Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,551,134 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,551,134 | 0 | A | T | 99.1%
| 494.8
/ NA
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/1); major base T (119/92); minor base G (0/2); total (119/95) |
| Fisher's exact test for biased strand distribution p-value = 1.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,551,135 | 0 | G | C | 99.5%
| 499.8
/ NA
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (119/94); total (119/95) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 |
| * | CP042583 | 1,551,136 | 0 | C | G | 99.5%
| 500.7
/ ‑4.9
| 214 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (119/94); minor base . (0/1); total (119/95) |
| Fisher's exact test for biased strand distribution p-value = 4.44e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 214 total aligned reads displayed.
ACTGTGCGAATGGTATTTGCGCGTACGTAAAAGCTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGAGC‑ATCTCCGAGGCCATTAATAAGCGTAGCGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTAGCAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACC > CP042583/1550859‑1551414
|||
gtgCGAATGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑a > 1:1361636/1‑289 (MQ=255)
gCGATTGGTGTTTGCGCGTCCGTCAATCGTCTTAACACCCCTGGCCCGGTACACATGTTACCGGGCCTACACCGACAGCGAACCGTGGGCCTTAGAAGCGGAAACACAGGCGTAGCATACAGTTGGTAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACTGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑Ac < 2:1791332/288‑1 (MQ=255)
tGGTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAgcggc < 1:350876/289‑1 (MQ=255)
ggTATTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAgcggcg < 1:825475/289‑1 (MQ=255)
gTAGTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACACCGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAgcggcg < 1:1778234/288‑1 (MQ=255)
aTTTGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGaa > 1:1656133/1‑288 (MQ=255)
tttGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACAAATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCTGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATc < 1:489262/289‑1 (MQ=255)
ttGCGCGTACGTAAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATCGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATcc < 1:302389/289‑1 (MQ=255)
tacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCa > 2:1859798/1‑289 (MQ=255)
tacgtaAATCGTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAAAAGTCG‑ATCTCCGAGGCCGTTAATAAGCGTTCGGTGACTGAAGTCG‑ACAGCGGCGAATCCGTAGCCa > 2:196609/1‑289 (MQ=255)
taaagcgacgaaacaagCCTGGCCCAGTACACATGTTACCGGCACTAAAACGACAGTGAACCGTGGTCCTGAGAAGCGGCAACACAGGCATAGCATACGGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTcc < 1:1488319/278‑1 (MQ=255)
aatcgacgtAACAACCCGGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGACTGAGAAGCGGCAAAACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCa < 2:429136/281‑1 (MQ=255)
gttttAACAACCTTGGCCCGTTAACCATGTTAACGGGCCTAGAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACATCGGCGAATCCGTATCCATTCCCACGGa < 1:1419601/286‑1 (MQ=255)
tctTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATGAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCACTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATACATTCCCACGGaa > 1:1285376/1‑289 (MQ=255)
caacCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATAtt > 1:516756/1‑289 (MQ=255)
ggCCCGGTACCCATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCCCACAGTTGGCAAATGTAGTACGTGGGGCATATGACCTGGCTTCTTGACCGGCGTCTCAACGGCAAAAACAAAAGCACGGTGAATACCCACCGCATTTTACGCCGTTATAAAGCTCAAATTAAACAATCT‑ATCTCCGAGGCCATTAATAAGCGTTCGGCTACTTACGTCGCACA‑CGGCGAACCCCGAGCCAGTCCACCTGAAGACATTAGCGag > 2:1383440/1‑287 (MQ=255)
gCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAgcggc > 2:1011284/1‑251 (MQ=255)
gCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAgcggc < 1:1011284/251‑1 (MQ=255)
gTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTACCCATTCCCACGGAAGATATTAGCGAACCGATGt > 1:65490/1‑289 (MQ=255)
tACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGtt > 1:537964/1‑289 (MQ=255)
tACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGt < 2:237153/288‑1 (MQ=255)
aCCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAgggg > 2:309150/1‑289 (MQ=255)
aCCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAggg > 2:1299276/1‑288 (MQ=255)
cGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAACAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCTGCGAATCCGTATCCATTCCCACGGAAGATATTAGAGAACCGATGTTTCATCAGGGGCg > 1:1253760/1‑289 (MQ=255)
gCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑CCAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGAGGTTTATGCAGGGGCGTg > 2:59449/1‑288 (MQ=255)
gCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCCTTCCCACGGAAGATATTAGCGAACCGAAGTCTCATCAGGGGCGTgg > 2:1551983/1‑289 (MQ=255)
gCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGa < 2:1671951/253‑1 (MQ=255)
ccTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCa < 1:605919/248‑1 (MQ=255)
ccTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTgg < 1:230282/288‑1 (MQ=255)
cgacacCGCCAGCGACCCGTGGGCCTGGGAAGCGAGAACACAGCCGTAGCTTACAGTTGGAAAATGGAGTGCGGGGGGCATATGACCGGGTTTATTGACAGGCGTCTGAACGGCAAAAACAAAAGCATGGGGAATCGCCAGCGTTTTTGACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCGGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGGGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCg < 2:1363760/287‑1 (MQ=255)
cTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCg < 2:1361636/289‑1 (MQ=255)
aCAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACg < 2:174271/247‑1 (MQ=255)
gAACCGTGGGCATGGGAAACGGAAAAACAGGCGTAGCATAACGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGCCCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATGGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCAcc < 2:1255644/288‑1 (MQ=255)
tGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCgg > 2:1450564/1‑288 (MQ=255)
tGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCgg > 1:1027600/1‑288 (MQ=255)
agaAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCa > 1:1585209/1‑289 (MQ=255)
aaCACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCAtt < 1:947758/289‑1 (MQ=255)
aaCACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCAt < 1:1875442/288‑1 (MQ=255)
aaCACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCAt < 1:69538/288‑1 (MQ=255)
aTACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGa < 1:196609/288‑1 (MQ=255)
aTACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGAc < 2:825524/289‑1 (MQ=255)
cAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTCTAACGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGGGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGa > 2:862456/1‑289 (MQ=255)
cAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGCACGACCGa > 1:208809/1‑289 (MQ=255)
cAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGa > 1:721748/1‑289 (MQ=255)
cAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGa > 1:882842/1‑289 (MQ=255)
ttGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAAtt > 1:150232/1‑289 (MQ=255)
gCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCACTGACCATTTCGTCCAGAACGACCGAATTGa > 2:1105800/1‑288 (MQ=255)
gaaaTGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa < 2:1711827/287‑1 (MQ=255)
cAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa < 1:1105800/288‑1 (MQ=255)
cAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa < 2:516756/288‑1 (MQ=255)
cAAAGGTAGTACGGGGGGAATAATACCGGGTTTATTGACCGGCGTCTAAACGGCAAAAACAAAAGCATGGGGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa < 2:537964/288‑1 (MQ=255)
aaaTTTAGTCGGGGGGGCAAATGACCTGGTTGATGAACCGGCGTCTGAACGGAAAAAACAAAAGCATAGAGAATCGCCAGCGTTTGTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAAc < 2:699814/288‑1 (MQ=255)
aaaTGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAAc < 1:13820/288‑1 (MQ=255)
aaaTGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACATCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAAc < 2:112890/288‑1 (MQ=255)
tGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGAc > 1:1220879/1‑275 (MQ=255)
taCGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAgg > 1:362254/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCa > 2:955124/1‑173 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCCTTTCGTCCATAACGACCGAATTGCACGTCCCCCGGGGggc > 2:1025026/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggc > 1:137199/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggc > 1:1623435/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggc > 1:1122850/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggc > 1:1724463/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGCCAATGACCATTTCGTCCAGCACGACCGAATTGAACGTCCCCAGGGGggc > 2:289756/1‑289 (MQ=255)
ggggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCAGGGCAATGACCATATCGTCCAGAACGACCGAATTGAACGTCCCCTGGGTggc > 2:906339/1‑289 (MQ=255)
ggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggcgg > 1:775194/1‑289 (MQ=255)
ggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggcg > 1:1712823/1‑288 (MQ=255)
ggCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTggcg > 2:644911/1‑288 (MQ=255)
cATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCCGGGGCGTGGCGGTCTTCGCCACCGCGTGCATCCGGGCAAGGACCATTTCGTCCAGAACGACCAAATCTAAAGTCCACAGGGCGacggcg > 2:149244/1‑289 (MQ=255)
tatGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGa < 2:775194/289‑1 (MQ=255)
tGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGACGATATTAGCGAACAGATGTTTCATCAGGGGCGTGGCGGTATGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACAGAATTGAAGGGCCCAGGGGTGGCGGGGGAgg > 2:354688/1‑289 (MQ=255)
gACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCg > 1:670715/1‑206 (MQ=255)
tgggTTTATGGCCCGGCGGCTGAACGGGAAAACAAAAAGCATGGTGAATCGCCAGGGGTTTTTACGCAGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCAGAGGCCATTAATAAGCGTGCGGGGAATGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCGCGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTc < 2:1827211/286‑1 (MQ=255)
cTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATCGAACGTCCCCAGGGTGGCGGCGGAGGTTcc > 2:588513/1‑289 (MQ=255)
ttGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGa > 2:1626629/1‑275 (MQ=255)
cGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa < 1:626524/249‑1 (MQ=255)
cGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa > 2:626524/1‑249 (MQ=255)
cGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGaa > 2:1506987/1‑249 (MQ=255)
cGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAgg > 1:86946/1‑289 (MQ=255)
cTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGggccagg < 1:1702211/289‑1 (MQ=255)
aaCGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCAACCGGGCAATGACCATTTCGTCCAGAACGGCCGAATTGAACGTCCCCAGGGTGGCGGCGCAGGTTCCGGCAGGGGTGAGggacgggcac > 2:21341/1‑287 (MQ=255)
cGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGgccagc < 1:1542602/289‑1 (MQ=255)
cAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGggccaggcctgtct > 1:1405292/1‑283 (MQ=255)
aaaaaCCAAAGCATGGTGAATGACCCGCGTTTTGTACGCCGTTAAAACGCGAAAATTAAACAGTCG‑ATATCCGAGGCCATTAATAACCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGAAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAgg < 2:887659/289‑1 (MQ=255)
aaaGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGa < 1:1025026/289‑1 (MQ=255)
tGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCa < 1:447815/289‑1 (MQ=255)
gCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAGGGTCAGAATGAATTTg > 1:1456486/1‑287 (MQ=255)
tttttACGCCGTTATAAAGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCttt < 1:1449856/288‑1 (MQ=255)
aaGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGa < 1:1627435/289‑1 (MQ=255)
aaGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGa < 1:593820/289‑1 (MQ=255)
aaGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGa < 2:1543455/289‑1 (MQ=255)
aaGCGCAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGa < 2:1176759/289‑1 (MQ=255)
cAAATTAAACAGTCG‑ATCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTa > 1:1138250/1‑287 (MQ=255)
aaaTTAAACA‑AGCTATCTCGGAGGACATTAAGAAGCGTGCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGAGATGAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCATGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATc < 2:1428741/288‑1 (MQ=255)
cgaTCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCtt > 1:1546172/3‑289 (MQ=255)
cgaTCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCtt > 2:1073567/3‑289 (MQ=255)
cgaTCTCCGAGGCCATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCtt > 1:1047346/3‑289 (MQ=255)
cATTAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTgg > 1:1820656/1‑287 (MQ=255)
ttAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCGCCAGGGTGGCGTCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGAGGAATTTGTCTTTGAGCTTTCGAAAGCTGAGTATCTTGATCTGCTCTTTGactggctattat > 2:547955/1‑277 (MQ=255)
ttAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTg > 1:284973/1‑276 (MQ=255)
ttAATAAGCGTTCGGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTTCGAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCtt > 1:1512371/1‑289 (MQ=255)
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ACTGTGCGAATGGTATTTGCGCGTACGTAAAAGCTCTTAACAACCCTGGCCCGGTACACATGTTACCGGGCCTACAACGACAGCGAACCGTGGGCCTGAGAAGCGGCAACACAGGCGTAGCATACAGTTGGCAAATGTAGTACGGGGGGCATATGACCTGGTTTATTGACCGGCGTCTGAACGGCAAAAACAAAAGCATGGTGAATCGCCAGCGTTTTTTACGCCGTTATAAAGCGCAAATTAAACAGAGC‑ATCTCCGAGGCCATTAATAAGCGTAGCGTGACTGACGTCG‑ACAGCGGCGAATCCGTATCCATTCCCACGGAAGATATTAGCGAACCGATGTTTCATCAGGGGCGTGGCGGTCTGCGCCACCGCGTGCATCCGGGCAATGACCATTTCGTCCAGAACGACCGAATTGAACGTCCCCAGGGTGGCGGCGGAGGTTCCGGCAGTGGTCAGGGCCAGGCCAGCCAGGATGGTGAAGGTCAGGATGAATTTGTCTTTCAGATTAGCAAAGATGAGTATCTTGATCTGCTCTTTGAAGATTTGGCCTTACC > CP042583/1550859‑1551414
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A