Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,495,899 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,495,8990AT99.1% 533.9 / ‑5.9 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (119/105);  minor base C (1/1);  total (122/106)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,495,9000GC100.0% 542.7 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (122/106);  total (122/106)
*CP0425831,495,9010TA99.6% 540.4 / NA 228intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (122/105);  minor base G (0/1);  total (122/106)
Fisher's exact test for biased strand distribution p-value = 4.65e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 228 total aligned reads displayed.

GCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGAGCCAACATAACGAAAAGAACCCACAT‑CAGCACCAGAGTCCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACAGTCTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACAGTCTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTGACCATGAGCG  >  CP042583/1495620‑1496179
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
    cACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGa                                                                                                                                                                                                                                                                              >  1:101917/1‑289 (MQ=255)
              atatTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGCAACCGGGGATGGCCTCACTGG‑CACCTGAGGCCGGctt                                                                                                                                                                                                                                                                     >  2:72153/1‑287 (MQ=255)
               tatTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCAACAGTCACCACTACACGATTCCAGCGAAACGAAACCGGGGAAGGACTCACTTG‑CACCCGAGGACGGctcta                                                                                                                                                                                                                                                                   >  2:418396/1‑288 (MQ=255)
                            caaaaCTATTGTTTAGCCGATTTAGCCACTGTCCGTCCCGCTTTGCGTGTATTTCAGAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCGCTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGc                                                                                                                                                                                                                                                      <  2:1723279/288‑1 (MQ=255)
                            aaaaaCTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCg                                                                                                                                                                                                                                                        >  1:859958/1‑287 (MQ=255)
                            aaaaaCTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGc                                                                                                                                                                                                                                                      <  1:1677692/289‑1 (MQ=255)
                                     aGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCaa                                                                                                                                                                                                                                             <  2:545663/288‑1 (MQ=255)
                                     aGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAac                                                                                                                                                                                                                                            <  1:72153/289‑1 (MQ=255)
                                        ttAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAaca                                                                                                                                                                                                                                           <  1:27385/287‑1 (MQ=255)
                                          aGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCg                                                                                                                                                                                                                                        >  1:302649/1‑288 (MQ=255)
                                           gCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGc                                                                                                                                                                                                                                                                       <  2:1288244/257‑1 (MQ=255)
                                           gCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGc                                                                                                                                                                                                                                                                       >  1:1288244/1‑257 (MQ=255)
                                            ccGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCa                                                                                                                                                                                                                                     >  1:823879/1‑289 (MQ=255)
                                            ccGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCGCTCATCGTCCAGCGGC‑TGAACCACCACCGccc                                                                                                                                                                                                                                     >  2:1935641/1‑288 (MQ=255)
                                             cGAGTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAg                                                                                                                                                                                                                                    <  2:1143585/289‑1 (MQ=255)
                                                tttAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACGGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGt                                                                                                                                                                                                                                  <  1:698090/288‑1 (MQ=255)
                                                tttAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCAACAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTg                                                                                                                                                                                                                                 <  1:418396/289‑1 (MQ=255)
                                                   aGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGcac                                                                                                                                                                                                                              <  1:1716318/289‑1 (MQ=255)
                                                      cccTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGcaca                                                                                                                                                                                                                             <  1:358915/287‑1 (MQ=255)
                                                          ttACGTCCCGTTTGGGGTGTATTTCATGACACCGTTTCCAGAATTGTATCCGAAGCCTGTTCTGTCTGGTGGTCTATAGTTAGAGGGTTGTTTGATCAAAACTGCGGCCCTTTCAGTAAGTAACGAAGGACGCGTGTTCAATGTCGCAAGATAACGAAAAGATTCCACAT‑CAGCATCAGTCACCACTACATGATTCTTGCGAAGCGAAGTCGGGGATGGGCTCACTGG‑CACCTGGGGACGGCTCTCACCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                                                                                                        <  2:2040092/287‑1 (MQ=255)
                                                          gTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                                                                                                        >  1:1369012/1‑288 (MQ=255)
                                                          gTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCGCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGATTCCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTAc                                                                                                                                                                                                                       <  1:295345/289‑1 (MQ=255)
                                                                 ccGCTTTGCGTTTGTTTCATTAAACCGTTGCCAGAATAGTCACCGATGCGGGATCTGGCTGGTGGTCGATCGTTGGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCa                                                                                                                                                                                                                <  2:1209417/289‑1 (MQ=255)
                                                                  cGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGGGGC‑CGAACCAACACCCCCAGGGCCCCAACCTCACGCCCCAg                                                                                                                                                                                                               >  2:2113880/1‑289 (MQ=255)
                                                                   gCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAgg                                                                                                                                                                                                              <  2:1506725/289‑1 (MQ=255)
                                                                    cTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACCGG‑CACCTGAGGACGGCCCTCATCGCCCA‑CGGCGTGAACCAACACCGCCAGGGCCACCACCTACCCCACCAggg                                                                                                                                                                                                             >  2:1800710/1‑289 (MQ=255)
                                                                     tttGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGa                                                                                                                                                                                                            >  1:1498964/1‑289 (MQ=255)
                                                                            gtATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                                                                                                     <  1:646896/289‑1 (MQ=255)
                                                                            gtATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                                                                                                     <  1:1935641/289‑1 (MQ=255)
                                                                              atttgctAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCGGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAg                                                                                                                                                                                                   <  2:2151231/283‑1 (MQ=255)
                                                                                          cGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATAcgc                                                                                                                                                                                       >  1:1149049/1‑289 (MQ=255)
                                                                                            tttCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACgg                                                                                                                                                                                                                                                                        <  2:1132747/207‑1 (MQ=255)
                                                                                            tttCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGcac                                                                                                                                                                                                                              >  1:622441/1‑248 (MQ=255)
                                                                                            tttCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGt                                                                                                                                                                                     >  2:1827854/1‑289 (MQ=255)
                                                                                            tttCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGt                                                                                                                                                                                     >  1:1316227/1‑289 (MQ=255)
                                                                                                        tctcCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACAcc                                                                                                                                                                                                                                         >  1:1283524/1‑225 (MQ=255)
                                                                                                        tctcCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACtt                                                                                                                                                                         >  1:1526936/1‑289 (MQ=255)
                                                                                                          tcCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTaa                                                                                                                                                                       >  1:308756/1‑289 (MQ=255)
                                                                                                                   ggATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                                                                                                     >  2:1864059/1‑250 (MQ=255)
                                                                                                                   ggATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGaa                                                                                                                                                                                                     <  1:1864059/250‑1 (MQ=255)
                                                                                                                      tCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAg                                                                                                                                                            >  1:1695401/1‑288 (MQ=255)
                                                                                                                      tCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCGCATCGTCCAGCGGC‑GGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCAGGAAg                                                                                                                                                            >  1:1132953/1‑288 (MQ=255)
                                                                                                                                ggtCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCaaa                                                                                                                                                 <  1:1448034/289‑1 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTATTAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGAt                                                                                                                                                                                           <  2:74379/236‑1 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGaaaa                                                                                                                                      >  2:621957/1‑289 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGaaaa                                                                                                                                      >  2:509026/1‑289 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGaaaa                                                                                                                                      >  1:2202724/1‑289 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGaaaa                                                                                                                                      >  2:444506/1‑289 (MQ=255)
                                                                                                                                           agagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACCCACTGG‑CACCGGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGCGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTGAATTCTCTGTAAGACGTACGGAAAGGCAGAGaaaa                                                                                                                                      >  2:950880/1‑289 (MQ=255)
                                                                                                                                            gagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAg                                                                                                                                                                                                                                    <  2:1605997/194‑1 (MQ=255)
                                                                                                                                            gagagTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACACACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGA‑TGAACCAACACCGCCAGGTGCACAACCCACCGCCCCCGGGAGCATGAAAGACCCTGAAAAGCGTAACGAAAACATAAATTCACTGGAAAACATAGACAAAGGAAGTGAAAAt                                                                                                                                     >  2:1901649/1‑289 (MQ=255)
                                                                                                                                                 ttttttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATgc                                                                                                                                >  1:932221/1‑289 (MQ=255)
                                                                                                                                                  tttttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATgc                                                                                                                                >  1:2070457/1‑288 (MQ=255)
                                                                                                                                                    tttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCt                                                                                                                             <  1:444506/289‑1 (MQ=255)
                                                                                                                                                    tttGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCt                                                                                                                             <  2:1339295/289‑1 (MQ=255)
                                                                                                                                                         ccAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGAcc                                                                                                                         <  2:671316/288‑1 (MQ=255)
                                                                                                                                                         ccAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCa                                                                                                                        <  2:2070457/289‑1 (MQ=255)
                                                                                                                                                              cacgCGGCCATTT‑AGGAATAAAATAAGGAGACGCGTTCCAAGTGCCAACAAAACCAAAAAAAACCACCTCCGGCACCGTCACCCCCACCACGGTCCCAG‑GAAGCCAAAACGGGGAATGACCCACTGGCCCCCGGAGGCCGCCCCTC‑TCCGCCAGCCGC‑CGAACCAACACCGCCAGGGTCACAAACCACCGCCCCAGGGAGCCTGGAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCAc                                                                                                                       <  2:144398/281‑1 (MQ=255)
                                                                                                                                                                  cGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGTAAGACGTACGCAAAGGCAg                                                                                                                                            <  1:1200850/260‑1 (MQ=255)
                                                                                                                                                                   ggCCCATTCAATAATACATGAAGGAAACGAGTTCAATGTCGCAACATAACGAAAAGAACCCCAAT‑CAGAACCAGTAACCAATACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATc                                                                                                                  <  2:966478/285‑1 (MQ=255)
                                                                                                                                                                                 taaATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCcg                                                                                                <  2:1149049/289‑1 (MQ=255)
                                                                                                                                                                                 taaATTAAGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCcg                                                                                                >  1:239565/1‑289 (MQ=255)
                                                                                                                                                                                       aaGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATc                                                                                          <  2:807679/289‑1 (MQ=255)
                                                                                                                                                                                        aGGAGACGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTAt                                                                                                                                  >  2:913174/1‑248 (MQ=255)
                                                                                                                                                                                           agaCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAACCTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCCCATCGCCTACGATCaaa                                                                                       >  2:189148/1‑288 (MQ=255)
                                                                                                                                                                                             aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCt                                                                                                                             >  1:787777/1‑248 (MQ=255)
                                                                                                                                                                                             aCGAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAAc                                                                                     >  1:547765/1‑288 (MQ=255)
                                                                                                                                                                                               gAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCa                                                                                                                        <  1:1561986/251‑1 (MQ=255)
                                                                                                                                                                                               gAGTTCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCa                                                                                                                        >  2:1561986/1‑251 (MQ=255)
                                                                                                                                                                                                  ttCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                                                                                                        <  2:1089666/152‑1 (MQ=255)
                                                                                                                                                                                                  ttCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTa                                                                                                                                                                                                                        >  1:1089666/1‑152 (MQ=255)
                                                                                                                                                                                                  ttCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAAtt                                                                                                                                    >  1:1992124/1‑236 (MQ=255)
                                                                                                                                                                                                  ttCAATGTCGCAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAAtt                                                                                                                                    <  2:1992124/236‑1 (MQ=255)
                                                                                                                                                                                                            cAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTa                                                                     >  1:134567/1‑289 (MQ=255)
                                                                                                                                                                                                            cAACATAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTa                                                                     >  1:511567/1‑289 (MQ=255)
                                                                                                                                                                                                                aTAACGACAAGAACCACCGA‑CAGCACCCGTCACCACGACACGATGCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGCCGGCTCTCATCGTCCAGAGGC‑TGACCCACCACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCg                                                                 <  2:1020594/289‑1 (MQ=255)
                                                                                                                                                                                                                aTAACGAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCg                                                                 <  1:509026/289‑1 (MQ=255)
                                                                                                                                                                                                                     gAAAAGAACCCACAT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CGCCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGGCGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTc                                                            <  2:630976/289‑1 (MQ=255)
                                                                                                                                                                                                                                  aT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATgcg                                                                                                                               >  1:2025693/1‑209 (MQ=255)
                                                                                                                                                                                                                                  aT‑CAGCACCAGTCACCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGa                                               <  1:1598522/289‑1 (MQ=255)
                                                                                                                                                                                                                                   atccgccccaggcaccACTACCCGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGa                                               <  2:239565/275‑1 (MQ=255)
                                                                                                                                                                                                                                        caccagtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGAtt                                          >  1:2118525/10‑289 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGccc                                                                                                                                                                                                <  1:985024/130‑1 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTaa                                                                                                                                                                       >  2:30400/5‑159 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTAtt                                     >  1:1065444/5‑289 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTAtt                                     >  1:2252690/5‑289 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTAt                                      >  2:2255125/5‑288 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTAt                                      >  1:1427377/5‑288 (MQ=255)
                                                                                                                                                                                                                                             gtcaccACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTAt                                      >  1:1232274/5‑288 (MQ=255)
                                                                                                                                                                                                                                                  cACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCg                                                                 >  1:1823960/1‑256 (MQ=255)
                                                                                                                                                                                                                                                            ttCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAac                                                                                                                                                                                                                                            >  2:168192/1‑75 (MQ=255)
                                                                                                                                                                                                                                                            ttCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCg                                                                 >  1:1734313/1‑246 (MQ=255)
                                                                                                                                                                                                                                                            ttCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCg                                                                 <  2:1734313/246‑1 (MQ=255)
                                                                                                                                                                                                                                                             tCCAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGCGGACGCCTCTCATCGTCCAGCGGC‑TGAACCAACCCCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCa                     <  1:1901649/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               cAGCGAAGCGAAACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCAcc                   <  1:1891320/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gcgaagcgaaACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCAccc                  >  1:1009525/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                   gaagcgaaACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACGCa                 <  2:1531169/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                     agcgaaACCGGGGATGGACTCACTGG‑CACCAGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACttt             <  1:1772272/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      gcgaaACCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAGAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTg            >  2:1324884/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          aaCCGGGGATGGACTCACTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAAACAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACTCACTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTGACCa        <  2:2252690/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
GCTTCACTAAACGCATATTAAAAATCAGAAAAACTGTAGTTTAGCCGATTTAGCCCCTGTACGTCCCGCTTTGCGTGTATTTCATAACACCGTTTCCAGAATAGTCTCCGAAGCGGGATCTGGCTGGTGGTCTATAGTTAGAGAGTTTTTTGACCAAAACAGCGGCCCTTTCAGTAATAAATTAAGGAGACGAGTTCAATGAGCCAACATAACGAAAAGAACCCACAT‑CAGCACCAGAGTCCACTACACGATTCCAGCGAAGCGAAACCGGGGATGGACAGTCTGG‑CACCTGAGGACGGCTCTCATCGTCCAGCGGC‑TGAACCAACACCGCCAGGTGCACAACCTACCGCCCCAGGGAGCCTGAAAGCCCCTGATACGCGTAACGAAAAACTTAATTCTCTGGAAGACGTACGCAAAGGCAGTGAAAATTATGCGCTGACCACTAATCAGGGCGTGCGCATCGCCGACGATCAAAACAGTCTGCGTGCCGGTAGCCGTGGTCCAACGCTGCTGGAAGATTTTATTCTGCGCGAGAAAATCACCCACTTTGACCATGAGCG  >  CP042583/1495620‑1496179

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A