Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A4 F210 I1 R1
|
4930 |
262.8 |
3829204 |
96.6% |
3699011 |
272.9 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,593,153 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,593,153 | 0 | G | C | 99.5%
| 503.7
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (111/105); total (111/106) |
| Fisher's exact test for biased strand distribution p-value = 4.88e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,593,154 | 0 | C | G | 100.0%
| 506.9
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (111/106); total (111/106) |
| * | CP042583 | 1,593,155 | 0 | T | A | 100.0%
| 510.1
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base A (111/106); total (111/106) |
Only 100 of 217 total aligned reads displayed.
CGGTGCTGACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGGCTAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTGCTCTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGATAT > CP042583/1592873‑1593431
|||
cTGACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATc > 2:389049/1‑285 (MQ=255)
gACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAACGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTc < 1:1465479/289‑1 (MQ=255)
gACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTc < 1:1766129/289‑1 (MQ=255)
gACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTc < 1:162259/289‑1 (MQ=255)
cAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGACATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCGCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGc > 2:1817735/1‑288 (MQ=255)
ccAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAg > 1:1242137/1‑289 (MQ=255)
ccAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAg > 2:269451/1‑289 (MQ=255)
tCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGa > 1:609393/1‑289 (MQ=255)
gcggACCGGTTGAAAAAGCGGTGATGTGCGGCGCAGGGTAGAACGCAACGTGCGGCATAGCGATCCCCGCCTGACGAGGCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGa < 2:1099946/288‑1 (MQ=255)
gcgcACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGa > 1:1277304/1‑288 (MQ=255)
cACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTAcc > 1:1858619/1‑272 (MQ=255)
cACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTAcc < 2:1858619/272‑1 (MQ=255)
aCCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCAtt < 2:1271757/289‑1 (MQ=255)
gTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACg > 2:1892150/1‑288 (MQ=255)
aaaGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGt > 2:687576/1‑289 (MQ=255)
cGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGCCATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCAATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACAATCACGGCCAGGTCCGt > 2:1637265/1‑289 (MQ=255)
ggTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGAt > 1:1186831/1‑289 (MQ=255)
ggTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGAt > 2:811496/1‑289 (MQ=255)
cACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATAAGAAGCGAAACGAAGGAACCAACAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCCGGTTCGTTAGCAGTAAGAACGCGGTTCGcatacaa > 2:978042/1‑285 (MQ=255)
cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTACCAGGAAGAGCGCGACTCGCATCATAAt > 1:1002473/1‑289 (MQ=255)
ttccGGAATAGCGACCCCCGCCTGCCGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAAtt < 2:1674046/286‑1 (MQ=255)
cGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGcc < 2:86233/227‑1 (MQ=255)
gATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt < 1:389049/289‑1 (MQ=255)
catcgctcccTGCCGAGACTGGGATGCTACAGCATTGGCCCGGCACCGTTCCATTTCGTTACGCGGTTACTCCAACACTTGCCCGCCAACAGATCGTAAAGCCATCCATTTGTACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGAGTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTGCGGTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt < 2:538194/281‑1 (MQ=255)
tCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTc > 2:1326608/1‑288 (MQ=255)
ccTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAACCGAACATTACGGCCAGGTTCGCTAGCAGAAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGGTTa > 2:1559411/1‑288 (MQ=255)
ccTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACAATTACGGCCAGGGTCGTTAGCAGGAAGAGCGCGGTTAGCATCATAATTTTCTTTTTTCCTCAGTTTaa > 2:1708418/1‑289 (MQ=255)
gACGGGCCTGGGTTGCTTCAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACaa < 2:36221/289‑1 (MQ=255)
gACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACaa < 2:464339/289‑1 (MQ=255)
aCGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACaaa > 1:688076/1‑289 (MQ=255)
aCGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACaaa > 2:891993/1‑289 (MQ=255)
ccTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGc < 1:627437/288‑1 (MQ=255)
cTGGGTTGGTAAAGTATTGCCCCGACAACGTTCCCTTTCGTTACGCGTTTGCTCGATCACTTCCCCGCAAACAGATCGTAATGCCTTCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCa < 2:1775263/288‑1 (MQ=255)
tGGGGTGCTACAGTAGTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAat < 1:1287982/289‑1 (MQ=255)
cTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt < 2:989194/263‑1 (MQ=255)
tACAGTATTGACCCGCCAACGTTCCCTTTCGCTACGAGGTTGCTGGAACCCTTCCCCGGCAACAGATCGTAATGCAATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGCACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATa < 2:1225655/289‑1 (MQ=255)
aCAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAc < 1:1414851/289‑1 (MQ=255)
gTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCa < 1:1901323/275‑1 (MQ=255)
gTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAccc > 1:857674/1‑288 (MQ=255)
catacaccgaccAACTTTCACTTGCGTTAGGGAGTTGCTCGATTACTACCCCGCCAACAGACAGGAATGCCATCCATTTGGAAGTCAGAAGAGAAACGAAGGAACCACCACAACCGAACAGCACGGCCATGA‑TCAGCAGCCCCTGAACGCGGCTCGACTGTATCCCTGTCAGGATCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCAGCATAACTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCcac < 2:75355/279‑1 (MQ=255)
aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAccc < 1:1251095/286‑1 (MQ=255)
aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAcc < 1:475195/285‑1 (MQ=255)
aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCca < 1:426150/287‑1 (MQ=255)
aTTGACCAGCCAACCTTCCCTTTCGTTACGCGGTTGCTCGACAACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAccc < 1:1555858/286‑1 (MQ=255)
aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCCGTTTAACAAAACGCAAAATG‑CGAAACCCACATCGt > 2:1669234/1‑289 (MQ=255)
aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGt > 1:1016964/1‑289 (MQ=255)
aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGt > 2:912666/1‑289 (MQ=255)
aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGt > 1:1746300/1‑289 (MQ=255)
aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGt > 1:1345761/1‑289 (MQ=255)
ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGGACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAgg < 2:1378654/199‑1 (MQ=255)
ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCCGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGCAGAGCGCGAGTCGCATCATAATTTTCTTTTTACCTCAGTTTAAAAAAAAGCAATATG‑CGATACACACATCGTATggg > 2:501471/1‑289 (MQ=255)
ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAgg > 2:531177/1‑211 (MQ=255)
ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATggg > 1:1297479/1‑289 (MQ=255)
ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATggg > 1:468304/1‑289 (MQ=255)
gTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAAAGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTAc > 1:1811103/1‑288 (MQ=255)
cccTTTCGTGACGCTGTTGCTCGACAACTTCCCCGCAAGCAGATCGTAATGCCACCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGGCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGa < 2:450111/289‑1 (MQ=255)
gttaccgagTTGCTCGATCCCTTCCCCTCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACCAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt < 2:393216/281‑1 (MQ=255)
gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGCTCGTAATGCCATCCATTTAGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt < 1:156957/289‑1 (MQ=255)
gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt < 1:1554533/289‑1 (MQ=255)
gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACAACAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt < 2:1345761/289‑1 (MQ=255)
ttACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTc > 2:1647377/1‑289 (MQ=255)
tACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCa < 1:899336/289‑1 (MQ=255)
tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa < 1:113789/289‑1 (MQ=255)
tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa < 1:1647377/289‑1 (MQ=255)
tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATAAGAAGCGAAACGAAGGAACCAACAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa < 1:978042/289‑1 (MQ=255)
tCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATa < 2:1082433/288‑1 (MQ=255)
aCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt > 2:102058/1‑270 (MQ=255)
aCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTa > 1:1884603/1‑289 (MQ=255)
ccccGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTc < 1:1637265/289‑1 (MQ=255)
ccGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCAc < 2:284786/289‑1 (MQ=255)
ccGCAAACAGATCGTAATGACATCCATTTGGACATCAGAAGAGAAACGAAGGAACCACAAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCACGGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTGTCTTTTTACCTCAGTTTAACGAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCAc < 1:1047301/289‑1 (MQ=255)
aCAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGaaa > 1:169579/1‑289 (MQ=255)
tGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACttt < 1:1817735/289‑1 (MQ=255)
tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATTCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCcac > 2:1281544/1‑218 (MQ=255)
tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGcatca < 2:472758/168‑1 (MQ=255)
tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACAtt > 1:1721925/1‑289 (MQ=255)
tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACAtt > 1:135335/1‑289 (MQ=255)
tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACAtt > 1:141023/1‑289 (MQ=255)
ttGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCa > 2:1411674/1‑239 (MQ=255)
cATCAGAAGCGAAACGAAGGAACCACCAAACCCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCAt < 1:1675900/288‑1 (MQ=255)
cATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAAAAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCAt < 1:1500506/288‑1 (MQ=255)
tCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCAGCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTg > 2:1185456/1‑289 (MQ=255)
agcgaaaCGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTa < 1:1509743/284‑1 (MQ=255)
gaaacggaagcaccaccGAAACCGAACGGCAAGGCCATGA‑TCATCCACCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACg < 2:276992/277‑1 (MQ=255)
caAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTAtttt < 1:52898/206‑1 (MQ=255)
aCCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTaaaaa > 1:152969/1‑289 (MQ=255)
tggCCATGA‑CGATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCCGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACaa < 2:654553/288‑1 (MQ=255)
aGGCCATGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACaa < 1:218812/289‑1 (MQ=255)
tGA‑TCATCAGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATAcc > 2:765990/1‑157 (MQ=255)
catcaGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGc < 1:1715863/289‑1 (MQ=255)
tcaGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTtgtg > 1:729565/1‑286 (MQ=255)
tcaGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTtgtg > 1:657320/1‑286 (MQ=255)
caGCCCCTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtg > 1:247287/1‑289 (MQ=255)
cccTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtgat < 2:618080/287‑1 (MQ=255)
cccTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtgat < 2:1746300/287‑1 (MQ=255)
ccTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAAAATG‑CGATACCCACATCGTATGGGTTACGCGACTATTCTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtgattga > 2:214289/1‑289 (MQ=255)
cTGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtgattgat < 1:878128/289‑1 (MQ=255)
tGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAATGACCATTACGGCCAGGTTAGTTAGCAGGAAGAGCGCGTGTCGCATCATAATTTTCTTTTTACCTCCGTTTAACAAAACG‑AAAATGACGATAAGCACATCGGATGGGTTACGTGATTATTTTCCAGTCTGGATAGTGCGTAAGACACCAGGAAGACACAACTTTACACTATGTAACATCTGATTTAAGGCATTTGGTCGTCTTTCAAACATCAGGCACAATTTCTTTTTCCtgaatacta > 2:1152078/1‑283 (MQ=255)
tGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGata > 1:331770/1‑289 (MQ=255)
tGAACGCTGCTCGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGata > 1:913633/1‑289 (MQ=255)
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CGGTGCTGACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGGCTAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGA‑TCATCAGCCCCTGAACGCTGCTGCTCTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATG‑CGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGATAT > CP042583/1592873‑1593431
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
