Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A1 F50 I2 R1 121 82.0 2593086 97.7% 2533445 150.3

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 2,704,781 A→G C177R (TGT→CGT)  lepB ← leader peptidase (signal peptidase I)

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009132,704,7810AG100.0% 227.7 / NA 64C177R (TGT→CGT) lepBleader peptidase (signal peptidase I)
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (33/31);  total (33/31)

GGAAAGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACACGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCG  >  NC_000913/2704635‑2704928
                                                                                                                                                  |                                                                                                                                                   
ggAAAGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGcc                                                                                                                                                 >  2:1209337/1‑151 (MQ=255)
  aaaGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCCCGCGCCTg                                                                                                                                               >  2:33963/1‑151 (MQ=255)
  aaaGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCt                                                                                                                                                >  1:749674/1‑150 (MQ=255)
  aaaGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTg                                                                                                                                               >  2:942540/1‑151 (MQ=255)
    aGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGc                                                                                                                                             >  2:359098/1‑151 (MQ=255)
     gACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGcc                                                                                                                                            <  2:352522/151‑1 (MQ=255)
        gAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCgg                                                                                                                                          >  2:660438/1‑150 (MQ=255)
         aaTTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGa                                                                                                                                         >  1:895823/1‑150 (MQ=255)
            tCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACt                                                                                                                                      <  1:41720/150‑1 (MQ=255)
             ccATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTg                                                                                                                                     <  1:760906/150‑1 (MQ=255)
             ccATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGGCTGAACGAAATCTCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCCTTTTCACGCACCTTGCCGGAACTGc                                                                                                                                    >  1:1251853/1‑151 (MQ=255)
                  ttCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATTGCTCGGTTACACGTTTGAGTAGGTGACCGGCCGCGCGTTTTTACGCGCCTGGCAGGAAATGCATccc                                                                                                                               >  2:334277/1‑151 (MQ=255)
                   tCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATccc                                                                                                                               <  1:1010391/150‑1 (MQ=255)
                      ttGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCg                                                                                                                              <  1:592688/148‑1 (MQ=255)
                      ttGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCg                                                                                                                              <  2:984586/148‑1 (MQ=255)
                      ttGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGt                                                                                                                            <  1:139153/150‑1 (MQ=255)
                         gTTTCGTTTTTCGGCACTACAAAGAATCCGCTGGTCGCTTCACCACCATTACGGCGTGAGAAGGTCTGACCGAAAGCGCTCGGCTCTAAGTTTTCGTAGGTGACCCGCAGCGCGTTTTCTCGCGCCTGGGCGGAAATGCATCCCGGTTg                                                                                                                          >  1:878165/1‑149 (MQ=255)
                            tCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATc                                                                                                                      <  2:932842/150‑1 (MQ=255)
                                ttttCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTc                                                                                                                   >  1:666585/1‑149 (MQ=255)
                                ttttCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTc                                                                                                                   >  2:225938/1‑149 (MQ=255)
                                  ttCGGCACTTCAAATAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGGGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAAATGCATCCCGGTTGAATCGTCAGct                                                                                                               >  2:142122/1‑151 (MQ=255)
                                  ttCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGc                                                                                                                <  2:839196/150‑1 (MQ=255)
                                   tCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGctc                                                                                                              >  2:157384/1‑151 (MQ=255)
                                    cGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGGGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGctct                                                                                                             >  1:956662/1‑151 (MQ=255)
                                     ggCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCtt                                                                                                            >  2:1116946/1‑151 (MQ=255)
                                       cACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCtttt                                                                                                          <  2:1174635/151‑1 (MQ=255)
                                         cTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCtttt                                                                                                          >  1:684434/1‑149 (MQ=255)
                                             aaaGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGAcc                                                                                                    >  2:1289783/1‑151 (MQ=255)
                                               aGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCgg                                                                                                  >  1:877095/1‑151 (MQ=255)
                                                gAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCgg                                                                                                  >  2:122360/1‑150 (MQ=255)
                                                 aaTCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGGGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGAt                                                                                                >  1:971194/1‑151 (MQ=255)
                                                  aTCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATc                                                                                               <  1:70670/151‑1 (MQ=255)
                                                    ccGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCg                                                                                              >  1:1092605/1‑150 (MQ=255)
                                                      gCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCGCGGTTCCCCGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTa                                                                                            <  1:386838/150‑1 (MQ=255)
                                                             gCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACtt                                                                                    <  2:335195/151‑1 (MQ=255)
                                                             gCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACtt                                                                                    <  2:199808/151‑1 (MQ=255)
                                                               ttCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCCTCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACttt                                                                                   >  1:911622/1‑150 (MQ=255)
                                                               ttCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACttt                                                                                   >  1:639536/1‑150 (MQ=255)
                                                               ttCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACttt                                                                                   >  1:118337/1‑150 (MQ=255)
                                                               ttCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACttt                                                                                   >  1:921912/1‑150 (MQ=255)
                                                                tCCCCTCCACTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCCGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTa                                                                                  <  1:1267752/150‑1 (MQ=255)
                                                                 ccccACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATc                                                                                >  1:621645/1‑151 (MQ=255)
                                                                   ccaccaTTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTAt                                                                                 <  2:878205/148‑1 (MQ=255)
                                                                   ccaccaTTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGc                                                                              <  2:1012539/151‑1 (MQ=255)
                                                                        aTTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGt                                                                         <  1:1170749/151‑1 (MQ=255)
                                                                          tACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTa                                                                        <  2:463637/150‑1 (MQ=255)
                                                                                 tGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCAcc                                                                >  1:901906/1‑151 (MQ=255)
                                                                                   agaAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACcgc                                                              >  2:172210/1‑151 (MQ=255)
                                                                                            gAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGAt                                                     <  1:771239/151‑1 (MQ=255)
                                                                                            gAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGAt                                                     <  2:1244545/151‑1 (MQ=255)
                                                                                                gAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTa                                                  >  2:729702/1‑150 (MQ=255)
                                                                                                    tCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCa                                              >  2:540397/1‑150 (MQ=255)
                                                                                                         cGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCttt                                        <  1:752880/151‑1 (MQ=255)
                                                                                                         cGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCtt                                         <  2:1228675/150‑1 (MQ=255)
                                                                                                         cGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCtt                                         <  2:1096368/150‑1 (MQ=255)
                                                                                                               cACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCt                                  <  2:1015823/151‑1 (MQ=255)
                                                                                                                      gAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGat                           >  2:917557/1‑151 (MQ=255)
                                                                                                                      gAGTAGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGa                            <  2:1014223/150‑1 (MQ=255)
                                                                                                                          aGGTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATAttt                       <  2:275040/151‑1 (MQ=255)
                                                                                                                           ggTGACCGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTa                      <  1:660403/151‑1 (MQ=255)
                                                                                                                                ccGGCAGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTGCCGGATATTTAAAgc                  <  1:836867/150‑2 (MQ=255)
                                                                                                                                     aGCGCGTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGa            <  1:157383/151‑1 (MQ=255)
                                                                                                                                        gcgTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGatat         >  1:797349/1‑151 (MQ=255)
                                                                                                                                         cgTTTTCACGCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCTCCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATc        <  1:84169/151‑1 (MQ=255)
                                                                                                                                               cacgCGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCcgcg  >  2:897130/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                   
GGAAAGACGAATTCCATTTTCTTTGGTTTCGTTTTTCGGCACTTCAAAGAATCCGCTGGTCGCTTCCCCACCATTACGGCGTGAGAAGGTCTGAACGAAATCGCTCGGTTCCACGTTTGAGTAGGTGACCGGCAGCGCGTTTTCACACGCCTGGCCGGAACTGCATCCCGGTTGAATCGTCAGCTCTTTTGAGACCGGATCGTAAGTGACTTTATCGCCCGGTAAACCCACCGCGCGCTTGATGTAATCAAGCTTTGGATCTTCCGGATATTTAAAGACCACGATATCGCCGCG  >  NC_000913/2704635‑2704928

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A