Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F50 I1 R1
|
144 |
141.8 |
4677362 |
93.6% |
4378010 |
150.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
3,920,989 |
A→T |
A67A (GCT→GCA) |
atpE ← |
F0 sector of membrane‑bound ATP synthase, subunit c |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 3,920,989 | 0 | A | T | 99.4%
| 692.6
/ ‑3.8
| 171 | A67A (GCT→GCA) | atpE | F0 sector of membrane‑bound ATP synthase, subunit c |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (91/79); total (92/79) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.05e-01 |
Only 100 of 171 total aligned reads displayed.
AGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCC > NC_000913/3920842‑3921133
|
aGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCg < 2:1697418/151‑1 (MQ=255)
ggACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCg > 3:561902/1‑150 (MQ=255)
gACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGat > 1:53334/1‑151 (MQ=255)
aaaCGCGATGGCCTGGCCGAGGGGTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGatca > 1:473760/1‑150 (MQ=255)
aCGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCg < 1:1684374/151‑1 (MQ=255)
gcgATGGCCTGGCCGAGGATTGTTGCGTTAAGGTTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCggg > 1:602042/1‑151 (MQ=255)
gcgATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCggg < 3:1372/151‑1 (MQ=255)
cgATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGa < 2:59198/151‑1 (MQ=255)
tggcctggccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGAt > 3:236247/1‑149 (MQ=255)
gcctggccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCa < 2:1223637/151‑1 (MQ=255)
cctggccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCAt < 2:884030/151‑1 (MQ=255)
ccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATccacc > 1:978640/1‑151 (MQ=255)
ccGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATccacc > 2:1314341/1‑151 (MQ=255)
cGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATccacc > 1:345353/1‑150 (MQ=255)
ggATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGAc > 1:510870/1‑151 (MQ=255)
ggATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGAAATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGGCAGCGAACATCACGTGCAGACCCAGTCCTACTGCGATCATCGGGGTAACATCCACCAGAc < 1:768244/151‑1 (MQ=255)
gATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGAc < 4:63799/150‑1 (MQ=255)
gttgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTCACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCAt > 3:319161/1‑150 (MQ=255)
tgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATaa < 2:1338564/150‑1 (MQ=255)
tgCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAAc > 1:59406/1‑151 (MQ=255)
cGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACg > 4:377652/1‑150 (MQ=255)
gTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGAt > 4:334285/1‑151 (MQ=255)
tAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATa < 1:1244430/150‑1 (MQ=255)
aaGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATaa < 1:1067507/150‑1 (MQ=255)
cacaGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACt < 2:44115/150‑1 (MQ=255)
cacaGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACt < 2:1088632/150‑1 (MQ=255)
caGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTg > 3:556314/1‑149 (MQ=255)
caGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTg > 1:1414895/1‑149 (MQ=255)
aGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGt > 2:1169137/1‑151 (MQ=255)
gCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACt < 1:1637002/146‑1 (MQ=255)
acaATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACg > 1:423973/1‑151 (MQ=255)
caATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgc > 1:197990/1‑151 (MQ=255)
aTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcag < 4:87975/151‑1 (MQ=255)
aTGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgc > 1:858771/1‑149 (MQ=255)
tGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagc > 1:250722/1‑151 (MQ=255)
gCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca < 2:1725095/151‑1 (MQ=255)
gCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca < 1:1257762/151‑1 (MQ=255)
gCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACgcagca < 1:1584810/151‑1 (MQ=255)
aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCagag < 2:1682122/148‑1 (MQ=255)
aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGa > 1:592985/1‑150 (MQ=255)
aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGa > 4:418493/1‑150 (MQ=255)
aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGa < 2:1389722/150‑1 (MQ=255)
aTTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGa > 3:132253/1‑150 (MQ=255)
ttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatc > 4:125702/1‑151 (MQ=255)
ttAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACAAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatc > 2:982934/1‑151 (MQ=255)
tAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatc < 2:787188/150‑1 (MQ=255)
tAGTTAACGTGCTGATATTGCTCGTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATATCAATAAAGACCTGAGTACGCAGCAGGGGAatc < 1:810779/150‑1 (MQ=255)
aGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcag < 2:510951/151‑1 (MQ=255)
gTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATC‑‑CCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcaga < 1:799250/149‑1 (MQ=255)
tAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatc > 2:291015/1‑146 (MQ=255)
aaCGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAatcagatc > 1:173213/1‑150 (MQ=255)
cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAgg > 2:914428/1‑151 (MQ=255)
cGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAgg > 2:3229/1‑151 (MQ=255)
tCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGtt < 2:558085/150‑1 (MQ=255)
cTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTg > 1:1613991/1‑150 (MQ=255)
tGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGa > 1:672011/1‑150 (MQ=255)
atatTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgc > 1:387744/1‑151 (MQ=255)
atatTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACATACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgc > 4:41426/1‑151 (MQ=255)
ttGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGAcgcg > 2:1567333/1‑149 (MQ=255)
tGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCt < 1:1433209/150‑1 (MQ=255)
tGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTg > 2:441578/1‑151 (MQ=255)
ctctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTgcg > 2:1219484/1‑151 (MQ=255)
ctTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGcc > 2:1632873/1‑151 (MQ=255)
ttAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCtt > 2:1482018/1‑151 (MQ=255)
aataaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTcc > 2:1185956/1‑150 (MQ=255)
taaaAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAgg > 2:1120205/1‑151 (MQ=255)
aaaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAgg > 1:668210/1‑150 (MQ=255)
aaaaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGa < 1:427824/151‑1 (MQ=255)
aaGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAAt > 4:310785/1‑151 (MQ=255)
cAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAAttt < 1:1107688/150‑1 (MQ=255)
aCGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAcc > 3:410016/1‑151 (MQ=255)
cGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccc > 2:464578/1‑151 (MQ=255)
cGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccc < 3:187030/151‑1 (MQ=255)
gCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAcccc > 4:164194/1‑151 (MQ=255)
cTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccccc > 3:282669/1‑151 (MQ=255)
ttACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCg > 2:1104041/1‑151 (MQ=255)
tactacGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTAccccc < 3:143217/149‑1 (MQ=255)
actacGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGa < 2:544028/150‑1 (MQ=255)
tacGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg > 1:1174004/1‑150 (MQ=255)
acGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGatg < 1:1486583/149‑3 (MQ=255)
acGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg < 2:710978/149‑1 (MQ=255)
acGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg < 1:31571/149‑1 (MQ=255)
acGCGACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAgg < 1:626615/149‑1 (MQ=255)
cgcgACAGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATg > 2:1546808/1‑151 (MQ=255)
aGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCg < 2:1555765/148‑1 (MQ=255)
aGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCg > 1:1555606/1‑148 (MQ=255)
aGCGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGAt > 1:565346/1‑150 (MQ=255)
cGAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATAcc < 4:48043/151‑1 (MQ=255)
gAACATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCg < 2:1039194/151‑1 (MQ=255)
aaCATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGa < 2:501773/151‑1 (MQ=255)
aCATCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGAt > 2:622309/1‑151 (MQ=255)
tCACGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgc > 1:243004/1‑151 (MQ=255)
aCGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgcag < 1:532868/151‑1 (MQ=255)
aCGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgc > 2:139599/1‑149 (MQ=255)
aCGTACAGACCCAGACCTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCgc > 2:712467/1‑149 (MQ=255)
cccagaccTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTg < 2:276232/151‑1 (MQ=255)
ccagaccTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgc < 2:427958/151‑1 (MQ=255)
agaccTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgccg < 2:521208/151‑1 (MQ=255)
agaccTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgccg < 4:377131/151‑1 (MQ=255)
accTACTGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTgccgcc > 3:71611/1‑151 (MQ=255)
|
AGGACAAACGCGATGGCCTGGCCGAGGATTGTTGCGTTAAGATTCACAGCACAATGCCTCTATTTAGTTAACGTTCTGATATTGCTCTTTAAATAAAAGCAACGCTTACTACGCGACAGCGAACATCACGTACAGACCCAGACCTACAGCGATCATCGGGATAGCATCCACCAGACCCATAACGATAAAGAACTGAGTACGCAGCAGAGGAATCAGATCAGGTTGACGCGCTGCGCCTTCCAGGAATTTACCCCCGAGGATGCCGATACCGATCGCAGCACCGATTGCCGCC > NC_000913/3920842‑3921133
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
