Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,525,024 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,525,0240AT99.6% 658.3 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (113/162);  total (114/163)
Fisher's exact test for biased strand distribution p-value = 4.13e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,525,0250GC98.5% 635.3 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  major base C (107/162);  minor base T (4/0);  total (114/163)
Fisher's exact test for biased strand distribution p-value = 2.65e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,525,0260TA98.2% 629.0 / NA 277intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (3/0);  major base A (105/163);  minor base C (5/0);  total (114/163)
Fisher's exact test for biased strand distribution p-value = 1.00e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.86e-01

Only 100 of 277 total aligned reads displayed.

AAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTAGTTTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGAGTGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAG  >  CP042583/1524745‑1525303
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
 acgtCCTCGGCGTTGAACAGACCTTCAAAAATGCCCTGACGACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTggcgg                                                                                                                                                                                                                                                                                <  2:488765/286‑1 (MQ=255)
 aaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTggcgg                                                                                                                                                                                                                                                                                <  1:2959688/289‑1 (MQ=255)
 aaTTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTggcgg                                                                                                                                                                                                                                                                                <  1:1021563/289‑1 (MQ=255)
        cGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGAAGTGTAAAAAGCTCTC‑CAAACATACCGCCTGCGTCTTCCCC‑GGCAACGGCCGTTTCATTTGCGGCAGTcct                                                                                                                                                                                                                                                                         >  2:2599337/1‑287 (MQ=255)
           ctttagaCAAACCTTCAAAAAGCCCCTAACTACTCTGCCGATGGGCGGGGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAGGGTGAAGCGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGGTTTATGGCGGGCATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTGGGCGGCAGTCTTAtt                                                                                                                                                                                                                                                                      <  2:1149534/283‑1 (MQ=255)
            cttGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTAtt                                                                                                                                                                                                                                                                      <  1:2557571/287‑1 (MQ=255)
                     aCCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGATGAAAAAGCGCTC‑CACCAATACCGCCTGCGTCTTCACC‑TGTAAGGGCCTTTTATTTTGCGGCAGTCTTATTCGCCCggga                                                                                                                                                                                                                                                             >  2:1099680/1‑286 (MQ=255)
                     aCCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAg                                                                                                                                                                                                                                                            <  1:3129340/289‑1 (MQ=255)
                     aCCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCCCTCACAAC‑ATACCGACCGCGTCTTTCAC‑GGGAAGGGCCTTTCCTTTGGCGGCAGGCTTTTTCCCCCgggaa                                                                                                                                                                                                                                                            >  2:3129340/1‑286 (MQ=255)
                       cTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCt                                                                                                                                                                                                                                                          <  1:1375997/289‑1 (MQ=255)
                               aTGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa                                                                                                                                                                                                                                                  <  1:2345505/289‑1 (MQ=255)
                               aTGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa                                                                                                                                                                                                                                                  <  1:3038250/289‑1 (MQ=255)
                                       actactCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCCC‑CAACAATACCGCCTGCGGCTTCACC‑GGGAATGGCCCTTCATTTGGCCGGAGTCCTTATCGCCCTGACACTCCCGGCTGCGGTcgtg                                                                                                                                                                                                                                          >  2:1375057/1‑286 (MQ=255)
                                                 cGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGGTGAGGAAAAAGCTCTC‑CAACAATACCGCCTGCCTCTTCACC‑GGTCAGGCCCTTTCATTTGGCGGCCGTCTTATTCGCCCGGGAGCCACCGGCTCCGGGCTCGTGTATGTctc                                                                                                                                                                                                                                >  2:2867970/1‑287 (MQ=255)
                                                  gATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTcaca                                                                                                                                                                                                                               <  1:2662954/289‑1 (MQ=255)
                                                   aTGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGGTTATTTCACAg                                                                                                                                                                                                                              >  1:2076866/1‑289 (MQ=255)
                                                       ggggtgggAAAGGGGGCAGGGATTGCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAg                                                                                                                                                                                                                           <  2:2057228/286‑1 (MQ=255)
                                                       gCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAg                                                                                                                                                                                                                           <  2:3066803/288‑1 (MQ=255)
                                                          gtggtAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCaa                                                                                                                                                                                                                        <  1:3113646/288‑1 (MQ=255)
                                                             gtAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGc                                                                                                                                                                                                                                                    <  1:2409722/257‑1 (MQ=255)
                                                                 aGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTaaaa                                                                                                                                                                                                                <  1:1746014/289‑1 (MQ=255)
                                                                     ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc                                                                                                                                                                                                            <  1:1545144/289‑1 (MQ=255)
                                                                     ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGc                                                                                                                                                                                                             <  2:1243019/288‑1 (MQ=255)
                                                                     ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGc                                                                                                                                                                                                             <  1:1099680/288‑1 (MQ=255)
                                                                     ggcAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGc                                                                                                                                                                                                             >  1:1243019/1‑288 (MQ=255)
                                                                     ggcAGCAATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc                                                                                                                                                                                                            <  1:2359054/289‑1 (MQ=255)
                                                                       cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAg                                                                                                                                                                                                                                                            <  2:2754916/239‑1 (MQ=255)
                                                                       cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa                                                                                                                                                                                                           <  1:1435970/288‑1 (MQ=255)
                                                                       cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa                                                                                                                                                                                                           <  1:2876422/288‑1 (MQ=255)
                                                                       cAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCa                                                                                                                                                                                                           <  1:449435/288‑1 (MQ=255)
                                                                             gttggATCCGAAAGGAAAAGGCGAAGGTGAAGGGTGGCGTTTTTGCCGGGCGCGGAGGGCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTAt                                                                                                                                                                                                     <  2:1659053/284‑1 (MQ=255)
                                                                                       aaaGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAg                                                                                                                                                                                          >  1:1308759/1‑289 (MQ=255)
                                                                                                      ggTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGAAGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTTCAAGAAGGAAAGGTAAAACGCCACGGGAAGGGGTTTGAAGGGATGC‑Gcgtttccg                                                                                                                                                                          >  1:754805/1‑289 (MQ=255)
                                                                                                           aGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCt                                                                                                                                                                     <  1:2593685/289‑1 (MQ=255)
                                                                                                            gTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGGTCTC‑CAACAATACCGCCTGCGGCTTCACC‑GGGAAGGGGCTTTCATTTTGCGGCAGTCCTATTCGCCCGGAAGCTACCGGCCACGGTCCGGTTTATTTCACAGGAGCAAAGCTCAAAAGCCCCGGCACGGGTTTTGAAGGGATGCGGcgtttcggtttcg                                                                                                                                                                     >  2:826380/1‑288 (MQ=255)
                                                                                                              gATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGc                                                                                                                                                                  <  1:1633657/289‑1 (MQ=255)
                                                                                                                 gCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTa                                                                                                                                                                                                                                                  >  2:2467303/1‑207 (MQ=255)
                                                                                                                    tttttGCCCGGCGCTGATGACTGAACTGTATCGCCACCGGGGCGGGGATACCGACTTTCCGGCAGGTGTTATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCgg                                                                                                                                                             <  2:1576118/288‑1 (MQ=255)
                                                                                                                     ttttGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCa                                                                                                                                                           <  1:791597/289‑1 (MQ=255)
                                                                                                                         gCCAGGCGCTGATGACTGAACTGTAACGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACCGGGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACg                                                                                                                                                        <  1:1836523/289‑1 (MQ=255)
                                                                                                                          ccAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CCACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCCGTCTTATTCGCCCGGGAGCTACCGGCTACGGTCTGGTTTATTTCCCAGAAGCAATGCTAAAAAGCCACGGTAAGGGTTTTTAAGGGATGC‑GGGTTTCCGTTTCTGGCTCCGGCAACGt                                                                                                                                                       >  2:1337103/1‑288 (MQ=255)
                                                                                                                           cAGGCGCTGTTGACTGAACTGACTCGCCACCTGGGCGCTGATACCGTCGGTCTGGCAGGTGATGTCGGGGTTGGTGGTCGGGAAGTCGGCTTTCTGGCGGGGATGATGAAAAAGCTCTC‑CATCGATACCGCCGTCGTTTTCACC‑GGTAAGTTCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAATCTACCGGCTACGGTCTGGTTTATTTCACAGACGCAATGCTAAAACGCCACGGTATTGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTc                                                                                                                                                      <  2:2493664/288‑1 (MQ=255)
                                                                                                                           cAGGCGCTGAGGACTGAACTGTATCGCCACCGGGGGGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGTAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTc                                                                                                                                                      <  1:384035/288‑1 (MQ=255)
                                                                                                                                 cTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc                                                                                                                                                                                                            <  1:1915062/229‑1 (MQ=255)
                                                                                                                                      gaCTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCg                                                                                                                                                     <  1:1483182/278‑1 (MQ=255)
                                                                                                                                           aaCTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGc                                                                                                                                           <  1:578813/283‑1 (MQ=255)
                                                                                                                                                tATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTcac                                                                                                                                                                                                                                <  1:3150812/194‑1 (MQ=255)
                                                                                                                                                tATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCCC‑CAACAATACCGCCTGCGTCCTCACC‑GGGTAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCCGGTTTATTTCACAGAAGCAATGCTAAAACCCCCCGGTAGGGGCTTTGAAGGGATGC‑TCGTTTCCGTTTTTGGGTTCGCCAACGTCGCCCAGTACGCtctgctcctta                                                                                                                                >  2:1483182/1‑279 (MQ=255)
                                                                                                                                                  tCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTaaaa                                                                                                                                                                                                                <  2:466758/208‑1 (MQ=255)
                                                                                                                                                  tCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTaaaa                                                                                                                                                                                                                >  1:466758/1‑208 (MQ=255)
                                                                                                                                                     ccACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGGCTTATTCGCCCGGGAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGGATGGGTTTTGAAGGGATGC‑GCGTTTCCGGTTCTGGGCCCGGCAAAGCCGCCCCGGTCGCTATCGAAAAAACgttt                                                                                                                           >  2:578813/1‑286 (MQ=255)
                                                                                                                                                          tGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGcc                                                                                                                                                                                                            <  1:2472283/204‑1 (MQ=255)
                                                                                                                                                               gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  1:655024/289‑1 (MQ=255)
                                                                                                                                                               gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  1:917092/289‑1 (MQ=255)
                                                                                                                                                               gcgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  1:934095/289‑1 (MQ=255)
                                                                                                                                                                cgGATGCCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  1:1577853/288‑1 (MQ=255)
                                                                                                                                                                cgGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  1:2710567/288‑1 (MQ=255)
                                                                                                                                                                  gATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCt                                                                                                               <  1:2867970/288‑1 (MQ=255)
                                                                                                                                                                             tacggcggGTGATATCGGGATGAGGGGTCGTGCAGTCGGCGTTATGGCGGTGGTGATGGATAAGCTCTC‑TGTCAGTACCGCCTGCGGCTTGACC‑GGTAAGGGCATTTCAGTTGGCGGCAGTCGTATTCGCCCGGAAGCTAGCGGCTGCGGTCTGGTTTATGTCACAGAAGCAATGCTAAAACGCGACGGTATGGGTTTTGGAGGGATGC‑GCGTTTCCGTTTCGGGCTCCGGCAGCGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATGTGGTGCTCGTGTGAGCACt                                                                                                   <  2:2385982/287‑1 (MQ=255)
                                                                                                                                                                             tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATggg                                                                                                                                                                                                  >  2:2979792/1‑195 (MQ=255)
                                                                                                                                                                             tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATggg                                                                                                                                                                                                  <  1:2979792/195‑1 (MQ=255)
                                                                                                                                                                             tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 <  2:625873/275‑1 (MQ=255)
                                                                                                                                                                             tCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCt                                                                                                               <  2:3059610/277‑1 (MQ=255)
                                                                                                                                                                                         tatCGGGGTTGGTGTGCGTGAAGTCGGCTGTTTGGGGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTcc                                                                                       <  2:2903680/289‑1 (MQ=255)
                                                                                                                                                                                                gTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTggcgg                                                                                                                                                                                                                                                                                >  1:3063315/1‑98 (MQ=255)
                                                                                                                                                                                                gTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCt                                                                                                               <  1:2301983/258‑1 (MQ=255)
                                                                                                                                                                                                 ttGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCa                                                                                <  1:697775/288‑1 (MQ=255)
                                                                                                                                                                                                   ggtggtCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTggcgg                                                                                                                                                                                                                                                                                >  1:1363967/1‑95 (MQ=255)
                                                                                                                                                                                                   ggtggtCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGc                                                                                                                                                                                                             <  2:2566055/162‑1 (MQ=255)
                                                                                                                                                                                                         cGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑Gcgtttc                                                                                                                                                                            >  1:2760947/1‑188 (MQ=255)
                                                                                                                                                                                                           tGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCg                                                                                                                              >  2:209759/1‑232 (MQ=255)
                                                                                                                                                                                                           tGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGCCGCCCAGTACGCTATCGAAAAAGCGATGGAGTTTGGTGCTCGTGTGCTCACTGCGTCAGACTCCAGCGGCACGGCAGTtgat                                                                     >  1:25252/1‑289 (MQ=255)
                                                                                                                                                                                                                 cGGCTTGATGGGAGGGATGCTGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTGCACA‑GGTAAGTGCCTTTAATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGTGACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGGTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGc                                                               <  2:2198036/289‑1 (MQ=255)
                                                                                                                                                                                                                              gggATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACg                                                                                                                                                        >  2:3179544/1‑187 (MQ=255)
                                                                                                                                                                                                                              gggATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACg                                                                                                                                                        <  1:3179544/187‑1 (MQ=255)
                                                                                                                                                                                                                              gggATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAAAGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGGGCCCGTGTGATTACTGCGTCAGACTCCAGCGGCCCTGGAGTTGATGAAAGGGGATTTACTaaat                                                  >  2:2718247/1‑288 (MQ=255)
                                                                                                                                                                                                                                gatgatGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAaga                                                 <  1:1564615/288‑1 (MQ=255)
                                                                                                                                                                                                                                      gaAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGGATGGGGTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCCGACTCCAGCGGCAATGTTGTTGATGAAAGCGGATTCCCGAAAGAGAAAccg                                          >  2:1780446/1‑287 (MQ=255)
                                                                                                                                                                                                                                        aaaaGCTTTC‑AAAAAATACCCCCGTCGTGTTCACC‑GGTAAGGTGCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGc                                        <  2:1038042/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aaaaGCACTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTGCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGc                                        <  1:1802679/289‑1 (MQ=255)
                                                                                                                                                                                                                                          aaGCTTTC‑CACCACTACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCAc                                      <  2:2795495/289‑1 (MQ=255)
                                                                                                                                                                                                                                             ctctC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACg                                     >  1:867780/1‑287 (MQ=255)
                                                                                                                                                                                                                                               ctc‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCg                                                                                                                                                     <  2:2140961/173‑1 (MQ=255)
                                                                                                                                                                                                                                               ctc‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTg                                                                                                                 >  2:664401/1‑209 (MQ=255)
                                                                                                                                                                                                                                                         tACCGCTTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTc                                                                                                                                                      <  2:1619135/163‑1 (MQ=255)
                                                                                                                                                                                                                                                           ccGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGccc                                                                                                                                                  >  2:533490/1‑165 (MQ=255)
                                                                                                                                                                                                                                                           ccGCCTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCaa                      >  1:1755707/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTTGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGACTTTGGTGCTCGTGTGATCACTTCTTCAGACACCAGCGGCCCCGTCGTTGGTGAAATCTGATCCACGAAAACGAAACTGGCACGTCTTAGTGAAAACAAag                    >  2:2357640/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCt                                                                                                               <  1:2170828/197‑1 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAg                                                                                     <  1:606502/223‑1 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTTTAGTTGATGAAAGCGGATTCACGAAAGAGAAAATGGCACGTCTTATCGAAATCAAag                    >  2:1522893/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              ccTGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACGGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAag                    >  1:19631/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                tGCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAagcca                 >  2:397276/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                 gCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAATCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGACTCCGGCTACGTCGCCCAGTACGCTATCGACAAAGCGATGGAATTTGGAGCTCGTGTGATCACTGCGTCAGCCCCCAGCTGCACTGTAGTTGATGAAAGCGGATTCCCGACAGAGAAACTGGCACGTTTAGTGTAAATCAAagcca                 >  2:2419984/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                 gCGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTg                                                                             <  2:1933084/228‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cGTCTTCACC‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAg                                                                                     >  2:263031/1‑219 (MQ=255)
                                                                                                                                                                                                                                                                       tcccc‑GGTAAGGGCCGTTCATTTTGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGAGGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGa          <  2:1755707/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                        cACC‑GGTAAGGGCCTTTCCTTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATc                              >  1:2130713/1‑268 (MQ=255)
                                                                                                                                                                                                                                                                           c‑GGTAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGTCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGTCAGACTCCAGCGGCACCGTAGGTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATAAAAGCCAGCcgggtaggt      >  2:913037/1‑282 (MQ=255)
                                                                                                                                                                                                                                                                               tAAGGGCCTTTCATTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCgtca                                                                                             >  2:779708/1‑196 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
AAATTCCTCGGCTTTGAACAAACCTTCAAAAATGCCCTGACTACTCTGCCGATGGGCGGTGGTAAAGGCGGCAGCGATTTCGATCCGAAAGGAAAAAGCGAAGGTGAAGTGATGCGTTTTTGCCAGGCGCTGATGACTGAACTGTATCGCCACCTGGGCGCGGATACCGACGTTCCGGCAGGTGATATCGGGGTTGGTGGTCGTGAAGTCGGCTTTATGGCGGGGATGATGAAAAAGCTCTC‑CAACAATACCGCCTGCGTCTTCACC‑GGTAAGGGCCTTAGTTTTGGCGGCAGTCTTATTCGCCCGGAAGCTACCGGCTACGGTCTGGTTTATTTCACAGAAGCAATGCTAAAACGCCACGGTATGGGTTTTGAAGGGATGC‑GCGTTTCCGTTTCTGGCTCCGGCAACGTCGCCCAGTACGCTATCGAAAAAGCGATGGAATTTGGTGCTCGTGTGATCACTGCGAGTGACTCCAGCGGCACTGTAGTTGATGAAAGCGGATTCACGAAAGAGAAACTGGCACGTCTTATCGAAATCAAAGCCAGCCGCGATGGTCGAG  >  CP042583/1524745‑1525303

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A