Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 589,834 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583589,8340GC99.4% 793.9 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (181/158);  total (181/160)
Fisher's exact test for biased strand distribution p-value = 2.19e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.94e-01
*CP042583589,8350CG99.1% 803.6 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/3);  new base G (181/157);  total (181/160)
Fisher's exact test for biased strand distribution p-value = 1.02e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583589,8360TA99.7% 819.8 / NA 341intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (181/159);  minor base G (0/1);  total (181/160)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 341 total aligned reads displayed.

GGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGAACTAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGGCTAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTACTATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGATGGA  >  CP042583/589556‑590115
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                         
   acaTTGGGGAACTACCGAATAATGACGAAGGGAGCCATTGAAAGAAGTTACGGAATGATAGTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg                                                                                                                                                                                                                                                                               <  2:1146666/289‑1 (MQ=255)
   acaTTAGCGACCTTCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg                                                                                                                                                                                                                                                                               <  1:1149610/289‑1 (MQ=255)
               ttCTGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCa                                                                                                                                                                                                                                                                   >  1:1784235/1‑289 (MQ=255)
                  tGAATAATGACTAATGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAgcg                                                                                                                                                                                                                                                                <  2:587848/289‑1 (MQ=255)
                        atGGCTACTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATaa                                                                                                                                                                                                                                                          <  1:860872/289‑1 (MQ=255)
                              aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATg                                                                                                                                                                                                                                                        >  1:2007436/1‑285 (MQ=255)
                              aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATg                                                                                                                                                                                                                                                        <  2:2007436/285‑1 (MQ=255)
                              aaTGCCGCCATTGACAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACtt                                                                                                                                                                                                                                                    >  2:2075923/1‑289 (MQ=255)
                                   cgccattgacAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTAccc                                                                                                                                                                                                                                               >  2:2190824/10‑289 (MQ=255)
                                                           gATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg                                                                                                                                                                                                                      <  1:308706/289‑1 (MQ=255)
                                                           gATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg                                                                                                                                                                                                                      >  2:839820/1‑289 (MQ=255)
                                                             tatTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑Cgcag                                                                                                                                                                                                                                                                                   >  1:1376608/1‑227 (MQ=255)
                                                             tatTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGaa                                                                                                                                                                                                                    >  1:1736110/1‑289 (MQ=255)
                                                                  gTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGcagcag                                                                                                                                                                                                                                                                                <  1:1524338/225‑1 (MQ=255)
                                                                       cacGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCa                                                                                                                                                                                                          >  1:681461/1‑289 (MQ=255)
                                                                          ggCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAAt                                                                                                                                                                                                       >  1:923232/1‑289 (MQ=255)
                                                                            ccAGGTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATgg                                                                                                                                                                                                     >  1:88162/1‑289 (MQ=255)
                                                                               ggTTAACCAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTg                                                                                                                                                                                                   >  1:1570228/1‑288 (MQ=255)
                                                                                     ccAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAgg                                                                                                                                                                                                                                                                               >  2:1117178/1‑207 (MQ=255)
                                                                                     ccAGCACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttga                                                                                                                                                                                            >  1:445363/1‑286 (MQ=255)
                                                                                         cACGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttgaattt                                                                                                                                                                                        >  2:1155498/1‑282 (MQ=255)
                                                                                          aCGTTGAACTGACTGTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGttgaattt                                                                                                                                                                                        >  1:1072565/1‑281 (MQ=255)
                                                                                                     actgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCata                                                                                                                                                                            >  1:1312377/1‑289 (MQ=255)
                                                                                                       tgTTTAGCGACGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATAtt                                                                                                                                                                          <  1:957762/289‑1 (MQ=255)
                                                                                                            agcgacGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca                                                                                                                                                                     <  1:495018/284‑1 (MQ=255)
                                                                                                               gacGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGcgcg                                                                                                                                                                                                                      <  1:1807266/235‑1 (MQ=255)
                                                                                                               gacGGGCTAATGGTCATCAGTGCCAATCAACACTGAATAATCAAAATGGTCAACATTCCCTGCACCGGTGCATCAACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTGCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCAAGCCAAGTAGCGAAC‑CGGAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGGGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGcaca                                                                                                                                                                   <  2:1518455/286‑1 (MQ=255)
                                                                                                                   ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACAt                                                                                                                                                                                                                                                                           <  2:1811522/181‑1 (MQ=255)
                                                                                                                   ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAg                                                                                                                                                                                                                                                                  >  1:703370/1‑190 (MQ=255)
                                                                                                                   ggCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCaaa                                                                                                                                                                                                        >  2:627423/1‑247 (MQ=255)
                                                                                                                         tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAAt                                                                                                                                                        <  2:1302522/289‑1 (MQ=255)
                                                                                                                         tGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAAt                                                                                                                                                        <  2:1061305/289‑1 (MQ=255)
                                                                                                                             catcaGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAC‑CATCTGCTCGAAGGCCAGACCAAATGTTGCCGTGTAATTTGCCCGCTCCATTTTTGGCCCAATCCCGGCAATcct                                                                                                                                                     >  2:1871991/1‑286 (MQ=255)
                                                                                                                                caGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTcc                                                                                                                                                                               >  1:573786/1‑259 (MQ=255)
                                                                                                                                    gtataacatacaagAATAATCACAATGGTCAACATTCCCTGCACCGGGGCATCCACTTTGGTTACGCGGGATAAAATTTGAGGTAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCTCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATAGTTGGCACAATCCCGGCAATCACGTtggtg                                                                                                                                              <  2:1380525/275‑1 (MQ=255)
                                                                                                                                      cagtccaacctGAATAAGGACAATGGTCACACTTCCCTGCACCGGTGAATCAGATTTGGTTACCCGGGAGAAAATTTTGTGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTCGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGga                                                                                                                                            <  2:173378/279‑1 (MQ=255)
                                                                                                                                       aaTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga                                                                                                                                          <  1:1976671/289‑1 (MQ=255)
                                                                                                                                        aTCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGAc                                                                                                                                         >  1:1465670/1‑289 (MQ=255)
                                                                                                                                             ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat                                                                                                                                    >  1:738418/1‑289 (MQ=255)
                                                                                                                                             ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat                                                                                                                                    >  1:811879/1‑289 (MQ=255)
                                                                                                                                             ctctGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatat                                                                                                                                    >  2:949604/1‑289 (MQ=255)
                                                                                                                                                  aataatCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCTAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATc                                                                                                                               >  1:515121/1‑289 (MQ=255)
                                                                                                                                                     aatCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCCCCCTATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGatatttgataag                                                                                                                            >  1:1279483/1‑281 (MQ=255)
                                                                                                                                                       tCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGc                                                                                                                                                                                                                 >  2:2153421/1‑202 (MQ=255)
                                                                                                                                                        cacaATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc                                                                                                                         <  1:376567/289‑1 (MQ=255)
                                                                                                                                                        acaaaTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc                                                                                                                         <  2:1580406/286‑1 (MQ=255)
                                                                                                                                                          caATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca                                                                                                                                                                     <  1:1828834/243‑1 (MQ=255)
                                                                                                                                                            aTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCCGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGTTGGAGACGATATAAATCACCGCCCCa                                                                                                                      >  2:1441059/1‑288 (MQ=255)
                                                                                                                                                            aTGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCa                                                                                                                      >  1:1932894/1‑288 (MQ=255)
                                                                                                                                                             tGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCAcc                                                                                                                    <  2:692724/289‑1 (MQ=255)
                                                                                                                                                                    cATTCCCGGAACCGGTGCATCCACTTTGGTTACACGGGAAAAAATTTTAGGGAAGTAGCCTTAATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa                                                                                                             <  2:936753/289‑1 (MQ=255)
                                                                                                                                                                         ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgcc                                                                                                        <  1:632593/289‑1 (MQ=255)
                                                                                                                                                                         ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgc                                                                                                         >  2:509093/1‑288 (MQ=255)
                                                                                                                                                                         ccTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTGGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTAccgc                                                                                                         >  2:781464/1‑288 (MQ=255)
                                                                                                                                                                          cTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa                                                                                                             <  1:2247901/283‑1 (MQ=255)
                                                                                                                                                                          cTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa                                                                                                             >  2:2247901/1‑283 (MQ=255)
                                                                                                                                                                                cGGTGCATCCACGTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTAcc                                                                                                 <  2:1273879/289‑1 (MQ=255)
                                                                                                                                                                                  gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAAt                                                                                                                                >  1:995336/1‑256 (MQ=255)
                                                                                                                                                                                  gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTa                                                                                                             <  2:886347/275‑1 (MQ=255)
                                                                                                                                                                                  gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcgc                                                                                               >  2:968022/1‑289 (MQ=255)
                                                                                                                                                                                  gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcgc                                                                                               >  1:2143693/1‑289 (MQ=255)
                                                                                                                                                                                  gTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACcg                                                                                                >  2:1599802/1‑288 (MQ=255)
                                                                                                                                                                                   tGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga                                                                                                                                          <  2:34342/245‑1 (MQ=255)
                                                                                                                                                                                   tGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga                                                                                                                                          >  1:34342/1‑245 (MQ=255)
                                                                                                                                                                                       tCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTg                                                                                          >  1:274198/1‑289 (MQ=255)
                                                                                                                                                                                            tttGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCAccgcc                                                                                                                         <  2:1129565/253‑1 (MQ=255)
                                                                                                                                                                                            tttGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGcaca                                                                                     >  1:1613311/1‑289 (MQ=255)
                                                                                                                                                                                                   acacGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGCCCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGAAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTACCGTCCCGCCGAGTACCGCGATTGCCACATTACGt                                                                               >  2:1697608/1‑288 (MQ=255)
                                                                                                                                                                                                    cacGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCa                                                                                                                              >  2:651642/1‑240 (MQ=255)
                                                                                                                                                                                                      cGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCg                                                                           >  2:245287/1‑289 (MQ=255)
                                                                                                                                                                                                         gagaAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCggg                                                                         <  1:144051/288‑1 (MQ=255)
                                                                                                                                                                                                          agaAAATTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGtt                                                                       >  1:93939/1‑289 (MQ=255)
                                                                                                                                                                                                             aaaTTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTc                                                                    <  1:978062/289‑1 (MQ=255)
                                                                                                                                                                                                               aTTTTAGGGAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCa                                                                  <  2:72643/289‑1 (MQ=255)
                                                                                                                                                                                                                       gaagaaGCCCTCAACAGATGGAGATTTAAACACCTGAACAATGGTGAACTGCCAGACAATTA‑GCGACTCTCAGCCAGACATCACCATCAGGTCCTTAATGACTTTACCCCCTTCC‑GCCTGAATAAACTGCGCAAAGGCCGATCCAAATGGTGCCGTTGAATTTGCCAGCTCCGTATATGCCAAAATCCCGGCAATCACTTTGCTGGAGACGATATAAAGCACCGCCGCACCTTACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTGTTCCACTACAt                                                            <  2:405419/287‑1 (MQ=255)
                                                                                                                                                                                                                       gAAGTAGCCTTCATCAGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACAt                                                            <  2:1239507/287‑1 (MQ=255)
                                                                                                                                                                                                                                 tcatcaGATGAAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACg                                                                                                                                                    <  1:2102304/189‑1 (MQ=255)
                                                                                                                                                                                                                                  cataagatgaaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGACGGACAGACAAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCAGGCAATCACGGTGGTGGAGGCGATATAAATCACAGCCGCACGTAACGTACCGCCGAGTACCGCGATTGGAACATTACGTTCCGGGTGTTCCACTACAACAGTATTGGcac                                                >  1:1664713/11‑288 (MQ=255)
                                                                                                                                                                                                                                     cagattaagctttAAAGCCCTGGGCAATGGTGAACGGCCAGCCAAGTAGCGAAC‑CGCAGCAGGGCATCACCATCAGCGCCATAATGACGTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGc                                            <  2:1459569/279‑1 (MQ=255)
                                                                                                                                                                                                                                     cacaaaaaGATTAAAACATCTGGGACATGTGGAAGTGCAAGCCAGGTAGCGAAC‑CGCAGCAGGACACCCCCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGGGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGc                                            <  2:924915/282‑1 (MQ=255)
                                                                                                                                                                                                                                      agatgaaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa                                           <  2:451900/283‑1 (MQ=255)
                                                                                                                                                                                                                                           aaGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGCGTACCGCGATTGGCACCTTACGTTCCGGGTTTTCCACTACATCCGTATTCGCACACGCaacct                                       >  2:666662/2‑284 (MQ=255)
                                                                                                                                                                                                                                            aGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTc                                      <  1:242466/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaaCACCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCa                               >  1:1249123/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cacCTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGa                            <  1:2065992/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        cTGGGCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACAt                                                            <  2:156520/254‑1 (MQ=255)
                                                                                                                                                                                                                                                          gggCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAg                        >  1:1162307/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          gggCAATGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGCTTTCCACTACATCAGTATTCGCACACGCAGACTCCAAAc                                 >  1:659546/1‑279 (MQ=255)
                                                                                                                                                                                                                                                              aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca                    <  2:300848/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca                    <  1:1716913/288‑1 (MQ=255)
                                                                                                                                                                                                                                                              aaTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAAGCCCGGCAATCACGTTGGGGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca                    <  1:610711/288‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTGGTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCcaca                  <  1:469829/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGgaga                                                                                                                                          >  2:1250978/1‑166 (MQ=255)
                                                                                                                                                                                                                                                                  gTGAACTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa                                           >  1:1125497/1‑261 (MQ=255)
                                                                                                                                                                                                                                                                     aaCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCca                    <  2:814632/281‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGca                                                                                                                                                                     <  2:485811/135‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aCTGCCAGCCAAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCa                                           >  1:78319/1‑257 (MQ=255)
                                                                                                                                                                                                                                                                          ccagccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGCTCCGGGTTTTCCACTACATCAGTATTCGCACCCCCAGCCCCCAGACCAAGAAAACCCCACAGCGTCATAGCg       >  2:1894185/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            agccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCa                                                                  <  2:1359702/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                            agccaAGTAGCGAAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTTGAATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGAt     >  1:1055440/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                      |||                                                                                                                                                                                                                                                                                         
GGCACATTAGCGACCTTCTGAATAATGACTAATGCCGCCATACTCAGAATATACGGAATGATATTGGTCACCACGGCCAGGTTAACCAGCACGTTGAACTGACTGTTTAGGCTCGGGCTAATGGTCATCAGTGCCAATCCACTCTGAATAATCACAATGGTCAACATTCCCTGCACCGGTGCATCCACTTTGGTTACACGGGAGAAAATTTTAGGGAAGTAGCCTTCATCAGAACTAGATTTAAACACCTGGGCAATGGTGAACTGCCAGCCAAGTAGGCTAC‑CGCAGCAGGACATCACCATCAGCGCCATAATGACTTTACCCACTTCCGGCGTGAA‑CATCTGCGCGAAGGCCAGACCAAATGGTGCCGTACTATTTGCCAGCTCCATATTTGGCACAATCCCGGCAATCACGTTGGTGGAGACGATATAAATCACCGCCGCACCTAACGTACCGCCGAGTACCGCGATTGGCACATTACGTTCCGGGTTTTCCACTACATCAGTATTCGCACACGCAGACTCCAGACCAAGAAAAGCCCACAGCGTCATAGCGATGGA  >  CP042583/589556‑590115

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A