Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,490,176 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,490,1760AT99.4% 792.3 / NA 331intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (166/163);  minor base G (2/0);  total (168/163)
Fisher's exact test for biased strand distribution p-value = 4.99e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,490,1770GC98.5% 781.2 / NA 331intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (168/158);  minor base A (0/5);  total (168/163)
Fisher's exact test for biased strand distribution p-value = 2.81e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,490,1780TA99.7% 799.1 / NA 331intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (168/162);  minor base G (0/1);  total (168/163)
Fisher's exact test for biased strand distribution p-value = 4.92e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 331 total aligned reads displayed.

CTGCTTCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGAGCCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGAGTACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCAGTCATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATG  >  CP042583/1489897‑1490455
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
cTGCTTCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGtttt                                                                                                                                                                                                                                                                                 >  1:1202550/1‑289 (MQ=255)
    ttCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTg                                                                                                                                                                                                                                                                              <  1:1811971/288‑1 (MQ=255)
                      aaGCCGGACAACTGGGGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGTGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctg                                                                                                                                                                                                                                                           <  2:843357/289‑1 (MQ=255)
                       aGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctgg                                                                                                                                                                                                                                                          <  1:2039110/289‑1 (MQ=255)
                       aGCCGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctg                                                                                                                                                                                                                                                           <  2:2186249/288‑1 (MQ=255)
                          cGACCAACTGGAGTTACTGTCGCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctggc                                                                                                                                                                                                                                                         <  1:548684/287‑1 (MQ=255)
                                              cgcGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaa                                                                                                                                                                                                                                   >  1:684255/3‑289 (MQ=255)
                                               gcGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGaaaaa                                                                                                                                                                                                                                  >  1:253322/2‑289 (MQ=255)
                                                             tCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGTTGCAGAAAAAGGGATCGCTTTCg                                                                                                                                                                                                                     >  1:1991735/1‑288 (MQ=255)
                                                             tCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCg                                                                                                                                                                                                                     >  1:1582883/1‑288 (MQ=255)
                                                             tCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGATTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGGCAACGTTTTTTTCTGAACAACGGATTGGCTGGCAGGTGGAACTCGCTGCAGAAATAGGGATGGCTTTCg                                                                                                                                                                                                                     >  2:654899/1‑288 (MQ=255)
                                                                   tGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctg                                                                                                                                                                                                                                                           >  2:400441/1‑244 (MQ=255)
                                                                   tGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctg                                                                                                                                                                                                                                                           <  1:400441/244‑1 (MQ=255)
                                                                    gCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGAAGTTGGAACTGGCTGCAGAAAAGGGGACCTCTTTCGGCAATATc                                                                                                                                                                                                             >  2:1449845/1‑289 (MQ=255)
                                                                     ccTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCATTGGGACATGGCTGCAGAAAAAGGGATCGCTTTCGGCAatacc                                                                                                                                                                                                             >  2:184601/1‑286 (MQ=255)
                                                                     ccTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCg                                                                                                                                                                                                            >  2:182796/1‑289 (MQ=255)
                                                                            tttGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGAGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACGCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGAAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCa                                                                                                                                                                                                      <  1:948680/288‑1 (MQ=255)
                                                                              tGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCAtcg                                                                                                                                                                                                   >  1:1658959/1‑289 (MQ=255)
                                                                              tGGGCAGTTGGCGCTGACCGTGACTACAGATTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCTAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTTCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGTCTGCAGAAAAAGGGATAGCTTTCGGCAATATCGACGCCGtcg                                                                                                                                                                                                   >  1:1954611/1‑289 (MQ=255)
                                                                                   aGTTGTCGCTGACCGTGACTACAGTTTTCTTGTTATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGTGCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGa                                                                                                                                                                                               <  2:1582883/288‑1 (MQ=255)
                                                                                             tgccggtatcaCAGTGTGCTGGTAATGGATTATCTACCCCCTCGTCCGCTGGATGCGCATAGCGCATTTAATCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCGCAGCCCAACACCTGGCAACGTCGCTGGTAAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGATGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTcagc                                                                                                                                                                                    <  2:1195497/279‑1 (MQ=255)
                                                                                              aCCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACCTCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAACAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTcagca                                                                                                                                                                                   >  1:1222379/1‑289 (MQ=255)
                                                                                                   gACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCg                                                                                                                                                                                >  1:1083449/1‑287 (MQ=255)
                                                                                                        cAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATtggctg                                                                                                                                                                                                                                                           <  1:1048565/207‑1 (MQ=255)
                                                                                                          gTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCGGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGcct                                                                                                                                                                        >  2:1794840/1‑287 (MQ=255)
                                                                                                          gTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGcctc                                                                                                                                                                       >  1:1008383/1‑287 (MQ=255)
                                                                                                              tCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGcctcaca                                                                                                                                                                    >  1:644945/1‑283 (MQ=255)
                                                                                                                    tttGGATTATTTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTAAATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCg                                                                                                                                                             <  2:13895/287‑1 (MQ=255)
                                                                                                                     aTGGATTATCTCCCACCTCGTCCGCTGGATGGGCATAGCGCATTGATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCg                                                                                                                                                             <  2:2035687/288‑1 (MQ=255)
                                                                                                                     aTGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGc                                                                                                                                                            >  1:1515230/1‑289 (MQ=255)
                                                                                                                      tGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCa                                                                                                                                                           <  1:1900842/289‑1 (MQ=255)
                                                                                                                      tGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCa                                                                                                                                                           <  2:1083449/289‑1 (MQ=255)
                                                                                                                      tGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCa                                                                                                                                                           <  2:268653/289‑1 (MQ=255)
                                                                                                                      tGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCa                                                                                                                                                           <  2:130313/289‑1 (MQ=255)
                                                                                                                           tATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCtt                                                                                                                                                      <  2:1245722/289‑1 (MQ=255)
                                                                                                                            aTCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCt                                                                                                                                                       >  1:1786353/1‑287 (MQ=255)
                                                                                                                             tctcCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTtct                                                                                                                                                    <  2:1737717/289‑1 (MQ=255)
                                                                                                                                       cGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCt                                                                                                                                                                                                                         <  2:1986135/210‑1 (MQ=255)
                                                                                                                                         tCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCAtcgt                                                                                                                                                                                                  >  2:1756061/1‑231 (MQ=255)
                                                                                                                                          ccGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCg                                                                                                                                       >  1:1153518/1‑289 (MQ=255)
                                                                                                                                                       aTAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                          <  1:1348818/289‑1 (MQ=255)
                                                                                                                                                       aTAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                          <  1:56664/289‑1 (MQ=255)
                                                                                                                                                       aTAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCgg                                                                                                                          <  1:839544/289‑1 (MQ=255)
                                                                                                                                                          gcgcATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGc                                                                                                                                                                                             >  2:1417929/1‑219 (MQ=255)
                                                                                                                                                              aTTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACtg                                                                                                                    <  1:939456/288‑1 (MQ=255)
                                                                                                                                                                ttATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACgg                                                                                                                                         <  2:885026/265‑1 (MQ=255)
                                                                                                                                                                ttATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACgg                                                                                                                                         >  1:885026/1‑265 (MQ=255)
                                                                                                                                                                 tATTCTTAGTCTGCAAATTGGCCGTTTACCTCAATGGATCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCa                                                                                                                <  2:812845/289‑1 (MQ=255)
                                                                                                                                                                   ttCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCACCCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACt                                                                                                              <  2:1053712/289‑1 (MQ=255)
                                                                                                                                                                   ttCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACt                                                                                                              <  1:1435171/289‑1 (MQ=255)
                                                                                                                                                                     cTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTcc                                                                                                                            <  2:1220069/273‑1 (MQ=255)
                                                                                                                                                                        ggTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGc                                                                                                                                                                                             <  1:1750051/205‑1 (MQ=255)
                                                                                                                                                                              cAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGAt                                                                                                    <  2:592991/288‑1 (MQ=255)
                                                                                                                                                                               aaaTTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGa                                                                                                     <  1:1866571/286‑1 (MQ=255)
                                                                                                                                                                                aaTTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATGACGCGCTCTCCACAACACCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGc                                                                                                 <  1:28334/289‑1 (MQ=255)
                                                                                                                                                                                aaTTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGc                                                                                                 <  2:1349597/289‑1 (MQ=255)
                                                                                                                                                                                                cAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGAcc                                                                                 <  2:564390/289‑1 (MQ=255)
                                                                                                                                                                                                cAATGGACGGACCAACCCCAATTTGGCCTTGATTTCGATAACGCGCTCTCCCCAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCTTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGAcc                                                                                 <  2:1008383/289‑1 (MQ=255)
                                                                                                                                                                                                  aTGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGTTTTATGGTCCGGCAACTGTTCCCTGTGTCCGGACGGCCCGTACATTTTCGACCCg                                                                               >  2:580633/1‑289 (MQ=255)
                                                                                                                                                                                                  aTGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCg                                                                               >  2:765136/1‑289 (MQ=255)
                                                                                                                                                                                                      aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCgg                                                                              >  1:1241086/1‑286 (MQ=255)
                                                                                                                                                                                                      aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                            <  1:765136/288‑1 (MQ=255)
                                                                                                                                                                                                      aGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGAAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                            <  1:2066834/288‑1 (MQ=255)
                                                                                                                                                                                                        cGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCt                                                                           >  1:375706/1‑287 (MQ=255)
                                                                                                                                                                                                        cGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATAATCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACGGTGCACTCGGTCCGGATGGCCCGTACATTTTCCACCAGGCCTg                                                                          >  2:521242/1‑288 (MQ=255)
                                                                                                                                                                                                          accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGc                                                                                                                                                                                             <  1:425977/171‑1 (MQ=255)
                                                                                                                                                                                                          accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                            <  1:1413467/284‑1 (MQ=255)
                                                                                                                                                                                                          accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCt                                                                        >  1:171546/1‑288 (MQ=255)
                                                                                                                                                                                                          accaaccaCAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCt                                                                        >  2:871523/1‑288 (MQ=255)
                                                                                                                                                                                                                     tttGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                            <  1:2133413/273‑1 (MQ=255)
                                                                                                                                                                                                                         gCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGc                                                                                                                                                         >  1:462422/1‑192 (MQ=255)
                                                                                                                                                                                                                          ccTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGagag                                                      >  1:573808/1‑289 (MQ=255)
                                                                                                                                                                                                                             tGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTTCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTACGTGGGGT‑CCCGagagggt                                                   >  2:415456/1‑286 (MQ=255)
                                                                                                                                                                                                                             tGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGc                                                   >  1:2208753/1‑289 (MQ=255)
                                                                                                                                                                                                                             tGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGc                                                   >  1:1845099/1‑289 (MQ=255)
                                                                                                                                                                                                                              gATTTCCATCACGCGCTCTCCACAACGCCCCAGCCCAACGCCTGGCAACGTCGCTGGTAAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCg                                                  <  2:1892743/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cgcgCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATg                                       >  1:852984/1‑289 (MQ=255)
                                                                                                                                                                                                                                          gcgcTCTCCACACCTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGt                                      <  1:2192076/289‑1 (MQ=255)
                                                                                                                                                                                                                                            gcTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                    <  1:1807848/289‑1 (MQ=255)
                                                                                                                                                                                                                                              tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTAcc                                  >  1:1531410/1‑289 (MQ=255)
                                                                                                                                                                                                                                              tctcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTAc                                   >  2:319205/1‑288 (MQ=255)
                                                                                                                                                                                                                                                tcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGcc                                                                            >  2:1662700/1‑246 (MQ=255)
                                                                                                                                                                                                                                                tcCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCg                                 >  2:683983/1‑288 (MQ=255)
                                                                                                                                                                                                                                                tcCACAACTCCACAGCCCAACACCTGCCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGATGGCAGTTGGACCTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGTCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑Tggg                                                                 <  1:1324865/256‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccccaACTCCACTGCCCACCACCTGGCAAGGTCGCTGGTCAACGTTTTTGGCTGAACAAGGGTGTGGCTGGCAGTTGGAACTAGCTGCGGAAACAGGGATCGCTTGCGGCAATGTCGCGGCCAGCGTCGGGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTATCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGTCCTGGCGATGTTACCGCt                               <  2:240771/286‑1 (MQ=255)
                                                                                                                                                                                                                                                 ccACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCt                               <  2:1531410/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  cacaACTCCACAGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGAc                                                <  1:696974/271‑1 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAc                                                                      >  1:1625918/1‑242 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAc                                                                      <  2:1625918/242‑1 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTa                                    <  1:1299565/275‑1 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGa                      >  2:2222377/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          cacaGCCCAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGa                      >  1:1477153/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cccAACACCTGGCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGc                                                                                                                                                                                                        >  2:2086871/1‑107 (MQ=255)
                                                                                                                                                                                                                                                                     tgcTGGCAACGTCGCTGGTCGACGTTTTTTGTTGACAAACGGATGGCATGGCAGTGGGAACTGGCTGCGAAAAAATGGATCGCTTTGGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTGGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCcac           <  2:1491604/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑Tggg                                                                 >  2:79899/1‑231 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑Tggg                                                                 <  1:79899/231‑1 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGCCCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACaaa        >  2:1038232/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGc                                           >  2:693940/1‑253 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCa                            >  2:194864/1‑268 (MQ=255)
                                                                                                                                                                                                                                                                         ggCAACGTCGCTGGTCAACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCTCACATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATCTTCGACCCGGCCTGCTAC‑TGGGGCTACAGAGAGTGCGCACTGGCGATGTTACCGCTGCATACTGATCAGCCGCCACaaa        >  2:441441/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
CTGCTTCCCGGTTTTACCGCCGAAGCCGACCAACTGGAGTTACTGAGCCGTAGTAAAACCGTCACCGTGCCTAAGGTTTGGGCAGTTGGCGCTGACCGTGACTACAGTTTTCTGGTGATGGATTATCTCCCACCTCGTCCGCTGGATGCGCATAGCGCATTTATTCTTGGTCAGCAAATTGCGCGTTTACATCAATGGAGCGACCAACCACAATTTGGCCTTGATTTCGATAACGCGCTCTCCACAACTCCACAGCCCAACACCTGGCAACGTCGCTGGAGTACGTTTTTTGCTGAACAACGGATTGGCTGGCAGTTGGAACTGGCTGCAGAAAAAGGGATCGCTTTCGGCAATATCGACGCCATCGTCGAGCATATTCAGCAGCGTCTGGCCAGTCATCAACCGCAGCCTTCTCTGTTGCACGGCGATTTATGGTCCGGCAACTGTGCACTGGGTCCGGATGGCCCGTACATTTTCGACCCGGCCTGCTAC‑TGGGGTGACCGAGAGTGCGACCTGGCGATGTTACCGCTGCATACTGAACAGCCGCCACAAATCTATG  >  CP042583/1489897‑1490455

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A