Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,522,631 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,522,6310AT99.6% 613.2 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (128/129);  minor base C (1/0);  total (129/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,522,6320GC99.6% 612.3 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (129/128);  total (129/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,522,6330TA99.2% 602.9 / NA 259intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  major base A (127/128);  minor base C (1/1);  total (129/130)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 259 total aligned reads displayed.

CCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCAAGCCTGGTGAGCATTCGTAGCTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑AGCACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGGCTCTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCA  >  CP042583/1522355‑1522912
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                         
ccGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCg                                                                                                                                                                                                                                                                                 >  1:2222171/1‑289 (MQ=255)
   cAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGc                                                                                                                                                                                                                                                                               >  2:573707/1‑288 (MQ=255)
    aGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCa                                                                                                                                                                                                                                                                              >  1:109124/1‑288 (MQ=255)
                      aaCAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCg                                                                                                                                                                                                                                                            <  2:2222171/288‑1 (MQ=255)
                      aaCAGGCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCg                                                                                                                                                                                                                                                            <  1:195155/288‑1 (MQ=255)
                       aCAGGCCCGGGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGGACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGaa                                                                                                                                                                                                                                                          <  1:11997/289‑1 (MQ=255)
                           gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                                                                                                                                                                                                                                      >  2:935496/1‑289 (MQ=255)
                           gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCt                                                                                                                                                                                                                                                      >  1:1780152/1‑289 (MQ=255)
                           gCCCGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGGTGGGGACACGCGGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATAGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTATCATTCTACTGCGGCACCGGCTGGCGTGCGTCCGAAACCt                                                                                                                                                                                                                                                      >  1:1101377/1‑289 (MQ=255)
                             ccGTGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTAATGCGGCACCGGCCGGCGCGCGTCCCAAACCttt                                                                                                                                                                                                                                                    >  2:522724/1‑289 (MQ=255)
                                tGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATg                                                                                                                                                                                                                                                 >  1:1239942/1‑289 (MQ=255)
                                tGGACTGCTGCATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGGGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCAAGCGCAGCGCCGATGAGATTACCGCACAGTGGAAAGCGGGGAAGATCAAACCAGAGCAGCAAGCTTCATTCTAGTCCGGCCACGGCTGGCGCGCGCCCGAAACCTCTATg                                                                                                                                                                                                                                                 >  2:60941/1‑289 (MQ=255)
                                       ctgcATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTc                                                                                                                                                                                                                                                              >  1:19875/1‑269 (MQ=255)
                                       ctgcATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcac                                                                                                                                                                                                                                          >  1:1118884/1‑289 (MQ=255)
                                       ctgcATCGCCAGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgca                                                                                                                                                                                                                                           >  1:162855/1‑288 (MQ=255)
                                             cGCCAGGAGGCATGTCTTGGGAGGATTCGTTCGGGGCAAGAATTTATCGGTACGACAAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGGTCGTTGGGGCAAGGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAAGATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCa                                                                                                                                                                                                                                    <  2:1698075/289‑1 (MQ=255)
                                                 aGGATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                                                                                                                                                                                                                >  1:101315/1‑289 (MQ=255)
                                                  ggATGCATCGCTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGa                                                                                                                                                                                                                                                           >  2:1873435/1‑261 (MQ=255)
                                                   gatgcatcgcTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgca                                                                                                                                                                                                                                           <  1:1169813/267‑1 (MQ=255)
                                                    atgcatcgcTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATggg                                                                                                                                                                                                                                <  2:105580/278‑1 (MQ=255)
                                                          cgcTGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGCAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCCTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAACCCTTTTTTTCCGCCGGCGCCATGGTGTGgaacca                                                                                                                                                                                                                       >  2:842648/3‑286 (MQ=255)
                                                             tGGTGAGCATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGGCCGACACCTTTATTTACGCACGCGCCATGGGCTgtcccctat                                                                                                                                                                                                                     >  2:1169813/1‑280 (MQ=255)
                                                                  aGCATTCGTTCGTGGCCAGAATTCATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGGCCGACACCTTTATGTACGCACGCGCCAAGGGTTGGAAGAATGATTCCg                                                                                                                                                                                                               >  2:1723377/1‑289 (MQ=255)
                                                                    cATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGCTGATATTACCGATATGTGGAAAGCGTGGACTATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGACACCTTTATGTACGCACGCGCACTGGGGTGAGAGAATGtctc                                                                                                                                                                                                                 >  2:456763/1‑285 (MQ=255)
                                                                    cATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGTAAGAATGGTTCCgtg                                                                                                                                                                                                             >  1:646643/1‑289 (MQ=255)
                                                                    cATTCGTTCGTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCAAATGGAAGATTTTCATAACCCGGATCGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTGTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATTTACCCACGCGCCATGGGTTGGAAGAATGTATCCatg                                                                                                                                                                                                             >  1:1977035/1‑289 (MQ=255)
                                                                                 ccAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCCCGCGTCCGAAACCTTTATTTTCGCACCCGCCATGGGTTGGCAGAATGTTTCCGTGTATGTcggcg                                                                                                                                                                                                   >  2:687735/1‑286 (MQ=255)
                                                                                     aaTTTATCCGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGAAACGCTAGTAGCGAC‑TCGACGCATAAGGAAGATATTCATAACCCGGATGCGACCATGCGCAGAGCCGATGAAATTAACGCTATGTGGAAAGCGCGGAATAACCAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCACGCGCACGAACCCTTTATCTACGCACCGGCCATGGGTTGTAAGAATGTTTCCGGGTATGAccgaggtcggt                                                                                                                                                                                             >  2:1366665/1‑278 (MQ=255)
                                                                                          aTCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAATCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCCGCACCGGCAGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGCTGGAAGCATTGTTCCGTGTCAGACCTCGGCTGGCTACGat                                                                                                                                                                                       >  2:1537401/1‑288 (MQ=255)
                                                                                                       gCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGagca                                                                                                                                                                                <  1:1854552/282‑1 (MQ=255)
                                                                                                                   atatTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGt                                                                                                                                                             >  1:586047/1‑289 (MQ=255)
                                                                                                                    tatTAAACCAAAAGGTGAAATATCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCTACTCATATGTAATATTGTCATAACCCCGATTCCACCATGCGCAACACCGAGTAAAATAACGCTATGTTGAAATCTTGGAATATCAAACCAAAGCAGCAAACACCACTCTAGCAAAGAAAAGGATGGTACGTGAAAAAAAGGAAAAGGTAAACAAGAGCCAGGGGGTGGAAGTAGGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGagca                                                                                                                                                                                >  2:2105831/1‑269 (MQ=255)
                                                                                                                     atTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTTATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGTCGGCTGG‑TACGAATGGAGCAGCGAGCCAAAAACTCCGGTa                                                                                                                                                            >  2:149610/1‑288 (MQ=255)
                                                                                                                       acaaCCCAAAGGTGAAATAGCCGGCGTCCGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCTGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGAAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCa                                                                                                                                                         <  2:1239942/287‑1 (MQ=255)
                                                                                                                           ccAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCATGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCg                                                                                                                                                     >  2:876123/1‑289 (MQ=255)
                                                                                                                           ccAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAAGGTTTCCGTGTATGACGGCGGGCGG‑TACCAATGGGGCAGCGATCCAAAAAATCCGGTAGCCACCg                                                                                                                                                     >  2:710844/1‑289 (MQ=255)
                                                                                                                              aaaGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTacgcacg                                                                                                                                                                                                                                         <  1:976104/203‑1 (MQ=255)
                                                                                                                              aaaGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGt                                                                                                                                                                                                                               <  1:89007/213‑1 (MQ=255)
                                                                                                                              aaaGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTg                                                                                                                                                  >  2:1136651/1‑289 (MQ=255)
                                                                                                                              aaaGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTg                                                                                                                                                  >  2:327299/1‑289 (MQ=255)
                                                                                                                                  gggagaTAGCCGGCGAACGTTGTGGACGAGATGGTCGCGAC‑TGTACGCATATGGAAGAGTTTCATAACCGGGATGGCACCATGCGCAGCGCGGATGATATTACCGATATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  2:1185185/283‑1 (MQ=255)
                                                                                                                                  gTGAAATAGCCGGCTCACGTTGGGGACACTCTGGTAGCGAC‑TCGTCGCATATGTAAAGTTTTCATACCCCGGATGGAACCATGCTCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGGCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGTATGTTTCCGTGTATGCCGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  2:1318354/288‑1 (MQ=255)
                                                                                                                                  gTGAAATAGCCGGCGCACGTTGGGGACACGGTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGGGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  2:1085643/288‑1 (MQ=255)
                                                                                                                                   tGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  1:1723377/287‑1 (MQ=255)
                                                                                                                                   tGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  1:1682559/287‑1 (MQ=255)
                                                                                                                                   tGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAAc                                                                                                                                               <  1:2029104/287‑1 (MQ=255)
                                                                                                                                      aaTAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGc                                                                                                                                          <  1:1867705/289‑1 (MQ=255)
                                                                                                                                         aGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCg                                                                                                                                       <  1:480139/289‑1 (MQ=255)
                                                                                                                                            cggcggACGTTGGGCAAACGCTGGTAACGGCTCGCA‑GCATATGGGATAATTTCGTAAGCGGGATGGAACCAAGCGCAGCTCCGATGAAACTACCGATATGTGGAATGCGTGGAATATCAAACTAGAACAGAAAGTTTCAGTCTACTGCGGCATCGGCAGGTGCGCGTCCGAATCCTTTAGGTACGGACGCGCGATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCTGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGa                                                                                                                                     <  2:1252768/288‑1 (MQ=255)
                                                                                                                                                         ggACACGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCt                                                                                                                                                                                                <  2:1867341/217‑1 (MQ=255)
                                                                                                                                                              cGCTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGc                                                                                                                  <  1:767142/289‑1 (MQ=255)
                                                                                                                                                                cTGGTAGCGAC‑TCGACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCaa                                                                                                                >  1:2146924/1‑289 (MQ=255)
                                                                                                                                                                        cgactcgaCGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTg                                                                                                          >  1:1554785/8‑288 (MQ=255)
                                                                                                                                                                          actcgaCGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGc                                                                                                                                                          <  1:258261/233‑1 (MQ=255)
                                                                                                                                                                          actcgaCGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCACACGGTGAACGCGGCCCGGACAGTAGCAAAAAACATTGCAATTACTGAc                                                                                                        >  2:48982/6‑288 (MQ=255)
                                                                                                                                                                                     atGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAgcgact                                                                                            >  1:748646/1‑284 (MQ=255)
                                                                                                                                                                                          aGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAgcgacctcag                                                                                        >  1:2183645/1‑279 (MQ=255)
                                                                                                                                                                                          aGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAg                                                                                        <  1:710844/288‑1 (MQ=255)
                                                                                                                                                                                             ttttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTc                                                                                    >  1:538258/1‑289 (MQ=255)
                                                                                                                                                                                             ttttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAACGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACCAACGGTGGAGGGACTTCacggtc                                                                                    >  2:1499317/1‑284 (MQ=255)
                                                                                                                                                                                              tttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACGGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCa                                                                                   <  2:2070816/289‑1 (MQ=255)
                                                                                                                                                                                               ttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGa                                                                                                                                     <  1:1619797/238‑1 (MQ=255)
                                                                                                                                                                                               ttCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGa                                                                                                                                     >  2:1619797/1‑238 (MQ=255)
                                                                                                                                                                                                tcgaagcccGGATGGCACAAGGAGCAGCGCCGATGATAGTACCGTTATGTGGAAAGGGGGGAATATCAAACCAGCGCAGCAATTTTCATTCGCCGGCGGCACCGGCTGGCGGGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAgt                                                                                 <  2:1999578/283‑2 (MQ=255)
                                                                                                                                                                                                tCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGa                                                                                 >  1:400233/1‑289 (MQ=255)
                                                                                                                                                                                                 cATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCa                                                                                   <  1:1078276/286‑1 (MQ=255)
                                                                                                                                                                                                    acaccGGAGGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  2:777313/286‑1 (MQ=255)
                                                                                                                                                                                                    aaCCCGGATGGCACGAGACGCAGCGCACATGCTATTACCGCTATGGGGAAAGCGTGGAATATCAAACCAGGGCAGCAAGTTTGATTCTACTGCGGAACCGGCTGGCGCGCGTCCGAGGCCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  2:266113/289‑1 (MQ=255)
                                                                                                                                                                                                    aaCCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  2:101315/289‑1 (MQ=255)
                                                                                                                                                                                                    aaCCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  1:1936956/289‑1 (MQ=255)
                                                                                                                                                                                                    aaCCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGGGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  1:318866/289‑1 (MQ=255)
                                                                                                                                                                                                    aaCCCGGATGGCACCAGAGGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTGCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATAcc                                                                             <  2:1672741/289‑1 (MQ=255)
                                                                                                                                                                                                           aTGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTTCAATTACATACGCTGGAGCGACTTCCGCGTCAGATACCCACTcc                                                                       >  2:1848137/1‑288 (MQ=255)
                                                                                                                                                                                                               cACCATGCGCAGGGCGTATGAGATTACCGTTATGTGGAAAGCGTGAAATATGAAACCAGAGAAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCacac                                                                   <  2:2178172/288‑1 (MQ=255)
                                                                                                                                                                                                                    tGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCCGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAAAAACATTGCAATTACTGACGCTGGAGCGCCTTCAGCGTCAGATACACACGCAACACCCGCGt                                                             >  2:1926660/1‑289 (MQ=255)
                                                                                                                                                                                                                    tGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGc                                                                                                                                          >  1:36365/1‑212 (MQ=255)
                                                                                                                                                                                                                    tGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGc                                                                                                                                          <  2:36365/212‑1 (MQ=255)
                                                                                                                                                                                                                    tGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGGCAGATACCCACTCCACACCcccgc                                                             >  2:227313/1‑288 (MQ=255)
                                                                                                                                                                                                                     gcgcAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGa                                                                                                                                     >  1:513285/1‑216 (MQ=255)
                                                                                                                                                                                                                           cgcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGcc                                                                                                                                         >  1:2038146/1‑206 (MQ=255)
                                                                                                                                                                                                                            gcCGATGTTATTACCGCTATGTGGAAAGACTGGAACATCAAACCAGGGCAGCAAGTTTCATTCTACGGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                     <  2:1099851/289‑1 (MQ=255)
                                                                                                                                                                                                                            gcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                     <  1:1031951/289‑1 (MQ=255)
                                                                                                                                                                                                                            gcCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                     <  1:2229378/289‑1 (MQ=255)
                                                                                                                                                                                                                            gcCAATAATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                     <  1:291821/289‑1 (MQ=255)
                                                                                                                                                                                                                             ccGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGgtcg                                                     <  2:400233/288‑1 (MQ=255)
                                                                                                                                                                                                                                 tgatATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATc                                                <  1:935496/289‑1 (MQ=255)
                                                                                                                                                                                                                                 tgatATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATc                                                <  1:1499317/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aCCGCTATGTTGAAAGCTTCTAATATCAAACCAGAGCAGCAAGTTTCATTCTACGACGGCACCGGCGGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACACTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGcaca                                        <  1:849774/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aCCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCAACACCCGCGTAAAGGTCGTCATCC‑AGcaca                                        >  1:2109270/1‑289 (MQ=255)
                                                                                                                                                                                                                                           gCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACg                                     <  1:1407456/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tgtgGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGAt                                                                                <  2:1038667/243‑1 (MQ=255)
                                                                                                                                                                                                                                               tgtgGAAAGCGTGGAATATCAAACAAGAGCAGCAAGTTTCATTCTACTGCGGCCCCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCAGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGAAGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑CGCCCAACGCAcc                                 >  1:135974/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aaaGCGTAGAATATCAAACCAGAGCAGAAAGTTTACTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCAATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGa                            <  2:2033877/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      aGCGTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCCGATACCCACTCCCCCCCCGCGTAAAGGTCGTCATCCAAGCAC‑ACCCACCGAAGaa                           >  2:1947241/1‑287 (MQ=255)
                                                                                                                                                                                                                                                         gTGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATccac                       >  1:1912175/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          tGGAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATccac                       >  2:281075/1‑288 (MQ=255)
                                                                                                                                                                                                                                                           ggAATATCAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTCAAGGTCGTCATCC‑AGCACAACCCACCGACGATccacca                     >  2:1272711/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                  cAAACCAGAGCAGCAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATccacgcaaacca               >  2:766661/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                          agcagcAAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACg                                     >  1:1260685/1‑258 (MQ=255)
                                                                                                                                                                                                                                                                              gcaAGTTTCATTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGCGACTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCa  <  2:920454/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                         
CCGCAGTTGATGCTCGATATGGAACAGGCCCGTGGACTGCTGCATCGCCAGGATGCAAGCCTGGTGAGCATTCGTAGCTGGCCAGAATTTATCGGTACGACCAGCGGTTACAGCTATATTAAACCAAAAGGTGAAATAGCCGGCGCACGTTGGGGACACGCTGGTAGCGAC‑AGCACGCATATGGAAGATTTTCATAACCCGGATGGCACCATGCGCAGCGCCGATGATATTACCGCTATGTGGAAAGCGTGGAATATCAAACCAGAGCAGCAAGTTAGTTTCTACTGCGGCACCGGCTGGCGCGCGTCCGAAACCTTTATGTACGCACGCGCCATGGGTTGGAAGAATGTTTCCGTGTATGACGGCGGCTGG‑TACGAATGGAGCAGCGATCCAAAAAATCCGGTAGCAACCGGTGAACGCGGCCCGGACAGTAGCAAATAACATTGCAATTACTGACGCTGGAGGCTCTTCAGCGTCAGATACCCACTCCACACCCGCGTAAAGGTCGTCATCC‑AGCACAACGCACCGAAGATCCACGCAAACCACGCAAACCATGCA  >  CP042583/1522355‑1522912

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A