Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,607,343 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,607,3430AT99.3% 643.4 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (135/135);  minor base G (2/0);  total (138/135)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,607,3440GC99.6% 646.5 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (138/134);  minor base A (0/1);  total (138/135)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,607,3450CG100.0% 646.3 / NA 273intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (138/135);  total (138/135)

Only 100 of 273 total aligned reads displayed.

TGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGAGCTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAATCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGT  >  CP042583/1607064‑1607619
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
  gTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTtgatga                                                                                                                                                                                                                                                                             <  2:1471018/287‑1 (MQ=255)
   tATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATgacg                                                                                                                                                                                                                                                                           >  1:1543337/1‑288 (MQ=255)
        cgcgCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTTATGACGCCCtt                                                                                                                                                                                                                                                                      >  1:64592/1‑288 (MQ=255)
        cgcgCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTc                                                                                                                                                                                                                                                                     >  1:482156/1‑289 (MQ=255)
             aTAACGCCAGCTTTGACCGCGGATTACTGCCGGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTGGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  2:2152356/288‑1 (MQ=255)
             aTAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:1226517/288‑1 (MQ=255)
                 cGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACTGCAGAACAGATGGCCGATATCCCCGGACCTCCGGCGTTGATGACGACCTTCACCTTTGGc                                                                                                                                                                                                                                                            >  2:218645/1‑289 (MQ=255)
                  gCCAGCTTGGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCa                                                                                                                                                                                                                                                           <  2:961905/289‑1 (MQ=255)
                       cTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCaaaaa                                                                                                                                                                                                                                                       >  2:2039552/1‑286 (MQ=255)
                                 cgcgTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATTAACACCTCCGGCTGGCCGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGCTGACGCCCTTCACCTTTGCCAAATACCGTTGCaca                                                                                                                                                                                                                                             >  2:566062/1‑286 (MQ=255)
                                 cgcgGACTGGCTGGGAGGCCCGGTGAGTGAATTTGCACTATGAAACTGGCCCTTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTCCA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAg                                                                                                                                                                                                                                            <  2:1744837/289‑1 (MQ=255)
                                      tgtGCGTGAGACGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGGTGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACCCGCAAGCTCAATGTACC‑GACGCCGCCGGGCCTGCATCATCCCCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGtt                                                                                                                                                                                                                                       <  2:230896/287‑1 (MQ=255)
                                                        tGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGCAcgc                                                                                                                                                                                                                     >  1:1344000/1‑289 (MQ=255)
                                                           gTGGATTTGCACTATGAAACTGGCCCTTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAACACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGa                                                                                                                                                                                                                   <  1:169322/288‑1 (MQ=255)
                                                             ggATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATc                                                                                                                                                                                                                 <  2:946693/288‑1 (MQ=255)
                                                                    cACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCt                                                                                                                                                                                                                                                                       <  1:2091137/227‑1 (MQ=255)
                                                                      cTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTa                                                                                                                                                                                                          >  1:187527/1‑286 (MQ=255)
                                                                         tGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGCACGCGATCCGGGCTATCTgc                                                                                                                                                                                                     >  1:26602/1‑288 (MQ=255)
                                                                                 gCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTAt                                                                                                                                                                                            >  1:1888844/1‑289 (MQ=255)
                                                                                   ccGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTAttt                                                                                                                                                                                          >  2:1260109/1‑289 (MQ=255)
                                                                                    cgtcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:534312/289‑1 (MQ=255)
                                                                                    cgtcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:1260109/289‑1 (MQ=255)
                                                                                    cgtcgtTTGTGGCCAGGGATAAAGTAAAGCAATATGGAGTTATATAAAACACGCAAGCTCAATGAACA‑GACGCCGCCGTGCCTGCATCATAACCGCGCGTTGTATGACTGTTATATCACCGGCGCGTTGCGTAGCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:290954/289‑1 (MQ=255)
                                                                                       cgtTTGTGACCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:1612037/286‑1 (MQ=255)
                                                                                            gtgGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTg                                                                                                                                                                                 <  2:1543337/289‑1 (MQ=255)
                                                                                              ggCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGa                                                                                                                                                                               <  1:1286431/289‑1 (MQ=255)
                                                                                               gCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGa                                                                                                                                                                               <  1:924494/288‑1 (MQ=255)
                                                                                                   gggATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCa                                                                                                                                                                          >  1:521854/1‑289 (MQ=255)
                                                                                                     gATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCAt                                                                                                                                                                         <  1:597757/288‑1 (MQ=255)
                                                                                                         aaGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGcc                                                                                                                                                                    <  2:521854/289‑1 (MQ=255)
                                                                                                         aaGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGcc                                                                                                                                                                    <  1:1461015/289‑1 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCAc                                                                                                                                                                                                                                                                   <  2:861395/186‑1 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:498541/188‑1 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 >  2:498541/1‑188 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:353751/260‑1 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCt                                                                                                                                                             >  1:1485049/1‑288 (MQ=255)
                                                                                                                  aaTATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCt                                                                                                                                                             <  1:240215/287‑1 (MQ=255)
                                                                                                                      tGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:2185447/183‑1 (MQ=255)
                                                                                                                      tGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGCCGTTGCCGAACGCGACCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGAAAGCATGACCCCGGACCCGCGttt                                                                                                                                                       >  2:36421/1‑289 (MQ=255)
                                                                                                                      tGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAg                                                                                                                                                               >  1:768764/1‑281 (MQ=255)
                                                                                                                         cGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGGCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATTACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGAGCCGGGCTATGTGCGCGGGGTATTTACTAACCTGGACAGCATGAGCCCGGTGCTGCGGTTAac                                                                                                                                                    >  2:223671/1‑289 (MQ=255)
                                                                                                                           ttATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAg                                                                                                                                                               >  2:2106498/1‑276 (MQ=255)
                                                                                                                            tgaagaaaaCCGGCAAGCACAATGTACACGACG‑GGCCGGCACTGATGCATCACCGATCGTTGTATGAGTGTTATAACACCGCCGTGTTGCTGATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACt                                                                                                                                                 <  2:1781047/284‑1 (MQ=255)
                                                                                                                                        gCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGa                                                                                                                                                                                                                   <  1:1419690/211‑1 (MQ=255)
                                                                                                                                        gCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTa                                                                                                                                        >  1:65824/1‑286 (MQ=255)
                                                                                                                                        gCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGAACTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGa                                                                                                                                                                                                                   >  2:1419690/1‑211 (MQ=255)
                                                                                                                                             gcccaatgtctctccgccgcGGGGCCTGCATCATCTCCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACCCCTCCGGCTGGACGGCAGAACAGATAGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGaa                                                                                                                                 <  2:291201/275‑1 (MQ=255)
                                                                                                                                                  tGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTaa                                                                                                                                                     <  1:2191447/263‑1 (MQ=255)
                                                                                                                                                  tGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGACCCCGGAGCTGCGTTTAACACTGAACCATTACCTTGAAAATACt                                                                                                                           >  2:1674845/1‑289 (MQ=255)
                                                                                                                                                             ccgccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTTGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATCACCTGGACAGCCTGAGCCCGGCGCTGCGTTTAACACTTAAACa                                                                                                                                           >  2:2191447/1‑263 (MQ=255)
                                                                                                                                                               gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAg                                                                                                                                                                                                                                            >  1:2135416/1‑164 (MQ=255)
                                                                                                                                                               gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAg                                                                                                                                                                                                                                            <  2:2135416/164‑1 (MQ=255)
                                                                                                                                                               gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGt                                                                                                                                                                                               >  1:810979/1‑209 (MQ=255)
                                                                                                                                                               gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGt                                                                                                                                                                                               <  2:810979/209‑1 (MQ=255)
                                                                                                                                                                  gggCCTGCATCATCACCGCGCTTTGTATGAGTGTTATATCTCCCCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTa                                                                                                            <  2:1861717/289‑1 (MQ=255)
                                                                                                                                                                   ggCCTGCATCCTCAGCGCGCGTTGTATGACTGGTATAGCGCCGCCGCGGTGCTTATCGATATGATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCATCGTTGATGACGACCGTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGATATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTa                                                                                                            <  2:259984/288‑1 (MQ=255)
                                                                                                                                                                              tcaCCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:469252/200‑1 (MQ=255)
                                                                                                                                                                              tcaCCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTACCACCGAAACATTTTCTGGCAAAAACTTAGTCCGCAGGCGCAGCTGGTAAGGt                                                                                                 >  2:3373/1‑288 (MQ=255)
                                                                                                                                                                                 ccGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTccc                                                                                             <  2:1641231/289‑1 (MQ=255)
                                                                                                                                                                                  cgcgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGtt                                                                                                                                                                                              >  1:1816048/1‑191 (MQ=255)
                                                                                                                                                                                    cgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTg                                                                                           >  1:2041840/1‑288 (MQ=255)
                                                                                                                                                                                        ttgatgaaCTGTTTGATCACCGCCGCGTTGCTTATGGATATTCTGAACCCCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGCCGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGcc                                                                                       <  2:2111205/281‑1 (MQ=255)
                                                                                                                                                                                        ttGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCa                                                                                      >  2:280022/1‑289 (MQ=255)
                                                                                                                                                                                         tGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCa                                                                                      >  1:1852449/1‑288 (MQ=255)
                                                                                                                                                                                                cTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGAc                                                                               <  1:329993/288‑1 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 >  1:926971/1‑107 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCt                                                                                                                                                             <  1:1749588/207‑1 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAAc                                                                                                                                            <  2:83485/224‑1 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  1:989665/1‑289 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  2:1915928/1‑289 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  1:215314/1‑289 (MQ=255)
                                                                                                                                                                                                   ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGCTTAACACTGAAACATTATATGGAAAATACATAGTCCGCAGTCGTACCGGGTAACGTTCACTGCGCCCGCGCCACCAGa                                                                           >  2:1018336/1‑289 (MQ=255)
                                                                                                                                                                                                   tataatCACCGCGGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           <  1:955818/285‑1 (MQ=255)
                                                                                                                                                                                                           ccgccgCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata                                                                   >  1:1382072/1‑289 (MQ=255)
                                                                                                                                                                                                           ccgccgCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata                                                                   >  1:2243852/1‑289 (MQ=255)
                                                                                                                                                                                                           ccgccgCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTCTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata                                                                   >  2:656206/1‑289 (MQ=255)
                                                                                                                                                                                                             gccgcGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGAAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCatat                                                                  >  2:482312/1‑288 (MQ=255)
                                                                                                                                                                                                                                ttatGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTc                                                                                                                                                                                                                                     >  2:1338679/1‑106 (MQ=255)
                                                                                                                                                                                                                                        acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCt                                                         >  2:407277/1‑270 (MQ=255)
                                                                                                                                                                                                                                        acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTacgatttaa                                      >  1:2004352/1‑281 (MQ=255)
                                                                                                                                                                                                                                               gCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGAcc                               >  1:1013383/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ggACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGa                            >  2:740351/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aCGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt                          >  1:1179612/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    aCGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt                          >  2:1560108/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            aCAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGACTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCa                  <  1:2111195/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCAGAAGGCCGATATCACCGGACGTCAGTCGTTGATGACGACCTTAACCTTTGGCGAATACCGTGGGATGCCGGTTTCCGACGTTGCCGTACGCGATCCGGGCTTTCTGCGCTGGTAATTTAAGAACCTGGAGAGCATGGGCCCGGAGCGGCGTTTAACACTGATACATTATCTGGAAAATACTTAGTCCGCCGGCGTAGCAGGTAAGGTACCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCa                  <  2:1368087/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                  ggCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATgg               >  1:1943265/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                   ggcGATACCACCGGACGTCCGTCGTAGGTGACGACCTACACCTTGGGCCAATACCGTGGCAAAGCGGTTTACGACGTGGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGGGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcct            <  2:64592/286‑2 (MQ=255)
                                                                                                                                                                                                                                                                   accGATATCACCGGCGGGCCGTAGTTGATGACGACCTTCAGCTGTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcct            <  2:1219757/287‑2 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtcc      >  1:1975193/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  2:1592831/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:1244843/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:1674845/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:852307/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                        tatCACCGGACGTCCGTCGTTGATGACGACATTCACATTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:1662095/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                        taccgccGGACGTCCGTCGTTGATGACGACCTTCACCTGTGGCAAATACCGGGGCAAAGCGGTTTCCGACGTTGCCGGACGCGATCCGGGCTATGTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  2:1888844/283‑7 (MQ=255)
                                                                                                                                                                                                                                                                         atCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtcca     <  1:1565009/289‑9 (MQ=255)
                                                                                                                                                                                                                                                                            aCCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGCCTGAGTCCATGt  <  1:405943/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ccGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       >  1:374090/1‑277 (MQ=255)
                                                                                                                                                                                                                                                                             ccGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  2:374090/283‑7 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
TGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACA‑GACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGAGCTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAATCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGT  >  CP042583/1607064‑1607619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A