Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I3 R1
|
143 |
109.6 |
3434427 |
98.5% |
3382910 |
150.4 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
4,027,819 |
A→G |
C318C (TGT→TGC) |
fadA ← |
3‑ketoacyl‑CoA thiolase (thiolase I) |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 4,027,819 | 0 | A | G | 97.7%
| 303.4
/ ‑3.6
| 86 | C318C (TGT→TGC) | fadA | 3‑ketoacyl‑CoA thiolase (thiolase I) |
| Reads supporting (aligned to +/- strand): ref base A (1/1); new base G (43/41); total (44/42) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.56e-01 |
CAAACTGAACGTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATACATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCGCCATC > NC_000913/4027671‑4027966
|
cAAACTGAACGTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCa < 1:1494507/151‑1 (MQ=255)
gAACGTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCa < 1:606702/150‑1 (MQ=255)
aaCGTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAgg < 1:1574821/151‑1 (MQ=255)
gTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATc > 1:277920/1‑151 (MQ=255)
cTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTg > 2:486257/1‑151 (MQ=255)
tttGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTgc > 1:418015/1‑151 (MQ=255)
ttGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTgcg > 1:101625/1‑151 (MQ=255)
ttGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTg < 2:268286/149‑1 (MQ=255)
gTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGc < 2:1078000/151‑1 (MQ=255)
gTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGc > 1:498499/1‑151 (MQ=255)
ttCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGc > 1:1184870/1‑150 (MQ=255)
ttCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGc > 2:874543/1‑150 (MQ=255)
tCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCa > 2:1388877/1‑150 (MQ=255)
ccATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCaaa < 1:766454/151‑1 (MQ=255)
ccATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCaaa < 2:1703198/151‑1 (MQ=255)
cATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCaa > 1:629010/1‑149 (MQ=255)
aTCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGGTCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAgg > 2:1315744/1‑151 (MQ=255)
aTCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAgg > 2:1446280/1‑151 (MQ=255)
gATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTc > 2:1536371/1‑151 (MQ=255)
gATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTc < 2:1172359/151‑1 (MQ=255)
gATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTc < 1:445177/151‑1 (MQ=255)
ttCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGACCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑t > 1:751434/1‑151 (MQ=255)
tCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑tt > 2:1132474/1‑151 (MQ=255)
tCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑t < 2:1630988/150‑1 (MQ=255)
tCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑t < 1:509389/150‑1 (MQ=255)
cagcagCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTc > 1:856129/1‑151 (MQ=255)
gcagcGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCAt < 2:742559/151‑1 (MQ=255)
cagcGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCa < 1:1320504/149‑1 (MQ=255)
cagcGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCa > 2:1320599/1‑149 (MQ=255)
gcGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGAt > 2:1527509/1‑124 (MQ=255)
gcGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGAt < 1:1527412/124‑1 (MQ=255)
gtggtgCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCa > 1:1288475/1‑150 (MQ=255)
ggtgCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAac < 2:1567671/151‑1 (MQ=255)
ggtgCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAac < 1:455774/151‑1 (MQ=255)
aTACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGa < 1:1634665/151‑1 (MQ=255)
aCGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGat > 2:1511254/1‑150 (MQ=255)
gcgcACCGGACCACCCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATc < 1:1021260/151‑1 (MQ=255)
gcgcACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATc > 1:268313/1‑151 (MQ=255)
cgcACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCg > 2:30357/1‑151 (MQ=255)
gcACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCg < 2:176341/150‑1 (MQ=255)
cACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCt > 1:893216/1‑151 (MQ=255)
cACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCt > 1:593342/1‑151 (MQ=255)
cACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCt > 1:34802/1‑151 (MQ=255)
ccGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCAGGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTg < 2:41939/150‑1 (MQ=255)
aacaacCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAg < 1:1647145/150‑1 (MQ=255)
acaacCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGaa < 2:1623411/151‑1 (MQ=255)
aacCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGaaa < 1:758598/150‑1 (MQ=255)
cccAGGGGATGACCCAGGGCGATCGCGCCACGGTTAAGGTTGATTTTCTCGTCAATCTGTTCAATTAGTCCCAGGTCTTTAATGCTTGGCAGAATGAGCGCGGCAAAGG‑TTCGTTTCATTCCAAACACGCCGATATCGCTGGCAGAAAGc < 1:1673402/150‑1 (MQ=255)
cccAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGcc < 2:631205/151‑1 (MQ=255)
cGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCt < 2:33348/151‑1 (MQ=255)
cGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCt > 2:1570030/1‑151 (MQ=255)
cGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGCCCCAGATCTTTAATGCAGGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCg < 2:855025/149‑1 (MQ=255)
aTGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCttt < 2:156393/150‑1 (MQ=255)
gACCCAGCGCGATCGCGCCCCCTTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGTATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCtttttt < 2:377048/151‑1 (MQ=255)
aCCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTc > 2:809319/1‑151 (MQ=255)
ccaaGCGCGATCGCGACACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCa < 1:1221359/148‑1 (MQ=255)
ccAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTc > 2:449323/1‑149 (MQ=255)
ccAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATACATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTACAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAg < 1:442659/151‑1 (MQ=255)
accgcgCCACCGTTGAGTTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCT‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGtt < 2:1518602/149‑1 (MQ=255)
cgcgCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGttt < 1:579302/150‑1 (MQ=255)
cgcgCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGttt < 1:694047/150‑1 (MQ=255)
cgcCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCg > 2:1246131/1‑150 (MQ=255)
cgcCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGa < 1:1049171/151‑1 (MQ=255)
ccACCGTTGAGGTTGATTTTCCCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGCCGGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAACCACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTc < 1:912932/147‑1 (MQ=255)
cGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCgg > 2:1301703/1‑151 (MQ=255)
gTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGa < 2:781105/151‑1 (MQ=255)
tGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAAc > 1:84589/1‑151 (MQ=255)
gTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCggg > 2:1010821/1‑151 (MQ=255)
gTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCggg > 2:965293/1‑151 (MQ=255)
gATCTTCTCGTCAATCGGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCGGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGATGCCGGAACCGGGcc < 1:883680/150‑1 (MQ=255)
aTCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGt > 2:1497483/1‑151 (MQ=255)
tcGTCAATCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAAccc > 1:1619985/1‑150 (MQ=255)
aaTCTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATc > 2:1382997/1‑151 (MQ=255)
cTGCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGAt > 2:63787/1‑151 (MQ=255)
gCTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATg < 1:934399/150‑1 (MQ=255)
cTCAATTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATggg > 2:969926/1‑151 (MQ=255)
aaTTAGTCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTc > 1:826517/1‑150 (MQ=255)
aaTTAGTCCCAGATCTTTAATACATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTc > 1:1215426/1‑150 (MQ=255)
tCCCAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCAcaacc > 1:885631/1‑150 (MQ=255)
cccAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCAcaaccaa < 2:751495/151‑1 (MQ=255)
cccAGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCAcaaccaa < 1:1446182/151‑1 (MQ=255)
aGATCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACg > 1:1079267/1‑150 (MQ=255)
tCTTTAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCg > 1:1234006/1‑151 (MQ=255)
ttAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCGcc > 2:80710/1‑150 (MQ=255)
ttAATGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCGc < 1:809253/149‑1 (MQ=255)
aaTGCATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCGCCATc > 2:1190633/1‑151 (MQ=255)
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CAAACTGAACGTCTTTGCGTTCCATCAGATTCAGCAGCGTGGTGCTGATACGCGCACCGGAACAACCCAGCGGATGACCCAGCGCGATCGCGCCACCGTTGAGGTTGATCTTCTCGTCAATCTGCTCAATTAGTCCCAGATCTTTAATACATGGCAGGATCTGCGCGGCAAAGGCTTCG‑TTCATTTCAAACACGCCGATATCGCTGGCAGAAAGCCCCGCTTTTTTCAGCGCCAGTTTCGAGGCCGGAACCGGGCCGTAACCCATAATCGATGGGTCACAACCAACGACCGCCATC > NC_000913/4027671‑4027966
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
