Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A1 F50 I2 R1
|
121 |
82.0 |
2593086 |
97.7% |
2533445 |
150.3 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
NC_000913 |
2,695,585 |
(G)7→8 |
intergenic (‑42/‑216) |
purL ← / → mltF |
phosphoribosylformyl‑glycineamide synthetase/membrane‑bound lytic transglycosylase F, murein hydrolase |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | NC_000913 | 2,695,578 | 1 | . | G | 89.9%
| 228.6
/ 21.1
| 69 | intergenic (‑35/‑223) | purL/mltF | phosphoribosylformyl‑glycineamide synthetase/membrane‑bound lytic transglycosylase F, murein hydrolase |
| Reads supporting (aligned to +/- strand): ref base . (4/3); new base G (29/33); total (33/36) |
| Fisher's exact test for biased strand distribution p-value = 7.02e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-02 |
GGACATACTCGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCAAAATGCC > NC_000913/2695429‑2695723
|
ggACATACTCGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑aa < 1:408921/150‑1 (MQ=255)
aTACTCGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑g‑gggg < 1:901999/151‑1 (MQ=255)
aCTCGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑g‑gggtg < 1:694565/150‑3 (MQ=255)
cTCGGCGTAAATATTGTGAACCGGTAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTGGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑GA‑g‑gggga < 1:748500/149‑2 (MQ=255)
cGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑g‑ggggg‑gga > 1:32064/1‑148 (MQ=255)
cGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑Ggaa < 1:403392/151‑1 (MQ=255)
ggCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑Ggaa > 2:1080218/1‑150 (MQ=255)
gCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑Ggaaac < 2:261873/151‑3 (MQ=255)
gCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑Ggaaac > 2:598924/1‑149 (MQ=255)
gTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACgg < 1:82106/151‑1 (MQ=255)
gTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACg < 2:1268447/150‑1 (MQ=255)
aaaTATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGc < 2:1052128/151‑1 (MQ=255)
aaTATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCg > 2:1092659/1‑151 (MQ=255)
aaTATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCg > 1:761608/1‑151 (MQ=255)
aaCCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATaa < 1:367374/151‑1 (MQ=255)
aCCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATaaa < 2:1227921/151‑1 (MQ=255)
aGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCCAAA‑G‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCt > 1:953690/1‑151 (MQ=255)
aGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCt < 1:491688/151‑1 (MQ=255)
aGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCt < 1:276322/151‑1 (MQ=255)
aGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCt < 2:1211159/151‑1 (MQ=255)
gCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTg > 2:683575/1‑151 (MQ=255)
ccTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTg < 1:418426/150‑1 (MQ=255)
ccTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGa < 2:930983/151‑1 (MQ=255)
gAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGaa < 2:1261152/149‑2 (MQ=255)
gAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACg < 2:477152/150‑1 (MQ=255)
aaaaCGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaa < 2:361755/151‑1 (MQ=255)
aaaCGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGaaa < 2:121224/151‑1 (MQ=255)
cagcagTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGc < 2:281575/151‑1 (MQ=255)
tttGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGa > 2:876063/1‑150 (MQ=255)
ttgATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATa < 1:549520/150‑1 (MQ=255)
tgATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa > 1:598860/1‑150 (MQ=255)
tgATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATaa > 1:922737/1‑150 (MQ=255)
tCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATc < 2:1012859/150‑1 (MQ=255)
cGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAc > 1:709436/1‑151 (MQ=255)
ggAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAcc > 2:105695/1‑151 (MQ=255)
gAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCAcc > 2:679408/1‑150 (MQ=255)
tGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCg > 2:544905/1‑151 (MQ=255)
gCCGACAGTGCATGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGGTGAAACGGGAGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTGTGCGTGGAAATAAAATCACCATc < 1:1291549/149‑1 (MQ=255)
ccGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTg > 1:706839/1‑151 (MQ=255)
gccAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTg > 2:1199862/3‑149 (MQ=255)
aGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAAtt > 2:1074887/1‑150 (MQ=255)
gTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAg < 1:1279754/151‑1 (MQ=255)
gCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGc > 1:945883/1‑150 (MQ=255)
gCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGc > 2:796944/1‑150 (MQ=255)
gCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCa < 1:421319/151‑1 (MQ=255)
cAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCaa < 2:815877/151‑1 (MQ=255)
cAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCa > 1:413984/1‑150 (MQ=255)
ggCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcg < 1:1092618/151‑1 (MQ=255)
cGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcgc > 1:987362/1‑150 (MQ=255)
cGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAAcgc > 2:305995/1‑150 (MQ=255)
gAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGt < 1:827891/151‑1 (MQ=255)
aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTg > 1:1014860/1‑151 (MQ=255)
aaCCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTg > 1:415877/1‑151 (MQ=255)
cACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgccg < 2:321088/151‑1 (MQ=255)
aCGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTgccgc > 1:375514/1‑151 (MQ=255)
aGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAt < 2:923404/151‑1 (MQ=255)
aGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAAt > 2:244665/1‑151 (MQ=255)
tttCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCt > 2:1230187/1‑151 (MQ=255)
ccATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTg > 1:642370/1‑149 (MQ=255)
atcatAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCTCTGACGAAACCGTTTGCGTGGAAATAAAATCGCCATCGTGAATTAGCAACGGGTGCCGCCAATGGCTGtaa < 1:344024/150‑1 (MQ=255)
aaGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGtt > 1:33801/1‑151 (MQ=255)
aaGTCGCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGtt < 1:1283893/151‑1 (MQ=255)
aGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTg < 2:819482/151‑1 (MQ=255)
tcGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCt > 1:1014302/1‑151 (MQ=255)
cGTCTTCTAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTg < 1:897066/151‑1 (MQ=255)
ttctCAGCTTTCGGTGTACCC‑AA‑GCGGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGAGTGGAAATAAAATCACCATCGTGAATTAGCAACCCGTCCCGCCAATGGCTGTAATAAGTTGCCATCTGgcgc > 1:465743/1‑151 (MQ=255)
tAAGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAgg > 2:735612/1‑151 (MQ=255)
aaGCTTTCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGt < 2:1162400/151‑1 (MQ=255)
tCGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGc > 1:552586/1‑151 (MQ=255)
cGGTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCa < 1:120300/151‑1 (MQ=255)
ggTGTACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCaa < 1:1216504/151‑1 (MQ=255)
gtACCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCAAAAt < 1:598893/151‑1 (MQ=255)
aCCC‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCAAAATGc > 2:294594/1‑151 (MQ=255)
ccc‑AAGG‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCAAAATGcc < 2:1098488/151‑1 (MQ=255)
|
GGACATACTCGGCGTAAATATTGTGAACCGGGAGCCTGGCAGCCTGAAAACGTGCCAGCAGTTTGTTGATTCGGAATGCCGACAGTGCAGGCGAACCACGCAGAATTTCCATCATAAGTCTCTCGTCTTCTAAGCTTTCGGTGTACCC‑AA‑G‑GGGGG‑GAAACGGGCGTCATTATAAAGAATCTGATGCGCTGACGAAACCGTTTGCGTGGAAATAAAATCACCATCGTGAATTAGCAACGCGTGCCGCCAATGGCTGTAATAAGTTGCCATCTGGCGCAGGTTTACGCAAAATGCC > NC_000913/2695429‑2695723
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 16 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
