Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A0 F0 I1 R1 4926 296.4 4517418 96.8% 4372860 264.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,647,554 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,647,5540GC100.0% 624.7 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (133/128);  total (133/128)
*CP0425831,647,5550CG100.0% 622.6 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (133/128);  total (133/128)
*CP0425831,647,5560TA100.0% 622.1 / NA 261intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (133/128);  total (133/128)

Only 100 of 261 total aligned reads displayed.

TTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCAT  >  CP042583/1647274‑1647833
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
 ttCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaa                                                                                                                                                                                                                                                                                <  1:1225996/289‑1 (MQ=255)
                aaCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                 <  1:1087843/289‑1 (MQ=255)
                aaCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                 <  1:1930404/289‑1 (MQ=255)
                    accGCCGTGGTGACACCCGCACAGGCAATTACGGAGTCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCAGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAACGGCACAGGCGATAACGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGAAGCGCCAGACCCCGATGTAGAAACAGAAGACATCACActct                                                                                                                                                                                                                                                             >  1:546680/1‑289 (MQ=255)
                    accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                 >  1:839169/1‑285 (MQ=255)
                    accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                                                                                                                                                                                              >  1:202672/1‑288 (MQ=255)
                    accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                                                                                                                                                                                              >  1:916246/1‑288 (MQ=255)
                    accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGGAGAAACAGAAGAcagcatcacc                                                                                                                                                                                                                                                              >  2:1891931/1‑284 (MQ=255)
                        ccgTGGTGACACCCGCACAGGAAATTCCGGAGGCGACAGAAAGCTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGACCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCtt                                                                                                                                                                                                                                                         <  2:358524/289‑1 (MQ=255)
                              tgACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGACATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTCATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTCGAAACAGAAGACATACTACTCTCCTTACTCa                                                                                                                                                                                                                                                    >  2:369341/1‑288 (MQ=255)
                                acacCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGc                                                                                                                                                                                                                                                 >  2:85704/1‑289 (MQ=255)
                                  acCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCaa                                                                                                                                                                                                                                               <  1:147698/289‑1 (MQ=255)
                                  acCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCa                                                                                                                                                                                                                                                >  1:713738/1‑288 (MQ=255)
                                       cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                 >  1:1764741/1‑266 (MQ=255)
                                                ttACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACt                                                                                                                                                                                                                                 >  1:654696/1‑289 (MQ=255)
                                                 tACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCACCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCaa                                                                                                                                                                                                                                               >  1:2053377/1‑274 (MQ=255)
                                                      aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                                                                                                                                                                                                >  1:971647/1‑252 (MQ=255)
                                                                 aGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCt                                                                                                                                                                                                                <  1:2169078/289‑1 (MQ=255)
                                                                  ggTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTc                                                                                                                                                                                                               >  1:1880293/1‑289 (MQ=255)
                                                                      aaaGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGt                                                                                                                                                                                                            >  2:557588/1‑288 (MQ=255)
                                                                                  aGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCAt                                                                                                                                                                                               <  2:1189731/289‑1 (MQ=255)
                                                                                    cGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAAACCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCa                                                                                                                                                                                                >  2:1564156/1‑286 (MQ=255)
                                                                                     gAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATct                                                                                                                                                                                             <  2:713738/288‑1 (MQ=255)
                                                                                                 caTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAAATCATACTCTCCTTCCTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCCCCGTGCCTGACCCCCATCTGCCTGCTCGGGTa                                                                                                                                                                                >  2:1375273/1‑289 (MQ=255)
                                                                                                   tGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACg                                                                                                                                                                                                    <  1:1654373/267‑1 (MQ=255)
                                                                                                           gCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACt                                                                                                                                                                                                                                                      <  1:134763/209‑1 (MQ=255)
                                                                                                           gCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACt                                                                                                                                                                                                                                                      >  2:134763/1‑209 (MQ=255)
                                                                                                              accaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGc                                                                                                                                                                   >  1:1197927/1‑289 (MQ=255)
                                                                                                                catccccgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctgcctgc                                                                                                                                                                                       >  1:271533/10‑267 (MQ=255)
                                                                                                                catccccgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctgcctgc                                                                                                                                                                                       <  2:271533/258‑1 (MQ=255)
                                                                                                                catccccgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCCCGTGTAACAATTCACCGGCGa                                                                                                                                                                 >  2:1975207/10‑289 (MQ=255)
                                                                                                                  tccccgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAtt                                                                                                                                                               >  1:1627506/8‑289 (MQ=255)
                                                                                                                  accccgacATGGAAATTGACAGGCCCAACCCTTTCAAATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAtt                                                                                                                                                               <  2:2114045/282‑1 (MQ=255)
                                                                                                                   ccccgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaaga                                                                                                                                                                                                                                                                        <  2:1519247/177‑1 (MQ=255)
                                                                                                                       gacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCg                                                                                                                                                                                    <  2:1816115/261‑1 (MQ=255)
                                                                                                                           tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATCAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTcc                                                                                                                                                      <  2:444088/289‑1 (MQ=255)
                                                                                                                               aaTTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCa                                                                                                                                                  <  2:1627506/289‑1 (MQ=255)
                                                                                                                                        gCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCg                                                                                                                                                                                    <  1:1560279/246‑1 (MQ=255)
                                                                                                                                            aaCCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACg                                                                                                                                                                                                    <  1:2235173/226‑1 (MQ=255)
                                                                                                                                             aCCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCgg                                                                                                                                    >  1:1400571/1‑289 (MQ=255)
                                                                                                                                              cccTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGATGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGGAAGGCTCAGTGCCCGACGCTCCTCTGCCTGCCCGTGTAACAATTCAACGGCGTTTGCACCTTCCCCCACCCCCCCaaacacg                                                                                                                                    >  2:659881/1‑283 (MQ=255)
                                                                                                                                                  ttCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                 >  1:1711050/1‑159 (MQ=255)
                                                                                                                                                  ttCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCgg                                                                                                                                >  2:2094492/1‑288 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaaa                                                                                                                                                                                                                                                                               <  1:305574/144‑1 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaaa                                                                                                                                                                                                                                                                               >  2:305574/1‑144 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACag                                                                                                                                                                                                                                                                            >  2:12679/1‑147 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCg                                                                                                                                                                     >  2:772547/1‑250 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCa                                                                                                                              <  2:1400571/289‑1 (MQ=255)
                                                                                                                                                   tCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCa                                                                                                                              >  1:339665/1‑289 (MQ=255)
                                                                                                                                                        ttAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGcc                                                                                                                         >  1:668277/1‑289 (MQ=255)
                                                                                                                                                        ttAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAATTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGcc                                                                                                                         >  1:2200669/1‑289 (MQ=255)
                                                                                                                                                         tAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCGTGTGTAACAATTCACCGGCGATTTCACCTTCCCGCCTCCCCCCCAACCGGTCGGCCACGCCg                                                                                                                        >  2:114577/1‑289 (MQ=255)
                                                                                                                                                           aagaaggtacgacaaTTAGTGAGAAAAATGGGCAAGGCGATAAAGAGCACCTCAGAGACCTCCATCATGCCGTACTGATCCCAGAAACGCCCGAAGCTGAATGACAACTTAGGTGCGCCAGACGCCGATGTAGAAACATAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCGCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      <  2:518519/276‑1 (MQ=255)
                                                                                                                                                           aTGGAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGGGCACCGCAAACACCACCAGCATGCCGTACTGGTCCCAGAGACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCAGACTCTCCTTACTCAGGCGACGGCCTGGCTGACTTTGGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      <  2:2048304/289‑1 (MQ=255)
                                                                                                                                                           aTGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGACTGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTACCAATTCACCGGCGATTTCACCTTCCAGCATCACCACAATCCGCTCGGCAACGCCGAg                                                                                                                      >  2:340171/1‑289 (MQ=255)
                                                                                                                                                           aTGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCAt                                                                                                                                                 <  1:735826/262‑1 (MQ=255)
                                                                                                                                                           aTGAAAGTGAAAAAAGTTGAGAAAAAAATGGCACAGGAGAAAAAGAGCACCGCAAACACCACCAGCATGCCGGACTGATCCCAGATACGCCCGAGGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      <  2:2133470/289‑1 (MQ=255)
                                                                                                                                                               aGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACt                                                                                                                  <  2:1701060/289‑1 (MQ=255)
                                                                                                                                                                ggTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAACCAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGTCAACGCCGAGGACt                                                                                                                  >  1:1393083/1‑288 (MQ=255)
                                                                                                                                                                ggTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACt                                                                                                                  >  1:2107197/1‑288 (MQ=255)
                                                                                                                                                                ggTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACt                                                                                                                  >  2:1055444/1‑288 (MQ=255)
                                                                                                                                                                   ggCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTaa                                                                                                                                                                               <  1:569768/224‑1 (MQ=255)
                                                                                                                                                                    gCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAca                                                                                                                                                                                                                                                                      <  2:945707/136‑1 (MQ=255)
                                                                                                                                                                     cAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACtt                                                                                                                 >  2:483492/1‑284 (MQ=255)
                                                                                                                                                                            tGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGc                                                                                                     <  1:566011/289‑1 (MQ=255)
                                                                                                                                                                                      aTGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCaaa                                                                                           <  1:46160/289‑1 (MQ=255)
                                                                                                                                                                                               gCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCg                                                                                                                        >  2:579556/1‑251 (MQ=255)
                                                                                                                                                                                                 gATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGcc                                                                                 <  1:1844716/288‑1 (MQ=255)
                                                                                                                                                                                                         gCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgc                                                                        >  1:254008/1‑289 (MQ=255)
                                                                                                                                                                                                         gCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgc                                                                        >  1:533490/1‑289 (MQ=255)
                                                                                                                                                                                                          cACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgc                                                                        >  1:133555/1‑288 (MQ=255)
                                                                                                                                                                                                             cGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCCCATCTGCCTGCTCGTGTAACAATTCACCGGCGCTTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAACCAGCACCCCCACGCCCCGcgcc                                                                     >  2:1171956/1‑288 (MQ=255)
                                                                                                                                                                                                               cAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      <  1:49996/237‑1 (MQ=255)
                                                                                                                                                                                                               cAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      >  2:49996/1‑237 (MQ=255)
                                                                                                                                                                                                                    accaccAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAgcgc                                                             >  1:104056/1‑289 (MQ=255)
                                                                                                                                                                                                                       accaGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGAc                                                                                                                                                                                                     <  1:1001065/150‑1 (MQ=255)
                                                                                                                                                                                                                       accaGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATa                                                          >  1:1733235/1‑289 (MQ=255)
                                                                                                                                                                                                                       accaGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGAGCATa                                                          >  1:2120853/1‑289 (MQ=255)
                                                                                                                                                                                                                            cATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTa                                                     <  2:1733235/289‑1 (MQ=255)
                                                                                                                                                                                                                             aTGCCGTACTGATCCCGGATCCGCCCGAAGCGGAATGACGCCTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGAATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAAtt                                                      <  2:858011/287‑1 (MQ=255)
                                                                                                                                                                                                                              tGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAGTCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACg                                                   >  1:1497570/1‑289 (MQ=255)
                                                                                                                                                                                                                               gCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGt                                                  <  1:386478/289‑1 (MQ=255)
                                                                                                                                                                                                                                ccGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGtt                                                 >  1:2036823/1‑289 (MQ=255)
                                                                                                                                                                                                                                   tACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTACCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtata                                              >  2:221611/1‑289 (MQ=255)
                                                                                                                                                                                                                                    aCTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtctat                                             >  1:1443351/1‑289 (MQ=255)
                                                                                                                                                                                                                                    aCTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtatat                                             <  1:357725/289‑1 (MQ=255)
                                                                                                                                                                                                                                    aCTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtatat                                             >  1:858011/1‑289 (MQ=255)
                                                                                                                                                                                                                                          cccAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCg                                       >  1:963394/1‑289 (MQ=255)
                                                                                                                                                                                                                                          cccAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCg                                       >  2:1939697/1‑289 (MQ=255)
                                                                                                                                                                                                                                           ccAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                                                                                                                                                                                      >  2:1130043/1‑97 (MQ=255)
                                                                                                                                                                                                                                           ccAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                                                                                                                                                                                      <  1:1130043/97‑1 (MQ=255)
                                                                                                                                                                                                                                             aGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCa                                                                                                                                                  <  2:68082/179‑1 (MQ=255)
                                                                                                                                                                                                                                             aGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtat                                               >  2:353687/1‑278 (MQ=255)
                                                                                                                                                                                                                                                   gCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACCGCACCGCCACGCCCTGCGCCGCCAGAGCAACAATTACGTTATATATTTCGTGCTTAgc                               >  2:1664732/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   gCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAgcg                              <  2:1432294/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 gacgactTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGcc                <  2:254008/284‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgactTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                      <  1:115388/182‑1 (MQ=255)
                                                                                                                                                                                                                                                                   cgactTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCcg               >  2:2178031/4‑288 (MQ=255)
                                                                                                                                                                                                                                                                            tGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGt      <  1:742392/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                ccAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCAt  >  2:645309/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                     
TTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCAT  >  CP042583/1647274‑1647833

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A