Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,561,015 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,561,0150GC99.6% 521.8 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (109/112);  total (110/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 8.14e-01
*CP0425831,561,0160CG99.6% 515.3 / NA 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (109/112);  total (110/113)
Fisher's exact test for biased strand distribution p-value = 4.95e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,561,0170TA99.6% 524.0 / ‑5.6 223intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (108/113);  minor base G (1/0);  total (110/113)
Fisher's exact test for biased strand distribution p-value = 4.91e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 223 total aligned reads displayed.

CAGGGAGGATTATAGATGGGAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGACTGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAAACTAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAAGCTCA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACC  >  CP042583/1560736‑1561296
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
       gaTTATAGATGGGAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACaaaa                                                                                                                                                                                                                                                                           >  1:818442/1‑289 (MQ=255)
               aTGGGAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTc                                                                                                                                                                                                                                                                   >  1:260826/1‑289 (MQ=255)
                tGGGAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTTCGAAAAACGACA‑CATAGAACAAAATGGCttt                                                                                                                                                                                                                                                                    <  1:194884/287‑1 (MQ=255)
                 gggAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCCATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCATTATGAGGGGCATGAACATCGATAAACGGTACGAAAAACGACA‑CAAAGAACAAAATGGCTTTCgg                                                                                                                                                                                                                                                                 >  2:435852/1‑289 (MQ=255)
                 gggAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGTCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCgg                                                                                                                                                                                                                                                                 >  1:1135479/1‑289 (MQ=255)
                 gggAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCgg                                                                                                                                                                                                                                                                 >  1:307226/1‑289 (MQ=255)
                 gggAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCACCGCCGCCGCCAGAAAAAAGAATGAAATTCACGTCTGTGGACCATTCACATCCATAAAATGGACGAAAAACGCCC‑CAAAGAACAAAATGGCTTTCgg                                                                                                                                                                                                                                                                 >  2:1773008/1‑289 (MQ=255)
                    aaGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGAt                                                                                                                                                                                                                                                               <  1:1740923/288‑1 (MQ=255)
                         cgcgACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCa                                                                                                                                                                                                                                                         >  1:599796/1‑289 (MQ=255)
                         cgcgACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGACGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGtaa                                                                                                                                                                                                                                                         >  1:1737211/1‑287 (MQ=255)
                                 cgcgGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCaaa                                                                                                                                                                                                                                                 >  1:1874195/1‑289 (MQ=255)
                                      gCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTaa                                                                                                                                                                                                                                            >  1:393611/1‑289 (MQ=255)
                                               aTCGGGATTGCAACTGCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTGGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGttt                                                                                                                                                                                                                                   <  2:418057/289‑1 (MQ=255)
                                               aTCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGttt                                                                                                                                                                                                                                   <  2:1391199/289‑1 (MQ=255)
                                                tCAGGATTGCAGCGTCGCCAGTCGGGCAGAGAAAACCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGTAACTCACCAGTTCCAGCGTAGCCGCCTGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATATACTGTACGACAACCGACC‑CATAGAACAAAATGGCCTTCGGATTAGTCAGGCTCACAATTAACGCGCGTTTa                                                                                                                                                                                                                                  >  2:1803102/1‑289 (MQ=255)
                                                  aGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACC‑CATAGAACAAAATGGCCTACGGATTAGTCAGGCTCAAAATTAACGAGCGTTTaaa                                                                                                                                                                                                                                >  2:1089052/1‑289 (MQ=255)
                                                       tGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCAAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAg                                                                                                                                                                                                                           <  2:1869946/289‑1 (MQ=255)
                                                         cAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGATCCAGCGTCGCCGACAGAATAAAGAATGAAATTCCCGTATGTGGGTCATTAACATCGATAAACTGTACGAAAAA‑CGCACCATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCCTTTAAAAATAGCa                                                                                                                                                                                                                         >  2:837811/1‑289 (MQ=255)
                                                             gTCGCCAGCCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc                                                                                                                                                                                                                        <  2:1004891/286‑1 (MQ=255)
                                                             gTCGACAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc                                                                                                                                                                                                                        <  2:1083473/286‑1 (MQ=255)
                                                               cGCCAGGCGGGCAGCGAAAACCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTAt                                                                                                                                                                                                                   <  1:1863552/289‑1 (MQ=255)
                                                                gCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAAt                                                                                                                                                                                                                             <  2:224260/278‑1 (MQ=255)
                                                                gCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAAt                                                                                                                                                                                                                             >  1:224260/1‑278 (MQ=255)
                                                                      cGGGCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTgggg                                                                                                                                                                                                              <  2:50689/287‑1 (MQ=255)
                                                                        ggCAGCGAAACCCACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGAAA‑CATAGAAAAAAAGGGCTTTCGGATTAGTCAGGCCAAAAATAAACGCCCGTTTAAAAATAGCACCGAATTGGGGCTCa                                                                                                                                                                                                          >  1:1587911/1‑289 (MQ=255)
                                                                                   ccACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc                                                                                                                                                                                                                        >  2:707835/1‑264 (MQ=255)
                                                                                   ccACGAACATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCAc                                                                                                                                                                                                                        <  1:707835/264‑1 (MQ=255)
                                                                                       gAACATCAAACCAGTCAGTGAGTTTCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACACAAGCACCAGATATAATCAGGAAGCACAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCg                                                                                                                                                                                           <  2:1913294/289‑1 (MQ=255)
                                                                                        aaCATCAAACCAATCAGTGAGTTGCCAACTTTAGCCAGTTGCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGc                                                                                                                                                                                          <  2:1389571/289‑1 (MQ=255)
                                                                                             cAAACCAATCAGTGAGTGGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTAttt                                                                                                                                                                                     <  1:871948/289‑1 (MQ=255)
                                                                                                accaataagtgagTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCCCCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa                                                                                                                                                                                  <  2:1102896/277‑1 (MQ=255)
                                                                                                aCCAATCAGTGAGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTTGGGCTCATCGGATTTGGCCTCGCTATTTTTa                                                                                                                                                                                  <  1:1917929/289‑1 (MQ=255)
                                                                                                     tcagtgagTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCt                                                                                                                                                                              >  1:1112155/8‑288 (MQ=255)
                                                                                                               gCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa                                                                                                                                                                                  <  2:1209078/274‑1 (MQ=255)
                                                                                                               gCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa                                                                                                                                                                                  >  1:1209078/1‑274 (MQ=255)
                                                                                                                       tAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAAt                                                                                                                                                           >  2:193290/1‑289 (MQ=255)
                                                                                                                           cAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTa                                                                                                                                                       <  2:599796/289‑1 (MQ=255)
                                                                                                                              tttCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAAtttt                                                                                                                                                        <  2:1667264/285‑1 (MQ=255)
                                                                                                                              tttCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAAtttt                                                                                                                                                        >  1:1667264/1‑285 (MQ=255)
                                                                                                                              tttCTTTTTGGTACGTATGATGTGAGTGAAAAAAGGACCGAATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTc                                                                                                                                                    <  2:529838/289‑1 (MQ=255)
                                                                                                                               ttCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTAc                                                                                                                                                      <  2:1446945/286‑1 (MQ=255)
                                                                                                                                     ttGGGACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCCCCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGAt                                                                                                                                             <  2:809459/289‑1 (MQ=255)
                                                                                                                                        gTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATaga                                                                                                                                          >  1:376376/1‑289 (MQ=255)
                                                                                                                                        gTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATaga                                                                                                                                          >  1:1153037/1‑289 (MQ=255)
                                                                                                                                                  aCTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATaaaa                                                                                                                                <  2:1138826/289‑1 (MQ=255)
                                                                                                                                                     gCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc                                                                                                                             >  2:150115/1‑289 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTAc                                                                                                                                                      <  1:822134/263‑1 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGc                                                                                                                                        <  1:583254/277‑1 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGc                                                                                                                                        >  2:583254/1‑277 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc                                                                                                                             >  2:1705163/1‑288 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGc                                                                                                                             >  1:517170/1‑288 (MQ=255)
                                                                                                                                                      cGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTACCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGTGCTCATCGGAATTGGCCTCGCTATTTTTACCCTTCAGGGTCGCTTAAAGAATTTTACTCCACAGATAGAGCAAATAAAACga                                                                                                                             >  1:235608/1‑287 (MQ=255)
                                                                                                                                                       gTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCa                                                                                                                            >  2:1255276/1‑288 (MQ=255)
                                                                                                                                                        tGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTa                                                                                                                                                                                  >  2:1588233/1‑233 (MQ=255)
                                                                                                                                                         gACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCa                                                                                                                         <  1:150115/289‑1 (MQ=255)
                                                                                                                                                           cAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAg                                                                                                                       <  2:565056/289‑1 (MQ=255)
                                                                                                                                                            aaaaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGa                                                                                                                      <  2:388436/289‑1 (MQ=255)
                                                                                                                                                              aaGCTCCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATa                                                                                                                    <  1:624934/289‑1 (MQ=255)
                                                                                                                                                              aaGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATa                                                                                                                    <  2:295599/289‑1 (MQ=255)
                                                                                                                                                                        tataATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATg                                                                                                          <  2:307226/289‑1 (MQ=255)
                                                                                                                                                                             tCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaa                                                                                                     <  1:1543756/289‑1 (MQ=255)
                                                                                                                                                                             tCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaa                                                                                                     <  1:1705163/289‑1 (MQ=255)
                                                                                                                                                                             tCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATAAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaa                                                                                                     <  2:1564542/289‑1 (MQ=255)
                                                                                                                                                                                ggAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTAGCTATTTTTACCCTTCAGGGTCGCGTAAATAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGAGAACGTACAATGTTGaataa                                                                                                  >  2:48798/1‑289 (MQ=255)
                                                                                                                                                                                 gAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaataat                                                                                                 >  2:1572769/1‑289 (MQ=255)
                                                                                                                                                                                 gAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGCGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGaataat                                                                                                 >  2:1110722/1‑289 (MQ=255)
                                                                                                                                                                                       cAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCggg                                                                                           <  1:492426/289‑1 (MQ=255)
                                                                                                                                                                                            aGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGggtggt                                                                                      <  2:818442/289‑1 (MQ=255)
                                                                                                                                                                                                   aCTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCttaatt                                                                               <  2:1053333/289‑1 (MQ=255)
                                                                                                                                                                                                       aCCAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATg                                                                           >  2:1830396/1‑289 (MQ=255)
                                                                                                                                                                                                        ccAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCTCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGt                                                                          >  2:905532/1‑289 (MQ=255)
                                                                                                                                                                                                        ccAGTTCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCgggg                                                                                          >  1:1078600/1‑273 (MQ=255)
                                                                                                                                                                                                            ttCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCg                                                                                                                                                                                           <  2:173847/172‑1 (MQ=255)
                                                                                                                                                                                                             tCCAGCGTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCg                                                                        <  1:1090438/286‑1 (MQ=255)
                                                                                                                                                                                                                   gTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTtaattaat                                                                            <  2:615235/276‑1 (MQ=255)
                                                                                                                                                                                                                   gTCGCCGCCAGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTc                                                                  <  1:1830396/286‑1 (MQ=255)
                                                                                                                                                                                                                            aGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGc                                                                       >  2:1306420/1‑272 (MQ=255)
                                                                                                                                                                                                                            aGAATAAAGAATGAAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGc                                                                       <  1:1306420/272‑1 (MQ=255)
                                                                                                                                                                                                                              aaaaaagatggaatttCCCGTATGTGGGGCATTAACATCGATACACTGTACAAAAAACGACA‑CATAGAACAAAATGTCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGa                                                    <  2:1523791/275‑1 (MQ=255)
                                                                                                                                                                                                                                      atgaaaTTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCaa                                            <  2:1112155/285‑1 (MQ=255)
                                                                                                                                                                                                                                       tgaaaTTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTATAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAAt                                           >  2:229838/4‑289 (MQ=255)
                                                                                                                                                                                                                                        gaaaTTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAAt                                           >  1:1002112/3‑288 (MQ=255)
                                                                                                                                                                                                                                        gaaaTTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAAt                                           >  1:328523/3‑288 (MQ=255)
                                                                                                                                                                                                                                        gaaaTTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATa                                          >  1:1523791/3‑289 (MQ=255)
                                                                                                                                                                                                                                            ttCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTATACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAAAGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCTAACCCAGCCCATGCCAGAAACATCAATACCGc                                      >  2:1538498/1‑289 (MQ=255)
                                                                                                                                                                                                                                                cGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCTCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCg                                  <  1:905532/289‑1 (MQ=255)
                                                                                                                                                                                                                                                cGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCg                                  <  1:146337/289‑1 (MQ=255)
                                                                                                                                                                                                                                                cGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCg                                  <  2:1597951/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   aagtgGGGAATTAACATCGATAAACATTACGAAAAACGACA‑CATAGCACAAAATGGCTTTCGGATTAGTCAGGCGCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGTGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGcc                                <  2:1421121/286‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTGTGGGGCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGcc                                <  1:1572769/288‑1 (MQ=255)
                                                                                                                                                                                                                                                        gggCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCaataaa                          >  1:1805187/1‑289 (MQ=255)
                                                                                                                                                                                                                                                         ggCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGcc                                <  2:735354/282‑1 (MQ=255)
                                                                                                                                                                                                                                                         ggCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGcc                                >  1:735354/1‑282 (MQ=255)
                                                                                                                                                                                                                                                         ggCATTAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGACTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTTGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCaataaaa                         >  2:878840/1‑288 (MQ=255)
                                                                                                                                                                                                                                                              tAACATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATacac                     >  1:1341922/1‑288 (MQ=255)
                                                                                                                                                                                                                                                               aaCATCGATAAACTGTACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCg                   <  2:328523/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATa     >  1:1589690/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              tACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATa     >  1:1764699/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                              tACGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATa     >  2:862324/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                                cGAAAAACGACA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAAcc  <  1:1430593/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
CAGGGAGGATTATAGATGGGAAGCCCGCGACAACGCGGGCTGAAAGCATCAGGATTGCAGCGTCGCCAGTCGGGCAGCGAAACCCACGAACATCAAACCAATCAGACTGTTGCCAACTTTAGCCAGTTTCTTTTTGGTACGTATGTACTGCGTGACAAAAGCACCAGATATAATCAGGAAGCTCAAATAGCAGAAACTCACCAGTTCCAGCGTCGCCGCCAGAATAAAGAAACTAATTCCCGTATGTGGGGCATTAACATCGATAAACTGTACGAAAAAGCTCA‑CATAGAACAAAATGGCTTTCGGATTAGTCAGGCTCAAAATTAACGCGCGTTTAAAAATAGCACCGTATTGGGGCTCATCGGATTTGGCCTCGCTATTTTTACCCTTCAGGGTCGCGTAAAGAATTTTACTCCCCAGATAGAGCAAATAAAACGCACCAAGATAACGTACAATGTTGAATAATATCGGGGTGGTCTTAATTAATGTCGCCACTCCAGCCCATGCCAGAAACATCAATACCGCATCGCCAATAAATACACCGCAGGCCGCAAGATAACC  >  CP042583/1560736‑1561296

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 25 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A