Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F50 I2 R1 139 64.5 2139856 92.7% 1983646 149.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA NC_000913 4,228,771 A→G E347E (GAA→GAG)  yjbB → putative Na+/Pi‑cotransporter

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*NC_0009134,228,7710AG98.3% 211.4 / NA 59E347E (GAA→GAG) yjbBputative Na+/Pi‑cotransporter
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (25/33);  minor base C (0/1);  total (25/34)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

CACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGG  >  NC_000913/4228623‑4228916
                                                                                                                                                     |                                                                                                                                                 
cACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCa                                                                                                                                                 <  1:482433/151‑1 (MQ=255)
cACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCa                                                                                                                                                 <  2:284413/151‑1 (MQ=255)
    gTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAgatg                                                                                                                                             >  2:1066412/1‑151 (MQ=255)
      tttGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAgatga                                                                                                                                            <  1:785610/150‑1 (MQ=255)
      tttGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAgatga                                                                                                                                            <  1:204041/150‑1 (MQ=255)
       ttGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAgatgat                                                                                                                                           <  2:177957/150‑1 (MQ=255)
          cAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGaa                                                                                                                                       <  1:689409/151‑1 (MQ=255)
           aaaaCGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATgg                                                                                                                                         >  2:352279/1‑148 (MQ=255)
           aaaaCGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCGGGATGTCAGCGCGCTGGAAACGCACGCGCTTGCTCTGGCGAACGCCGCTCGC‑GAAACCCTGCGCATTGGCGACGCCGTGGAGCAGATGATgg                                                                                                                                         >  2:788774/1‑148 (MQ=255)
            aaaCGAATATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATAAGCACACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAgg                                                                                                                                     >  2:249225/1‑151 (MQ=255)
             aaCGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAggg                                                                                                                                    >  2:351034/1‑151 (MQ=255)
              aCGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGt                                                                                                                                   <  1:1066420/151‑1 (MQ=255)
                gATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTg                                                                                                                                 <  1:853425/151‑1 (MQ=255)
                      tCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATa                                                                                                                             >  2:683787/1‑149 (MQ=255)
                        gcgATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGt                                                                                                                         <  1:197215/151‑1 (MQ=255)
                          gATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGa                                                                                                                       <  1:711717/151‑1 (MQ=255)
                                 cGGAACTGGATACCCCGCTATGGCCTAAACGTCTGGATGTCGGCGCGCTGGATACGCGCACGCGTGCTCTGGCGAGCGCCGCGCGC‑GAAACCCGGCGCATTGGCGACGCCGTGGAGGAGCTGATTGAAGGGTTGAATAAAGTGATGCACg                                                                                                                 <  2:916463/150‑1 (MQ=255)
                                 cGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACgg                                                                                                                <  1:39579/151‑1 (MQ=255)
                                  ggAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGt                                                                                                               >  1:1001427/1‑151 (MQ=255)
                                  ggAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGt                                                                                                               >  2:737350/1‑151 (MQ=255)
                                    aaCTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTg                                                                                                              >  2:1069323/1‑150 (MQ=255)
                                    aaCTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGa                                                                                                             <  1:848975/151‑1 (MQ=255)
                                             cccAGCTTCGGCCTAAACATCTGGATGTCAGCGCGCTGGATGCGCCCACGCGTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACgg                                                                                                      <  2:351990/149‑1 (MQ=255)
                                             cccAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCa                                                                                                    <  2:65890/151‑1 (MQ=255)
                                                aGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAgg                                                                                                  >  2:381887/1‑150 (MQ=255)
                                                   tACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGgaga                                                                                               >  1:185226/1‑150 (MQ=255)
                                                    aCGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGgaga                                                                                               <  1:767339/149‑1 (MQ=255)
                                                     cGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAag                                                                                            <  1:342090/151‑1 (MQ=255)
                                                        ccTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGc                                                                                         >  2:603151/1‑151 (MQ=255)
                                                          tAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTg                                                                                       >  1:468476/1‑151 (MQ=255)
                                                              cATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGt                                                                                    >  2:990554/1‑150 (MQ=255)
                                                                tCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTa                                                                                   >  2:534686/1‑149 (MQ=255)
                                                                         cAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGc                                                                            >  2:966128/1‑147 (MQ=255)
                                                                          aGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAgatg                                                                       >  2:395321/1‑151 (MQ=255)
                                                                              cgcTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGatat                                                                   <  2:856462/151‑1 (MQ=255)
                                                                               gcTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATc                                                                  >  1:724430/1‑151 (MQ=255)
                                                                                 tGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATc                                                                  >  2:428529/1‑149 (MQ=255)
                                                                                   gATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACg                                                              <  2:397777/151‑1 (MQ=255)
                                                                                      aCGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGtt                                                            <  2:992676/150‑1 (MQ=255)
                                                                                       cGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTtct                                                          <  2:1046689/151‑1 (MQ=255)
                                                                                         cccACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTctct                                                        <  1:307228/151‑1 (MQ=255)
                                                                                                ttGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGc                                                 >  2:340152/1‑151 (MQ=255)
                                                                                                     ctGGCGAACGCCGCGGGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGACATCACCGTTCTCTACACCGCCAt                                              <  2:341000/149‑1 (MQ=255)
                                                                                                        gCGACCGCCGC‑CGCGGAAGCCCGGCGCATTGGCGCCGCCATGGACGGGATGAGGGAGGGTTTAAAAAAAGTGAGGCGTGGTGCGCCGCGGCAGAAAAAAGGGCGGCGTAAGCTGGCAGATGATATAAACGTTCTCTACACCGCCAtt                                             <  2:546588/147‑1 (MQ=255)
                                                                                                              gccgcGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTAt                                    <  2:378388/150‑1 (MQ=255)
                                                                                                                 gcgcgc‑gAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTgg                                >  2:215395/1‑151 (MQ=255)
                                                                                                                      gggAACCCCTGCGCTTTGGCCACGCCGTGGAGCAGATGATGGAAGGGTGGAATAAATTGAGCCACGGTGCGCCACGGCAGGAAAAAGAGCTGCGAGATCGGGCAGATGATATAAGCGTTCTCTCCGCCGCCATTAAGCTGTATCTGgcgc                             <  2:500180/148‑1 (MQ=255)
                                                                                                                      c‑gAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCgg                           >  1:1051666/1‑151 (MQ=255)
                                                                                                                        gAAACCCTGCGCATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCgg                           >  1:739685/1‑150 (MQ=255)
                                                                                                                          aaCCCTGCGCCTTGGCGGCGCCATGGGGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGAGGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGa                          <  2:91919/149‑1 (MQ=255)
                                                                                                                                gcgcATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGTAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCaaaa                  <  1:272128/151‑1 (MQ=255)
                                                                                                                                gcgcATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACGCCGCCATTAAGCTGTATCTGGCGCGGATGCCaaa                   <  1:367325/150‑1 (MQ=255)
                                                                                                                                gcgcATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCaaa                   <  1:125088/150‑1 (MQ=255)
                                                                                                                                  gcATTGGCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCaaa                   >  1:434142/1‑148 (MQ=255)
                                                                                                                                     tgggCGACGCAATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCAACGGCAGGAGAAAGGGCTGGGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAaagaag              <  2:78499/148‑1 (MQ=255)
                                                                                                                                       ggCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGTTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAagag            <  1:764366/150‑1 (MQ=255)
                                                                                                                                       ggCGACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAagag            <  2:413120/150‑1 (MQ=255)
                                                                                                                                          gACGCCATGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTgg        <  1:351978/151‑1 (MQ=255)
                                                                                                                                                aTGGAGCAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCggagg  >  1:915915/1‑151 (MQ=255)
                                                                                                                                                     |                                                                                                                                                 
CACGGTTTTGCAAAACGATTATTCGCGATGAACCGGAACTGGATACCCAGCTACGGCCTAAACATCTGGATGTCAGCGCGCTGGATACGCCCACGCTTGCTCTGGCGAACGCCGCGCGC‑GAAACCCTGCGCATTGGCGACGCCATGGAACAGATGATGGAAGGGTTGAATAAAGTGATGCACGGTGAGCCACGGCAGGAGAAAGAGCTGCGTAAGCTGGCAGATGATATCAACGTTCTCTACACCGCCATTAAGCTGTATCTGGCGCGGATGCCAAAAGAAGAGCTGGCGGAGG  >  NC_000913/4228623‑4228916

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A