Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,561,015 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,561,015 | 0 | G | C | 99.2%
| 612.2
/ ‑3.4
| 260 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (130/127); minor base . (1/1); total (132/128) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,561,016 | 0 | C | G | 98.9%
| 606.5
/ NA
| 260 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (2/1); new base G (130/127); total (132/128) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,561,017 | 0 | T | A | 99.2%
| 618.7
/ ‑5.2
| 260 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (131/127); minor base G (1/1); total (132/128) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
Only 100 of 260 total aligned reads displayed.
TCAGGGAGGATTATAGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGACTGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAAACTAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAAGCTCAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAA > CP042583/1560735‑1561294
|||
tCAGGGAGGATTATAGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATa < 1:550929/289‑1 (MQ=255)
gaTTATAGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACaaaa > 2:1852308/1‑289 (MQ=255)
ttATAGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAAt < 1:493792/288‑1 (MQ=255)
aGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCtt < 2:1290446/289‑1 (MQ=255)
aGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCtt < 1:1108039/289‑1 (MQ=255)
aGATGGGAAGCCCGACACAACGCGGGGCGAAAAGCA‑CAAGGTTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCtt < 1:6645/289‑1 (MQ=255)
gggAAGCCCGCGACACCGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTACCAACTTTAGCCAGTTTCTTCTTTCTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGACGCTCAAATAGCACAAACTCACCAGCTCCATCGCCGCCGTCAGAATAAAGAATGAAACTCCCGTAAGTGAGGCATTAAC‑ATCGAAAAACTGTACGAACAACGACAC‑TGAGAACAAAATGGCATTCgc > 2:76133/1‑288 (MQ=255)
gggAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCgg > 1:813020/1‑289 (MQ=255)
gggAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCgg > 1:1525883/1‑289 (MQ=255)
gggAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCgg > 1:824940/1‑289 (MQ=255)
gggAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCgg > 1:1076850/1‑289 (MQ=255)
gAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGG‑TTGCCGCGTTGCCCGTCGGGCAGGGAAAACCAAGAAAAACAAACCCAACCGTGAGTTTGCAAACTTAGCCCGTTTTCTTTTGGTACGTAAGTACTGCCTGACAAAAGCCCCAGATATAAACCGGGAACCCAAATAGAAGAAAACTAACAGTTCCCGCCCTGCCGCCCGAAAAAAGAAAGGAAATCCCTGAAGTGGGGGCTTAACAATCAAAAAACTG‑ACGGAAAACGAAAC‑AAGAAACAAAAAGGCCTTCGGaat > 2:6645/1‑287 (MQ=255)
aaGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGAtt > 1:646597/1‑289 (MQ=255)
cgcgACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑CAAGAAAAAAATGGCATTAGGATCAGTCa > 2:107280/1‑289 (MQ=255)
cAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCt < 2:418115/288‑1 (MQ=255)
cgc‑gGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaaa > 1:1595486/1‑289 (MQ=255)
tGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcg < 1:592052/289‑1 (MQ=255)
aGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAAcgcgcg < 1:531443/289‑1 (MQ=255)
tCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCTAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTCAGTATTAGTCAGACTCAAAATTAACGAGCGTTTa > 2:229081/1‑289 (MQ=255)
aacagcGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc < 2:1555728/284‑1 (MQ=255)
aGCGTCGCCAGTCGGGCAGCGCAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCa < 2:88370/288‑1 (MQ=255)
aGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCa < 1:1782017/288‑1 (MQ=255)
aGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCa < 2:362243/288‑1 (MQ=255)
aGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCa < 2:1102391/288‑1 (MQ=255)
aGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCa < 2:714124/288‑1 (MQ=255)
cGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAgacacg > 2:1396376/1‑284 (MQ=255)
gTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc < 1:229810/286‑1 (MQ=255)
tCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTa > 2:629430/1‑289 (MQ=255)
tCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTa > 2:58082/1‑289 (MQ=255)
cGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTggg < 2:1312246/286‑1 (MQ=255)
cAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATc > 1:1139268/1‑289 (MQ=255)
ccACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGc < 1:567574/289‑1 (MQ=255)
aCGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGcc > 2:1174378/1‑288 (MQ=255)
tcagtgagTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCt > 2:1793562/8‑288 (MQ=255)
agTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa < 1:1013226/277‑1 (MQ=255)
gCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTcgcg > 2:811919/1‑289 (MQ=255)
gCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTcgcg > 2:823153/1‑289 (MQ=255)
ttCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTcc < 2:1084766/289‑1 (MQ=255)
ttCGTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTAc < 1:1173765/286‑1 (MQ=255)
ttttGGTACGTATGTCCTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAg < 2:165672/289‑1 (MQ=255)
tttGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGGTTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGa < 1:736173/289‑1 (MQ=255)
cTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAAc > 2:261815/1‑289 (MQ=255)
cTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAAc > 1:1088155/1‑289 (MQ=255)
cTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAAc > 2:1702212/1‑289 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGc > 1:1229691/1‑227 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa > 2:1883024/1‑235 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa < 1:1130365/235‑1 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAAtttt > 2:1134365/1‑261 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATaaaa > 2:1694333/1‑285 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc > 1:1151468/1‑288 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc > 1:1475247/1‑288 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc > 1:1852669/1‑288 (MQ=255)
cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGAGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCTCGTAAAGAATTTTACTCCCCAGCTAGAGCAAATAAAActc > 2:163583/1‑286 (MQ=255)
gTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAc < 2:1048831/289‑1 (MQ=255)
gTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACAAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAACATTAACGCGCGATTAAAGATAGCACCGTATTGGGGCTCATCGGATTTGGCCACGATATTTTTACCCTTCAGTGTCGCGTTACGAATTTTACTCCCCAGCTAGCGCCAACAAAACgga > 2:1204460/1‑286 (MQ=255)
tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAGTAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAcc > 1:854124/1‑289 (MQ=255)
tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAcc > 2:1727356/1‑289 (MQ=255)
tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAcc > 1:167027/1‑289 (MQ=255)
tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAcc > 2:454841/1‑289 (MQ=255)
tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCACAAGATAGAGCAAATAAAACGCAcc > 1:31928/1‑289 (MQ=255)
gACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGCTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATGTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCAc < 2:854124/287‑1 (MQ=255)
ccAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCCCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCACGATAGAGCAAATAACACGCACCAGGGTAACGTa > 2:1267984/1‑289 (MQ=255)
tataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACa < 1:742035/286‑1 (MQ=255)
tataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATg < 1:1410316/289‑1 (MQ=255)
ataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTTCGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATa < 1:1610946/278‑1 (MQ=255)
aaTCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTg < 2:1411854/289‑1 (MQ=255)
gAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaataat > 1:1464983/1‑289 (MQ=255)
aGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGTTAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGggtggt < 2:1548897/289‑1 (MQ=255)
aGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATaga > 1:1870255/1‑234 (MQ=255)
aaCTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTc > 1:459045/1‑284 (MQ=255)
aCCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATg > 1:1040769/1‑289 (MQ=255)
ccAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAACAATAGCACCGTATTGGGGCCTATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGCAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACTATGTTGAATAATATCGGAGTGGTCTTAATTCATg > 2:1889984/1‑288 (MQ=255)
ccAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATg > 1:136998/1‑288 (MQ=255)
tccgacGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGAGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGc < 2:147669/282‑1 (MQ=255)
tCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCg < 1:1892022/286‑1 (MQ=255)
gCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTcc > 1:894924/1‑289 (MQ=255)
aaTAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGa < 2:829474/289‑1 (MQ=255)
aTAAAGAATGAAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCa < 2:592830/286‑1 (MQ=255)
cccGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCAt < 2:899292/289‑1 (MQ=255)
cgtagatgGGGCATTAGC‑ATCGATAAACTGGACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAAGTAACGCGCGTTTCAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTACAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAACCGCACCAAGATAACGTACAATGTTGAATAATCTCGGGGTGGTCTTAATGAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCg < 2:1334590/283‑1 (MQ=255)
tgtgGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCaa > 2:504649/1‑289 (MQ=255)
gtgGGGCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCaat < 1:1696719/289‑1 (MQ=255)
gggCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCaataaa > 1:1723333/1‑289 (MQ=255)
ggCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCg < 1:1280326/280‑1 (MQ=255)
ggCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCaataaat > 1:1217205/1‑289 (MQ=255)
ggCATTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCaataaat > 2:792113/1‑289 (MQ=255)
aTTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCggg > 2:1523631/1‑220 (MQ=255)
aTTAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGa > 2:543939/1‑259 (MQ=255)
tAAC‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACAcc > 1:1182052/1‑289 (MQ=255)
c‑ATCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCa < 1:792113/289‑1 (MQ=255)
tCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCa > 1:373559/1‑183 (MQ=255)
tCGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCa < 2:373559/183‑1 (MQ=255)
cGATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAgg > 1:601016/1‑288 (MQ=255)
gATAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGcc > 1:154315/1‑289 (MQ=255)
aTAAACTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGcc > 1:572226/1‑288 (MQ=255)
aCTGTACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGa > 1:966009/1‑245 (MQ=255)
tGTACGAAAAA‑CGAACAATAGAACAAAATGGCTGTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGAt < 2:1040769/289‑1 (MQ=255)
tACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaa > 2:1129100/1‑192 (MQ=255)
tACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATa > 1:626671/1‑288 (MQ=255)
tACGAAAAACGACAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTAGCCACTCCAGCCCCATGCCAGAAACATCAATACCGCATCCCCAATCAATACCCCACATGCCCCAAGaaa > 2:1573008/1‑287 (MQ=255)
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TCAGGGAGGATTATAGATGGGAAGCCCGCGACAACGC‑GGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGACTGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAAACTAATTCCCGTATGTGGGGCATTAAC‑ATCGATAAACTGTACGAAAAAGCTCAC‑ATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAG‑CCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAA > CP042583/1560735‑1561294
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A