Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,607,343 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,607,3430AT98.6% 650.4 / NA 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  major base T (145/128);  minor base G (3/1);  total (149/129)
Fisher's exact test for biased strand distribution p-value = 6.26e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,607,3440GC98.9% 649.5 / ‑2.8 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (147/128);  minor base T (2/1);  total (149/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.52e-01
*CP0425831,607,3450CG100.0% 648.6 / NA 278intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (149/129);  total (149/129)

Only 100 of 278 total aligned reads displayed.

TGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGAGCTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAATCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGT  >  CP042583/1607064‑1607619
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
  ggaggtgcggcATAAGGCCAGCTTTGACCGCCGCGTACTGGCTGGGATGCCCGGTGAGGGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATgac                                                                                                                                                                                                                                                                            <  2:1062771/279‑1 (MQ=255)
   tATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTtgatga                                                                                                                                                                                                                                                                             <  2:662717/286‑1 (MQ=255)
   tATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTtgatga                                                                                                                                                                                                                                                                             >  1:662717/1‑286 (MQ=255)
   tATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATgacg                                                                                                                                                                                                                                                                           >  1:943622/1‑288 (MQ=255)
     tGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATgacga                                                                                                                                                                                                                                                                          >  1:1044376/1‑287 (MQ=255)
          cgcATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATCTTCTGAACACCTCCGGCTGGACGGCACAACAGATGGCCGCTATCCCAGGACGTCCGACGTTTACGACGACCGTCa                                                                                                                                                                                                                                                                    >  2:422253/1‑288 (MQ=255)
             aTAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:355466/288‑1 (MQ=255)
             aTAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:489020/288‑1 (MQ=255)
             aTAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  1:1655658/288‑1 (MQ=255)
                 cGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATAACCGCCGCGTTGCTTATCGCTATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGACGATATAACCAGACGTCCGTCGTTGATTACGACCTTCACCTTTgtc                                                                                                                                                                                                                                                            >  1:1731014/1‑287 (MQ=255)
                   ccAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATAACACCGGACGTCCGGCGTTGATGACGACATTCACCTTTGGCaa                                                                                                                                                                                                                                                          >  1:1471815/1‑289 (MQ=255)
                     aGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCCCCTTTGGCAAAt                                                                                                                                                                                                                                                        >  2:1141942/1‑289 (MQ=255)
                                 cgcgTACTGCCTGGGATGCCCGGTGAGTGGATTTGCACTATGAACCGGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAg                                                                                                                                                                                                                                            <  2:840161/289‑1 (MQ=255)
                                               gaTGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGtt                                                                                                                                                                                                                              >  1:91311/1‑289 (MQ=255)
                                                    ccGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 >  1:988269/1‑249 (MQ=255)
                                                    ccGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCt                                                                                                                                                                                                                                                                 <  2:710424/249‑1 (MQ=255)
                                                        tGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAAcgc                                                                                                                                                                                                                     >  1:1209591/1‑289 (MQ=255)
                                                                    cACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTa                                                                                                                                                                                                          >  1:1902093/1‑288 (MQ=255)
                                                                      cTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTa                                                                                                                                                                                                          >  1:815614/1‑286 (MQ=255)
                                                                         tGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTgc                                                                                                                                                                                                     >  1:948516/1‑288 (MQ=255)
                                                                              cTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGt                                                                                                                                                                                               >  1:1031825/1‑289 (MQ=255)
                                                                                 gCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCaaa                                                                                                                                                                                                                                                         <  1:1322290/228‑1 (MQ=255)
                                                                                    cgtcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  2:564785/289‑1 (MQ=255)
                                                                                    cgtcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:422253/289‑1 (MQ=255)
                                                                                    cgtcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:586971/289‑1 (MQ=255)
                                                                                      tcgtTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGCTCCGGGCTATCTGCGCTGGTTTTTcaat                                                                                                                                                                                       >  2:1405449/1‑289 (MQ=255)
                                                                                                    ggATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCAt                                                                                                                                                                         >  2:323193/1‑289 (MQ=255)
                                                                                                     gATCAAGATCAGCAATATGGCGTTATCAAAACCACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCTCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCAt                                                                                                                                                                         <  2:1653728/288‑1 (MQ=255)
                                                                                                         aaGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGcc                                                                                                                                                                    <  2:1984397/289‑1 (MQ=255)
                                                                                                              cAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGTTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGa                                                                                                                                                                >  1:68140/1‑288 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGTCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAAAAACCTGGa                                                                                                                                                                               <  1:628468/270‑1 (MQ=255)
                                                                                                                 cAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGAACCGGGCTATCTGCGCTGGGTAGTTAGTAACCTGGGCAGACTGAGCCCGGAGCTg                                                                                                                                                            >  2:687503/1‑289 (MQ=255)
                                                                                                                    tatGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGt                                                                                                                                                         >  2:1133122/1‑289 (MQ=255)
                                                                                                                    tatGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTG‑TATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGaa                                                                                                                                                                                                                        <  1:531459/225‑1 (MQ=255)
                                                                                                                     atGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGAGTTGCTTATCGATATTATGAACAACTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGATGCCGACGTTTCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGCCCGCATGAGCCTGGAGCTGCggt                                                                                                                                                        >  2:1460377/1‑287 (MQ=255)
                                                                                                                      tGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGgtt                                                                                                                                                       >  2:923210/1‑289 (MQ=255)
                                                                                                                           ttATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCggg                                                                                                                                                                                                             <  1:1776709/230‑1 (MQ=255)
                                                                                                                           ttATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCggg                                                                                                                                                                                                             >  2:1776709/1‑230 (MQ=255)
                                                                                                                            tatataAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGCCAGAACAGATGGACGATATCACCGGACGTCCGGTGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAACGCGCTTTCCGACGTTGCCGACAGCGATCCTGGCTATCTGCGCTGGGTATTTAATCACCTGAACAGCAAGAGACAGGAGCGGCGgttcaaaca                                                                                                                                                 >  2:1419468/1‑283 (MQ=255)
                                                                                                                                   aaCACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  2:1303951/242‑1 (MQ=255)
                                                                                                                                   aaCACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGAGATTATGAACACCTTCGGCTGGACGGCAGAACCGATGGCCGATAGCACCTGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGACCGCGATCCGGGCTAACTGCGCTGGATATTTAATAACCTGGACAGCAGGAGCCCGGAGCTGCGTTTAacgtggaaacct                                                                                                                                          >  2:879167/1‑279 (MQ=255)
                                                                                                                                      acGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTAt                                                                                                                                       <  1:2000926/289‑1 (MQ=255)
                                                                                                                                      acGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTAt                                                                                                                                       <  2:946711/289‑1 (MQ=255)
                                                                                                                                        gCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCTGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGCTCGGCGGTTAACACTGAAACATTGTCt                                                                                                                                     >  2:1837980/1‑289 (MQ=255)
                                                                                                                                                      cAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCt                                                                                                                                                                                                                                                                       <  1:241141/145‑1 (MQ=255)
                                                                                                                                                      cAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCt                                                                                                                                                                                                                                                                       >  2:241141/1‑145 (MQ=255)
                                                                                                                                                          cgccgcCGGTCCTACATCATCACCGCGGGGTGTATGACTGTTATACCACCGCCGAGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGGCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCg                                                                                                                    <  2:797496/288‑1 (MQ=255)
                                                                                                                                                          cgccgcCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCg                                                                                                                    >  2:1508374/1‑288 (MQ=255)
                                                                                                                                                          cgccgcCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGc                                                                                                                   <  2:1198884/289‑1 (MQ=255)
                                                                                                                                                              gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGTGCTATCTGCGCTGGTTCTTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAATACTGAAACATTACTTGGAAAATACTTAGTCCGCAGGc                                                                                                               >  2:366862/1‑289 (MQ=255)
                                                                                                                                                              gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAgg                                                                                                                >  2:510359/1‑288 (MQ=255)
                                                                                                                                                              gccgGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGc                                                                                                               >  2:1874133/1‑289 (MQ=255)
                                                                                                                                                                 gggCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTa                                                                                                            <  1:187439/289‑1 (MQ=255)
                                                                                                                                                                       gCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGCGCTAGCGGGt                                                                                                      >  2:1541479/1‑289 (MQ=255)
                                                                                                                                                                                   cgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         >  2:729609/1‑194 (MQ=255)
                                                                                                                                                                                   cgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGc                                                                                                          <  1:1693005/273‑1 (MQ=255)
                                                                                                                                                                                   cgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGc                                                                                                          <  1:893145/273‑1 (MQ=255)
                                                                                                                                                                                   cgcgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTgc                                                                                          >  1:1406043/1‑289 (MQ=255)
                                                                                                                                                                                     cgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         >  2:1263123/1‑192 (MQ=255)
                                                                                                                                                                                     cgTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:1263123/192‑1 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCt                                                                                                                                                             <  2:1721560/207‑1 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCt                                                                                                                                                             >  1:1721560/1‑207 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTaa                                                                                                                                                     >  1:1490800/1‑215 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  1:1967391/1‑289 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  2:1220082/1‑289 (MQ=255)
                                                                                                                                                                                                  ttATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGa                                                                           >  1:1426447/1‑289 (MQ=255)
                                                                                                                                                                                                         aCCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCat                                                                    >  1:1802258/1‑289 (MQ=255)
                                                                                                                                                                                                          ccgccgCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGa                                                                                                                                  <  2:1371602/226‑1 (MQ=255)
                                                                                                                                                                                                          ccgccgCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCata                                                                   >  1:441063/1‑289 (MQ=255)
                                                                                                                                                                                                            gccgcGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATAtt                                                                 >  2:482023/1‑289 (MQ=255)
                                                                                                                                                                                                            gccgcGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCAGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACAAGAAGAGCatat                                                                  >  1:747467/1‑288 (MQ=255)
                                                                                                                                                                                                                cgTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCa                                                              >  1:788823/1‑288 (MQ=255)
                                                                                                                                                                                                                 gTTGCTTATCGATATTGTGAACACCTCCTGCTGGACGGCAGAACAGATGGCCGATATCACCTGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTcc                                                               <  1:598430/286‑1 (MQ=255)
                                                                                                                                                                                                                              attatGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATGTCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGt                                               <  1:508823/289‑1 (MQ=255)
                                                                                                                                                                                                                                   gAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTacgat                                          <  1:1154127/289‑5 (MQ=255)
                                                                                                                                                                                                                                       acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCg                                                                                                                    >  2:1291184/1‑211 (MQ=255)
                                                                                                                                                                                                                                       acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCg                                                                                                                    <  1:1291184/211‑1 (MQ=255)
                                                                                                                                                                                                                                       acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGc                                                                                                          >  1:697564/1‑221 (MQ=255)
                                                                                                                                                                                                                                       acCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTacgatttaa                                      >  2:53906/1‑281 (MQ=255)
                                                                                                                                                                                                                                         cTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTta                                                                                                                                                                                         <  1:1536195/140‑1 (MQ=255)
                                                                                                                                                                                                                                         cTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCggacgagtcaaa                                     >  2:1345746/1‑277 (MQ=255)
                                                                                                                                                                                                                                         cTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTaaa                                     >  2:719275/1‑288 (MQ=255)
                                                                                                                                                                                                                                         cTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTaaa                                     >  1:1234032/1‑288 (MQ=255)
                                                                                                                                                                                                                                         cTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTAAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGaa                                                                                                                                 <  1:1363916/196‑1 (MQ=255)
                                                                                                                                                                                                                                                   aCGGCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGAtt                          >  1:1206186/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     ggCAGAACAGATGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTa                        <  1:360781/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               aTGGCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATgg               >  2:76604/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 ggCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGc                                                                                                          <  1:934425/195‑1 (MQ=255)
                                                                                                                                                                                                                                                                 ggCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcct            <  2:497335/289‑2 (MQ=255)
                                                                                                                                                                                                                                                                 ggCCGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCGTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcct            <  2:1902093/289‑2 (MQ=255)
                                                                                                                                                                                                                                                                    cGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTAt                                                                                                                                       >  2:466503/1‑163 (MQ=255)
                                                                                                                                                                                                                                                                    cGATATCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgag         >  1:113944/1‑285 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:719275/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:310458/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:466546/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  1:557527/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  2:1476612/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                       tatCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGATTTAAAGCGACCAGATTTACCGCCATGGcctgagtc       <  2:617460/288‑7 (MQ=255)
                                                                                                                                                                                                                                                                         tCACCGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTACGCTTTAACGCGACCCGATTTACCGCCATGGCCTGAGTCCAt    >  2:1692858/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cGGACGTCCGTCGTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAGTCCGCAGGCGTAGc                                                                                                          >  2:9658/1‑183 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                  
TGGTATGTCGCGCATAACGCCAGCTTTGACCGCCGCGTACTGCCTGAGATGCCCGGTGAGTGGATTTGCACTATGAAACTGGCCCGTCGTTTGTGGCCTGGGATCAAGTACAGCAATATGGCGTTATATAAAACACGCAAGCTCAATGTACAGACGCCGCCGGGCCTGCATCATCACCGCGCGTTGTATGACTGTTATATCACCGCCGCGTTGCTTATCGATATTATGAACACCTCCGGCTGGACGGCAGAACAGATGGCCGATATCACCGGACGTCCGAGCTTGATGACGACCTTCACCTTTGGCAAATACCGTGGCAAAGCGGTTTCCGACGTTGCCGAACGCGATCCGGGCTATCTGCGCTGGTTATTTAATAACCTGGACAGCATGAGCCCGGAGCTGCGTTTAACACTGAAACATTATCTGGAAAATACTTAATCCGCAGGCGTAGCGGGTAATGTTCCCTGCGCCAGCGCGACCAGAAAAGCATATTCCATCGCTACGCCTTCGTAGCTTTTAAAGCGACCAGATTTACCGCCATGGCCACTGTCCATGT  >  CP042583/1607064‑1607619

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A