Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,525,024 |
3 bp→TCA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,525,024 | 0 | A | T | 99.1%
| 507.6
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (77/137); minor base C (2/0); total (80/137) |
| Fisher's exact test for biased strand distribution p-value = 1.33e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,525,025 | 0 | G | C | 99.1%
| 489.8
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/0); major base C (77/136); minor base T (2/0); total (80/137) |
| Fisher's exact test for biased strand distribution p-value = 1.34e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.91e-01 |
| * | CP042583 | 1,525,026 | 0 | T | A | 98.1%
| 487.5
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (3/0); major base A (73/136); minor base C (4/0); total (80/137) |
| Fisher's exact test for biased strand distribution p-value = 1.62e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01 |
Only 100 of 217 total aligned reads displayed.
CAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTAGTTTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGAGTGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCG > CP042583/1524744‑1525301
|||
cAAAATCCTCGGC‑TTGAACATACCTTCAGAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGAGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGGAA‑GGGCCTTTCATTTggcg < 1:1805687/289‑1 (MQ=255)
aaaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTggcg < 1:1180339/289‑1 (MQ=255)
aagtCCACGGCTTTGAAAAAACCTTCAAAAATGCCCTGACTACTCTGACGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTggcgg < 2:1385009/286‑1 (MQ=255)
aaTTCCTCGGCTTTGAACAAACCGTCCAAAATGCCCTGACTACGCTGCCGATGGGCGGTGGTAAAGGGGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTAATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTggcgg < 2:1148609/289‑1 (MQ=255)
aaTTCCTCGGCTTTGAAAAAACCTTCAAAAATGCCCGGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTggcgg < 2:32544/289‑1 (MQ=255)
aaTTCCCCGGCTTTGAACAAAACTTCAAAAAGGCCCTGACTAATCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTggcgg < 2:257908/289‑1 (MQ=255)
cTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCt < 1:1708217/289‑1 (MQ=255)
cAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGTGGAGGAAAAAGGTCGCCCACAATACCGCCTGCGTCTCTCA‑CGGCAC‑GGGCCCTTCATTTGGCGGCCGTCTTATTCGCCCGGAAGCTAc > 2:1076511/1‑288 (MQ=255)
aTGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 1:1027026/289‑1 (MQ=255)
aTGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 1:189832/289‑1 (MQ=255)
aTGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa < 1:1240895/289‑1 (MQ=255)
tGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGAAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGGGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCAAACAATACAGCCTGCGTCT‑TCAACGGTAA‑GGGCATTTCATTTGGCGGCAGGCTTATTCGCACGGAAGATAACGGCTaa > 1:1796072/1‑288 (MQ=255)
cccgaatagtctGCCGAGTGGCGGTGGTAAAGGGTGCAGCGATTTCGTTCCGAAAGGAAAAATCGAAGGGGAAGTGAGTCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGACACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCTGCTTTATGGCGGGGATGATGAAAAAGCGCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCTGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGt < 2:1713358/280‑1 (MQ=255)
cTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTc < 1:667663/289‑1 (MQ=255)
ctGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGGTTAtt > 1:1146293/1‑289 (MQ=255)
ggctgATGGGGGGGGGTAAAGGCGGCGGCGATTTAGTTCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGAGGACTGAACTGTATCGCCACCGGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTAttt < 2:451916/285‑1 (MQ=255)
ccGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTc < 1:611432/277‑1 (MQ=255)
cGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGTGGGGATGGTGAAAATGCTCTCCCACAATACCCCCTGCGTCC‑TCACCGGGAA‑GGGCCTTTCCTTTGGCGAGCGTCCTATTCGCCCGGACGCGACCGCGCCCGGTCGGGGTTAtttgcc > 2:655330/1‑286 (MQ=255)
cGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTcac > 1:1834508/1‑289 (MQ=255)
cGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACAGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGAGGATGCAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTTA‑GGGCCGTTCATTTTGCGGCAGGCCTTTTCCCCCGGATGCAGCCGGCTACGGGCTTGGTTATGTcaa > 2:740623/1‑288 (MQ=255)
aTGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGAGGAAAAAGTGCTCCAACAATACCGCCTGCGGCT‑TCACCGGTAAGGGGCTTTCCTTTTGGC‑GCCGTCTTATTCGCCCGGAAGCTACCCGCTACGGTCTGGGTTATTTCCCAg > 2:808261/1‑289 (MQ=255)
gggCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCCTTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTCCATTTGGCCGCAGTCTTATTCGCCCGGACGCTACCGGGTACGGTCTGGGTTATTTTACAGaa > 2:1045117/1‑289 (MQ=255)
ggCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGGCTGGTTTATTTCACAGAAg > 1:1242052/1‑289 (MQ=255)
gCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAg < 2:1738663/288‑1 (MQ=255)
gtggtAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTTA‑GGGCCTTTCATTTGGCGGCCGTCTTATTCGCCCGGAAGCTACCGGGCACGGGCTGGTTTATTTccctagaggaat > 1:990359/1‑278 (MQ=255)
gtggtAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGAGGGAAAAGCCCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑AGGCCTTTCATTTGGCGGCAGTCTTATTTCCCCGGAAGCTACCGGCCACGGGCGGGTTTAttttctaggaggcaa > 2:30202/1‑277 (MQ=255)
ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGTTCTCCAACAATACCGCCTGCGTCT‑TCACCGGGAA‑GGGCCTTTCATTTTGCGGCAGTCTTATTCGCCCGGAAGCCACCGGCTACGGTCTGGGTTATTTCACAGAAGCAATGCTAAAAAGc > 2:1450098/1‑288 (MQ=255)
ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc < 1:283514/289‑1 (MQ=255)
ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGc < 2:559330/288‑1 (MQ=255)
ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGAAGATGAAAAAGCTCTCCAACAATACCGCCTGCGGCT‑TCACCGGTAA‑GGGCCTTTCATTTTGCGGGAGTCTTATTCGCCCGGAAGGTACCGGCTACTGTCTGGTTTATTTCCCAGAAACAATGCTAAAACGc > 1:718430/1‑288 (MQ=255)
gcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc < 2:1136070/288‑1 (MQ=255)
cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGTCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa < 1:1116359/288‑1 (MQ=255)
tttCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTAt < 1:1670984/288‑1 (MQ=255)
tttCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTAt < 1:1434744/288‑1 (MQ=255)
tttAGATTCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCGCCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTAt < 2:1852685/288‑1 (MQ=255)
gAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGaa < 1:1864874/289‑1 (MQ=255)
aaaGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAg > 1:1563752/1‑289 (MQ=255)
aaaGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGACGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAg > 1:1051022/1‑289 (MQ=255)
aaGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGcgttt < 1:1450098/288‑1 (MQ=255)
gTTTTTGCCAGGCGCTGATGACTGAGCTGTATCGCAACCTGGGAGCGGATACCGGCGTTACGGCAGGTGATATCGGGGTTGGTGGTCGGGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCgg < 2:1011805/289‑1 (MQ=255)
ttGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAAc > 1:754439/1‑289 (MQ=255)
tggcAGGGGGTGATGACTGAAGTGTGTCGCCACCGGGGGGCGGGTAGAGACGTGCGGGCAGGTGATAACGGGGGTGGTGGTCGTGAAGGCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGGAGTCTTATTCGCCCGGAAGCTACGGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACg < 2:1874366/286‑1 (MQ=255)
tGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACg < 1:651037/289‑1 (MQ=255)
gcgttgtggaCTGAACTGTATCGCCACCTGGGCGCGGGTACCGCCGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGcc < 2:1770214/280‑1 (MQ=255)
gcgcTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGGTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGcc > 1:435594/1‑288 (MQ=255)
cgcTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGcc < 1:1345386/287‑1 (MQ=255)
cgcTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGGCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGcc < 1:438286/287‑1 (MQ=255)
cTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGt > 1:898676/1‑289 (MQ=255)
gaggactgacggtgaTCGCCCGCGGGGGGCTGATAACGACGTTGCGGCAGGGGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑Ac < 2:477573/275‑1 (MQ=255)
tGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGGAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGGCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCCCCGGCAACGTCGCCCAGT‑ACGCTATCCaaaa > 1:1521384/1‑289 (MQ=255)
tATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTTGCGGCAGGCTTATTCGCCCGGAAGCTACCGGCTACGGGCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGaaaaaa > 1:1754847/1‑288 (MQ=255)
aTCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGGAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCCCCGGCCACGTCGCCCAGG‑AAGGTAACGAACAAga > 1:922350/1‑288 (MQ=255)
tCGCCACCTGGGCGGGGATACCTACCTTCCTGCAGGTTAGTTCGGGGTTTGTGGTCGTGAGGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCTCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCg < 2:1796072/289‑1 (MQ=255)
tCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGATGAAAAAGATCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTTCGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGGTTTGAAGGGGGGCGCGTTTCCGTTTC‑TGGCTCCGGCAACCTCTCCCCGT‑ACGCGTGCGAAAAAgtg > 2:75278/1‑287 (MQ=255)
cGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTc < 1:638289/264‑1 (MQ=255)
ccACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TTGCTCCGGCAACGTCGCCCAGT‑ACGCTAACGAAAAAGCGATg > 1:858253/1‑289 (MQ=255)
tGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCCACAATACCGCCTTCGTCT‑TCCCCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGGTGCGCGTTTCCGTTTC‑TGGCTCCCGCAACGTTCCCCAGG‑ACGCTAACGAAAAAGCGATGGaaat > 2:388062/1‑287 (MQ=255)
tGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAAtt < 1:243479/289‑1 (MQ=255)
tGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGGCCCCCAGT‑ACGCTATCGAAAAAGCGACGGAAtt > 1:568087/1‑289 (MQ=255)
gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTg < 1:1374891/289‑1 (MQ=255)
gagggtACCGACGTTCCGGCAGGTGATAGCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATTAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTg < 1:94764/284‑1 (MQ=255)
gATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCt < 1:1611769/288‑1 (MQ=255)
gATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGGTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGGCGCCCAGT‑ACGCTCTCGAAAAAGCGATGGAATTTGGTGCTc > 1:815647/1‑289 (MQ=255)
gATACCGACGTTCCGGCAGGTGATATCGGGGTGGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCt < 2:1834508/288‑1 (MQ=255)
aaTACCGACGGTCGGGGTGTGGGTATGGGGGTTGTTGGTCGTGAAGTCGTCTTTGTGGCGGAGCTAATGAAATAGCTCACCAACAATCCCGCCCTCGTCT‑TCCCCGGTAA‑GGGCCTTTCATTTGGTGGCAGTCTTATTCGCCCGGAAGCTACCGGATACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCt < 2:551749/287‑1 (MQ=255)
cGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCCACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTTGCTGCAGTCTTATTCTCCCGGAAGCTACCGGCTACCGTCCGGGTTTTTTCACAGAAGCAATGCTTAAAAGCCACGGCTGTGGTTTTTAAGGGATTGCCGTTTCCGTTTCTTGTCCCCGGC‑ACCTCCCCCACG‑ACGCTTTCCAAAAACCGCTTGAATTTGGTGTCCGtgtg > 2:1489638/1‑289 (MQ=255)
cGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGAt < 1:256138/288‑1 (MQ=255)
cGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGAt < 2:898676/288‑1 (MQ=255)
gTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGGAAAAGCGATGGAATTTGGTTCTCGTGTGATc > 1:1558713/1‑288 (MQ=255)
tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACt < 1:423100/289‑1 (MQ=255)
tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACt > 1:464050/1‑289 (MQ=255)
cAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGAGCTCGTGTGATCACTGCgt < 1:1302244/288‑2 (MQ=255)
gATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCgtcagag < 1:1533965/288‑7 (MQ=255)
gATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGGAGGGATGCGCGTTTCCGGTTC‑TTGCTCCGGCCACGTCGCCCCGT‑ACGCGAACGAAAAAGGGCTGGAATTTGGGGCCCGGTTGATTACTggggcagac > 2:862250/1‑280 (MQ=255)
tCGGGGTTGGGTGTCGTGAAGTCGGCTTTAGGCGGGGGAGGATGAAAAAGCTCTCCACCAATACCGCCTGCGTCT‑TCACCGGTAA‑GGTCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAg < 2:815647/289‑1 (MQ=255)
ggggTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCg < 1:1015770/289‑1 (MQ=255)
gggTCGGGGGTCATGAAGTCGGTGTTGAGGCGGGGATGAGGACCAGCCTCTCCACCATTACCGCCTGCGTCT‑TCAGCGGTAA‑GGGCCTTTAATTTGGCGGCAGTCTTATTCGCCCGGAAGCTCCCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGAGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCg < 2:1161488/288‑1 (MQ=255)
ggtgggtgGGCGTGAAGGCGGCGTTATGGTGGGGAAGATGAACAAGCTCTCCGACAATTCCGCGTGCGTCT‑TCGCCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCGACCGGCTACGGTCTGGTTTAGTTCGCAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAGTTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCgg < 2:311842/288‑1 (MQ=255)
ggTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCgg < 1:30202/288‑1 (MQ=255)
tggtggTCGGGAAGTCTGCTTTATGGCGGGGAGGATGAAAAAGCTTTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTAGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCAc < 2:1679702/288‑1 (MQ=255)
tggtggTCGGAAAGTGGGCTGTATGGCGGGGATGATGAAAAAGCTCTCCAACAATCCCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCAc < 2:418212/288‑1 (MQ=255)
ggtggtCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCCGACTCCAGCGGCAcgg > 1:1638131/1‑287 (MQ=255)
gggggtgatgaaGAAAAAACCCTCCAAACCGAACGCCTGGGGTT‑TCACCGGTAA‑TGGGCTGTCATGTGGCGGCGATCTTATTCGCCCGGAAGACAACTGGTTGGGTTCGGTTTAATTCACCGAGAGAATGGTAAAACGCCACCGGTTGGGTTTTGAAGGGATGCGCGTTTCCGTTTT‑TTGCTCCGGGAAAGTTGGCCAATAACCCTA‑AGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACg < 2:1257502/283‑1 (MQ=255)
gggATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTg < 1:1080812/226‑1 (MQ=255)
gggATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGaaa < 1:157256/288‑1 (MQ=255)
gggATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCCACGGTCTGGGTTATTTCACAGAAGCAATGCTAAAACGCCACGGGATGGGTTTTGAAGGGATGCGCGTTTTCGGTTC‑TGGCCCCGGCCACGGCGCCCCGT‑ACGCTATTGAAAAAGCGATTGAATTTGGTGCCCCTGTGGTCACTGCGTGCGACTCCAGCGGCGCATTGGTTTCTGAAAGTGGTGTCACAAAag > 2:1308708/1‑289 (MQ=255)
ggATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAag < 1:806524/288‑1 (MQ=255)
tgatgaAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCTGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGaa < 2:134709/289‑1 (MQ=255)
aaaaGCCTTCCAACAATGCCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGc < 2:1626142/289‑1 (MQ=255)
ctcCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCtt > 1:340596/1‑289 (MQ=255)
caacaaTACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATc < 1:1174866/289‑1 (MQ=255)
ccGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCgtca > 1:1202188/1‑215 (MQ=255)
ccGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCgtca < 2:1202188/218‑4 (MQ=255)
gCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCaaa > 1:1396158/1‑288 (MQ=255)
gCCTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCaaa > 2:61480/1‑288 (MQ=255)
ccTGCGTCT‑TCACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAag > 2:1583744/1‑288 (MQ=255)
cT‑TCACCGGTAA‑GTGCCTTTCGTTTGGCGGCATTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGAGCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCcg < 1:1268712/288‑1 (MQ=255)
cACCGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAg > 1:628192/1‑213 (MQ=255)
cGGTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGt < 2:1563752/289‑1 (MQ=255)
gTAA‑GGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCg > 1:744028/1‑289 (MQ=255)
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CAAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTCCAACAATACCGCCTGCGTCT‑TCACCGGTAA‑GGGCCTTAGTTTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGCGCGTTTCCGTTTC‑TGGCTCCGGCAACGTCGCCCAGT‑ACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGAGTGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCG > CP042583/1524744‑1525301
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
