Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,647,554 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,647,5540GC99.1% 501.8 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (114/103);  total (115/104)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,647,5550CG98.6% 504.4 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (113/102);  minor base A (1/2);  total (115/104)
Fisher's exact test for biased strand distribution p-value = 6.07e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,647,5560TA98.6% 501.3 / NA 219intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (115/101);  minor base G (0/3);  total (115/104)
Fisher's exact test for biased strand distribution p-value = 1.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 219 total aligned reads displayed.

TTTCAGTCAGGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCATC  >  CP042583/1647274‑1647834
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
tttCAGTCAGGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGa                                                                                                                                                                                                                                                                                  <  1:1235051/289‑1 (MQ=255)
  tcagtcagGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaa                                                                                                                                                                                                                                                                                 >  1:1435928/1‑288 (MQ=255)
  tcagtacgGGTAATAAACACCGCCTGGGTGAC‑ACCCGAACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaaa                                                                                                                                                                                                                                                                                <  2:1948771/289‑1 (MQ=255)
  tcagtaagGTTAATAACCACCGCCGTGGTGCA‑ACCCGAACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaaa                                                                                                                                                                                                                                                                                <  2:1763593/289‑1 (MQ=255)
       cagGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAGCAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                                                                                                                                                                                            <  1:711329/288‑1 (MQ=255)
        agGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaag                                                                                                                                                                                                                                                                          >  1:281099/1‑289 (MQ=255)
        agGTTAAAAACACCGGCCGTGGTGAC‑ACCCGCAAAGGCAATTACGGAGGCGAAAGAAAGGGCAAAGTCAACGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaag                                                                                                                                                                                                                                                                          <  2:1554719/289‑1 (MQ=255)
          gTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAc                                                                                                                                                                                                                                                                        >  1:1857697/1‑289 (MQ=255)
          gTTAATAACCACCGCCGTAGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAc                                                                                                                                                                                                                                                                        >  1:722485/1‑289 (MQ=255)
                aaCCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                  <  1:764818/289‑1 (MQ=255)
                aaCCACCACCGT‑GTGACGACCACGACAAGCAATTACGGAGCACACAGAAAGGTCAAGGTCGCCGGAAGCGAGGCAGACAAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAACTGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                  <  2:1073895/289‑1 (MQ=255)
                aaCCAACGCCGTGGTGAG‑CCCAGCACAGGCAAGTAAGGAAGCGACCGAAAGGTAGAAGTCACCGGAAGCGAGGCAGAACAACATGCAACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                  <  2:421343/289‑1 (MQ=255)
                    accGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                                                                                                                                                                                               >  1:1686970/1‑288 (MQ=255)
                    accGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAACCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTACTGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGACCGACGACTTAGGTGCGCCAGACCCCGATGTAGAACCACAAGACACCATAct                                                                                                                                                                                                                                                                >  2:1439097/1‑287 (MQ=255)
                      cgccgTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTcc                                                                                                                                                                                                                                                            <  1:1198577/289‑1 (MQ=255)
                            ggggAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTc                                                                                                                                                                                                                                                      <  1:1004228/286‑1 (MQ=255)
                              tgAA‑ACCAGGACAAGAAATTACGGAGGTGCCAGCAAGGCCGAAGTCACCGGAAGAGAGGCAGAACCACCTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTATCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCGAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACGTCATACTCTCCTTACTCa                                                                                                                                                                                                                                                     <  2:644110/288‑1 (MQ=255)
                                 c‑acCCGCAAAGGCAATTACGTAGGCGACAGAAAAGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCa                                                                                                                                                                                                                                                 <  2:1708830/289‑1 (MQ=255)
                                    cacggacaGGAAACTACGGAGGCAACAGAAAGGTCCAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCa                                                                                                                                                                                                                                                 <  2:1850924/282‑1 (MQ=255)
                                                aTTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTg                                                                                                                                                                                                                                     >  2:682719/1‑287 (MQ=255)
                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGCACAACATGCCACAAGCCACCATCCCCGACATGGAAACTGCCAGTCCCAACCCTTTCATATTAATGAAGGTGGCAACATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCCAAGCTGAATGACGACTCTGGCGCGCCAGACCCCGATGTAGAACCCGAAGACCCCATACTCCCCTTACTCAGGCAACAGCCTGGCGTACTTTAgg                                                                                                                                                                                                                             >  2:1056596/1‑288 (MQ=255)
                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACACCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGc                                                                                                                                                                                                                            >  2:1248090/1‑289 (MQ=255)
                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAAAACCATGCCACAAGCCACCAACCCCGACATGGAAATTGCAAGGCCCAACCCTTTCATATTAAGGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCAGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAgg                                                                                                                                                                                                                             <  1:46278/288‑1 (MQ=255)
                                                                 aaGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCaa                                                                                                                                                                                                                     <  1:254050/286‑1 (MQ=255)
                                                                 aaGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCa                                                                                                                                                                                                                      <  1:1156921/285‑1 (MQ=255)
                                                                  aGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCt                                                                                                                                                                                                                 <  1:682719/289‑1 (MQ=255)
                                                                   ggTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTc                                                                                                                                                                                                                <  2:164728/289‑1 (MQ=255)
                                                                       aaaGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                  <  2:1608576/235‑1 (MQ=255)
                                                                       aaaGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                                                                                                                                                                                  >  1:1608576/1‑235 (MQ=255)
                                                                         aGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACAGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGc                                                                                                                                                                                                           >  1:809167/1‑288 (MQ=255)
                                                                             aCCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGAc                                                                                                                                                                                                      <  1:1259035/289‑1 (MQ=255)
                                                                              ccGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCGCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCCCAGTGccggcc                                                                                                                                                                                                      >  2:810116/1‑284 (MQ=255)
                                                                               cGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGc                                                                                                                                                                                                    <  1:15277/289‑1 (MQ=255)
                                                                                          cAGAACAACATGCCACAAGGCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctgcct                                                                                                                                                                                          <  1:891708/288‑1 (MQ=255)
                                                                                                   aTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTaa                                                                                                                                                                                <  1:570230/289‑1 (MQ=255)
                                                                                                       cacaAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCCCCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCAAACTCTCCTTACTCAGGCAACAGCCTGGCTTACTTTAGTCATCGCACGGCTCAGAGCCGGACGCGTATATGCCTTCTGGTGGAACAAt                                                                                                                                                                            >  2:1028109/1‑289 (MQ=255)
                                                                                                       cacaAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTTCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCCCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACTCTCAACTGCCTGCTCCTGGAACAAt                                                                                                                                                                            >  2:680292/1‑289 (MQ=255)
                                                                                                          aaGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCCCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTc                                                                                                                                                                          >  1:1942998/1‑288 (MQ=255)
                                                                                                            gCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCAcc                                                                                                                                                                       >  1:868098/1‑289 (MQ=255)
                                                                                                                       cgacATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCCTCTGCCTGCTCGGGTAACAAATACCCGGCGATTTcc                                                                                                                                                             >  2:1299404/4‑287 (MQ=255)
                                                                                                                         acATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctgcct                                                                                                                                                                                          <  1:612652/256‑1 (MQ=255)
                                                                                                                            tGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTcc                                                                                                                                                       <  1:483028/289‑1 (MQ=255)
                                                                                                                              gAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCCTCGCCAGGCTCAGTGCCTGACGCTCCTCTTCCCGCTCGTGTAACCATTCACCGGCGATTTCACCTTccc                                                                                                                                                      >  2:1478065/1‑288 (MQ=255)
                                                                                                                                aaTTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCa                                                                                                                                                   <  1:1769885/289‑1 (MQ=255)
                                                                                                                                         gCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACaa                                                                                                                                          >  2:1407881/1‑289 (MQ=255)
                                                                                                                                          cccAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACaa                                                                                                                                          >  1:1653320/1‑288 (MQ=255)
                                                                                                                                                   ttCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCTGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACCATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCgg                                                                                                                                 >  2:233730/1‑288 (MQ=255)
                                                                                                                                                    ggatatTAATGAAGGTGGCAAAACTGGGGACCAAAATGGCACAGGCGATAAA‑GAGCACAGCAACAACCACAAGCAAGCCGTACTGATCCAAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTGTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCa                                                                                                                               <  2:1923938/287‑1 (MQ=255)
                                                                                                                                                     cATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCa                                                                                                                               >  1:1588667/1‑288 (MQ=255)
                                                                                                                                                         ttAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGcc                                                                                                                          >  1:1933309/1‑289 (MQ=255)
                                                                                                                                                         ttAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGc                                                                                                                           >  2:267399/1‑288 (MQ=255)
                                                                                                                                                          tAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                                                                                                                                                                                       >  2:1129311/1‑179 (MQ=255)
                                                                                                                                                          tAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCCCATCACCCCAATCAGGTCGGCaccccc                                                                                                                          >  2:569922/1‑283 (MQ=255)
                                                                                                                                                            aTGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                       <  1:691572/289‑1 (MQ=255)
                                                                                                                                                            aTGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAg                                                                                                                       <  1:451273/289‑1 (MQ=255)
                                                                                                                                                                aGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGAc                                                                                                                    <  1:1615199/288‑1 (MQ=255)
                                                                                                                                                                  gTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAcatc                                                                                                                                                                                                                                                                     >  1:1438100/1‑141 (MQ=255)
                                                                                                                                                                  gTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACTCCGAGGACtt                                                                                                                  >  2:1448176/1‑288 (MQ=255)
                                                                                                                                                                   tGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATca                                                                                                                                                >  2:1437490/1‑257 (MQ=255)
                                                                                                                                                                   tGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCa                                                                                                                >  1:784521/1‑289 (MQ=255)
                                                                                                                                                                     gCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAgg                                                                                                              >  2:581209/1‑289 (MQ=255)
                                                                                                                                                                      cAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCG‑ATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATGTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGTACTTCACGTa                                                                                                            >  1:1079519/1‑289 (MQ=255)
                                                                                                                                                                      cAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAgg                                                                                                              <  2:374818/288‑1 (MQ=255)
                                                                                                                                                                       aaaaTTTGGGACAAAAAAGGCACAGGCGATAGA‑GAGCACCTCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGCAGCTGAATGACGACTTAGGTGCGCCAGACCCCAATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGt                                                                                                             <  2:938902/288‑1 (MQ=255)
                                                                                                                                                                                gACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTg                                                                                                    <  2:720362/288‑1 (MQ=255)
                                                                                                                                                                                 aCAAAAATGCAACAGCAGATAAC‑GCGCACCACAAACACCACCAGCATGCCGTACTGATCCACGATACGCCCGAAGCTGAATGACGACTTAGGGGCGCCAGACCCCGAGGTAGAAACAGAGGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGAATTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGAGTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTgg                                                                                                   <  2:771331/288‑1 (MQ=255)
                                                                                                                                                                                          gCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACa                                                                                          >  1:336220/1‑288 (MQ=255)
                                                                                                                                                                                           aaccagCGATAAAGGAGCA‑CACAATCCCCACCGACATGCCGTACTGGACCCGGATACGCCCGAAGCTGAACAACGAATTAGGTTGCACAGACCCCGATCTAGAAACAGAAGACACAATACTCGCCTTACTCAGGCACCAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCGGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAg                                                                                         <  2:1284920/283‑1 (MQ=255)
                                                                                                                                                                                            tcagtagATAGA‑GAGCACCGCAAACACCACCCGAATGCCCGACTGATCCCCGATACGCCAGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTGACTCAGGCAACAGCCGGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCa                                                                                       <  2:1307454/283‑1 (MQ=255)
                                                                                                                                                                                                gCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAACCAGCACCg                                                                                    >  2:965110/1‑288 (MQ=255)
                                                                                                                                                                                                           gCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATCCGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTTCTTACTCAGGACACAGCCCGGCTGACTTTAGGCATCGCAAGCCTCAGTGCCGGACGCTCATCTGCCTGCTCGTGCAACAATTCACCTGCGATTCCACCTTTCCGCATCACCACAATCCGGTCCGTAACCCCTCGGACTTCAGGCAAGTCGCTGGCGGCACACAGCCCCGCACCGCCCTg                                                                          >  2:1232661/1‑288 (MQ=255)
                                                                                                                                                                                                           gCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTg                                                                          >  1:1763970/1‑288 (MQ=255)
                                                                                                                                                                                                            cACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTgc                                                                         >  1:957070/1‑288 (MQ=255)
                                                                                                                                                                                                               cGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGCCTTCAGGTAAGTCGCTGGAGGCAAACAGCCCCGCCCCGCCCTGcgcc                                                                      >  2:1784724/1‑288 (MQ=255)
                                                                                                                                                                                                                  aaaCACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCa                                                                  <  1:1827679/289‑1 (MQ=255)
                                                                                                                                                                                                                      accaccAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAgcgc                                                              <  1:178667/289‑1 (MQ=255)
                                                                                                                                                                                                                         accaGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCa                                                                                              >  1:588231/1‑254 (MQ=255)
                                                                                                                                                                                                                                tGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACg                                                    <  2:957070/289‑1 (MQ=255)
                                                                                                                                                                                                                                tGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACg                                                    >  1:1731042/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ccGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGtt                                                  >  2:1662623/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTtata                                               >  1:425549/1‑289 (MQ=255)
                                                                                                                                                                                                                                            cccAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGCAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCCTCAATTACGCTATATATTTCg                                        >  2:1195647/1‑289 (MQ=255)
                                                                                                                                                                                                                                               aGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGTCAGCGCATAAATTACGTTATATATTTCGt                                       >  1:1485516/1‑287 (MQ=255)
                                                                                                                                                                                                                                                  gaCGCCCGAAGCTGAATGACGACTTAGGTGTGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGATGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCt                                    <  1:1056596/286‑1 (MQ=255)
                                                                                                                                                                                                                                                    cGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCGCCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGCCTTCAGGTAAGTCGCTGGAGGCAAACAGCAACGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAgc                                >  1:901487/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    cGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGcc                                                                                  >  1:1442418/1‑239 (MQ=255)
                                                                                                                                                                                                                                                    cGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAgc                                >  2:848868/1‑289 (MQ=255)
                                                                                                                                                                                                                                                    cGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCCCCGCCAGCCCATAAATTACGTTATATCTTTCGTGCTTAg                                 >  2:1835964/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     gCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATACATTACGTTATATATTTCGTGCTTAgc                                >  1:984930/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 atgccgactaaGGTGCCCCAGCCCCGAGACTGGAAACATAAGACATCTTACTTCCCTTACTCAGGCAACAGCCTGGCTGACTGTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATg                   <  2:49907/279‑1 (MQ=255)
                                                                                                                                                                                                                                                                 atgacgactTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACg                                                    >  1:1142534/8‑256 (MQ=255)
                                                                                                                                                                                                                                                                  tgtcgactTAGATGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGc                  <  1:1381794/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tgacgactTGGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGc                  <  2:1933309/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tgacgactTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGc                  <  1:1088229/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                        ctTAGGTGCGCCAACCCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCcgcgcg            <  1:1290223/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                cgcCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCa    >  2:1057986/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                  ccAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACg                                                                                                                            >  1:1303297/1‑167 (MQ=255)
                                                                                                                                                                                                                                                                                  ccAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAAtt                                                       <  2:1576945/236‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  ccAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCAGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGc                  >  2:1899516/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                                  ccAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCAGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGc                  <  1:1899516/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                      
TTTCAGTCAGGTTAATAACCACCGCCGTGGTGAC‑ACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAA‑GAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGCGATTTCACCTTCCCGCATCACCACAATCCGGTCGGCAACGCCGAGGACTTCAGGTAAGTCGCTGGAGGCAAACAGCACCGCCACGCCCTGCGCCGCCAGCGCATAAATTACGTTATATATTTCGTGCTTAGCGCCAACATCAATGCCGCGCGTAGGTTCATC  >  CP042583/1647274‑1647834

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A