ=255)
ggACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGaa < 4:320551/151‑1 (MQ=255)
gACTGGGCGGTGAACGGGCTCAATATCAGCTTGCGCAACATGACCCTCAGGAAAGATGGCTGGCAGACGAAGGAGGGCAAATTGTCGATGAACGCTAGCGAGTTCAGTTATGGTTCGCTGCCTTTAATTGGCCCGATTATaaccttggaa < 1:1049983/150‑9 (MQ=255)
gggCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACGGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTc > 1:1514065/1‑151 (MQ=255)
gCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTccc < 2:257359/151‑1 (MQ=255)
gCGGAGACCGACCTCGATCTCATCTTGCGCAACATGACTTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACAGTCGTTGAACGCTAGCGAGCTCATTTATGGTTCTCTGCATTTATTTGACCCGATTATAAACACGGAATTTTccc > 1:239024/1‑151 (MQ=255)
ggTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCg > 4:450853/1‑151 (MQ=255)
gTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGc > 2:287663/1‑151 (MQ=255)
accgaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAgg > 1:757813/1‑151 (MQ=255)
ccgaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAggg < 1:1348006/151‑1 (MQ=255)
ccgaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAgg < 1:837637/150‑1 (MQ=255)
ccgaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTAGTTGACCCGATTATAAACACGGAATTTTCCCCGCAgg < 3:136444/150‑1 (MQ=255)
gaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCg < 2:1621163/151‑1 (MQ=255)
gaccTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCg < 2:610720/151‑1 (MQ=255)
cAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAgcg < 2:516951/145‑1 (MQ=255)
tGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGtt > 1:113618/1‑151 (MQ=255)
tGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGt < 2:758243/150‑1 (MQ=255)
gcgcAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGtt < 3:409124/150‑1 (MQ=255)
gcgcAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGtt > 1:1335161/1‑150 (MQ=255)
cAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCAcc > 1:1113931/1‑151 (MQ=255)
ccTTCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCt < 2:1058556/150‑1 (MQ=255)
ttCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTggg > 2:1697446/1‑151 (MQ=255)
tCAGTAAATATGCCTGGCACACACAGAAGGCCACAGTATCGATGAACGATAGCGGGTGCATTTATGGTTCGCTGCATTTATTTGACCCGTTTATAAACACGGAATTTTCCGCGCAGAGCATAACGCTACGCCAGTTAACCAGACGCgggg < 1:655637/150‑1 (MQ=255)
tCAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTggg < 1:287769/150‑1 (MQ=255)
cAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGaa < 3:200672/151‑1 (MQ=255)
cAGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGa < 1:1030104/150‑1 (MQ=255)
aGTAAAGATGGCTGGCGGGCACAGGAGGGCAAACTGTCGATGAGCGCTAGCGCGTACTTTTATGCTTCGCTGGTTTTATTTGACCCGATTATAAACACGGCATTTTCCCCGCAGGGCGTCGCGCTGCGCCAGTTCACCAGAGGCTGGGaa < 1:126744/150‑1 (MQ=255)
aGTAAAGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCCTTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACCCGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGaa < 1:183743/150‑1 (MQ=255)
aaaGATGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAgggg > 3:266764/1‑151 (MQ=255)
aTGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTAt < 1:859395/151‑1 (MQ=255)
aTGACTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTAt < 3:349532/151‑1 (MQ=255)
cTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGt < 1:1088428/150‑1 (MQ=255)
cTGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATGTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGt < 4:140232/150‑1 (MQ=255)
tGGCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTc > 1:1595252/1‑150 (MQ=255)
ggCAGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCa < 3:379505/150‑1 (MQ=255)
aGACACAGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAAc < 1:520572/151‑1 (MQ=255)
cacaGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTc > 2:1071275/1‑151 (MQ=255)
caGGAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGATGGGAAGGGGGTATGGTCAGAACGTCa < 2:406064/150‑1 (MQ=255)
aggaggGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAgg > 3:315828/1‑151 (MQ=255)
ggAGGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAggg < 2:1084469/151‑1 (MQ=255)
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TTGCGCCATTACGCTCTGTCCCGTCGTTGCAGATTGGTCGCCTGGAAGTGATCGATGCTCGTTTGCAAGGTCCGGACTGGGCGGTGACCGACCTCGATCTCAGCTTGCGCAACATGACCTTCAGTAAAGATGACTGGCAGACACAGGAAGGCAAACTGTCGATGAACGCTAGCGAGTTCATTTATGGTTCGCTGCATTTATTTGACCCGATTATAAACACGGAATTTTCCCCGCAGGGCGTAGCGCTGCGCCAGTTCACCAGCCGCTGGGAAGGGGGTATGGTCAGAACGTCAGGG > NC_000913/3831181‑3831476
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
