Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,593,153 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,593,1530GC99.1% 532.3 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (117/112);  total (118/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,593,1540CG99.6% 534.6 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (116/113);  total (118/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,593,1550TA99.6% 536.1 / NA 231intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (116/113);  total (118/113)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 231 total aligned reads displayed.

CGGTGCTGACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGGCTAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑GCTCTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTA  >  CP042583/1592873‑1593433
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
cggtcgtGACAGCAACCAGCGGGGCAGCACGGCCGGAGCGGGTTGCAAAAGCGTTGAGGTCCGGCGAATGGTAAATAGCCACTTGCGTCATAGCCATCCCCGCCTGAGGAGCAGGGGTTGCTGCAGTATTGACCAGCCAACGTTCCCTTTCGTTACCCGGTTGGTGTATCACTCCCCCGCCAACAGATCGTAATGCCGTCCATTTGGACATCAGAAGCGAAACGAAGGAACCACGAAAACCGCACAGCAGGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTAt                                                                                                                                                                                                                                                                                  <  2:586105/283‑1 (MQ=255)
        aaaGCAACCGGGGAGGCATCACGGCGGGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTc                                                                                                                                                                                                                                                                           <  2:484937/286‑1 (MQ=255)
             aaCCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGTCATCAGAAGCGCAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCAGCACCCCCTGAACGCCTCT‑CGACTGTATCCCTGCCAGGccc                                                                                                                                                                                                                                                                     >  2:914144/1‑287 (MQ=255)
             aaCCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTc                                                                                                                                                                                                                                                                     >  1:654738/1‑289 (MQ=255)
                cAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCa                                                                                                                                                                                                                                                                          <  1:1057444/281‑1 (MQ=255)
                  gagagGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATAATCATCAGCCCCTGAACGCTGCT‑CCACTGTATCCCTGTCAGGCCCAgga                                                                                                                                                                                                                                                                 >  2:1198825/1‑286 (MQ=255)
                       gCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGc                                                                                                                                                                                                                                                            >  2:1434654/1‑288 (MQ=255)
                          tCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGa                                                                                                                                                                                                                                                        >  1:1763911/1‑289 (MQ=255)
                          tCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCC‑CGACTGTATCCCTTCCAGGCTCAGTAccctgtcc                                                                                                                                                                                                                                                         >  2:1057444/1‑282 (MQ=255)
                          tCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGACCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGGTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAGGCGAAACGAAGGAACCACCAAAACCGAACAGCAATGCCATGATCATCAGCTCCTGAACGCTTCTCGATC‑GTATCCCCGTTAGGTCCATTACCACCCCgc                                                                                                                                                                                                                                                        >  2:1886776/1‑288 (MQ=255)
                             cGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGCAACCCTGTCAGGCCCAGTACCAGCCCGaaaa                                                                                                                                                                                                                                                     >  2:308382/1‑289 (MQ=255)
                                              aaaaGCGTTGATGGCCGGGGAATGGTGGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAgg                                                                                                                                                                                                                                    <  2:1763911/289‑1 (MQ=255)
                                                aaGCGTTGATGTCCGGCGGAGTGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGtt                                                                                                                                                                                                                                  <  2:654738/289‑1 (MQ=255)
                                                  gCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGCCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAgtatcg                                                                                                                                                                                                                                >  2:1200949/1‑284 (MQ=255)
                                                    gttgttGTCCGGGCCAGGGTAGATAGCCACTGGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCGGCCACCGTTCCCTTTCGTTACGCGGTTGCTCGGTCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCg                                                                                                                                                                                                                                <  2:216243/287‑1 (MQ=255)
                                                    gTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGtt                                                                                                                                                                                                                              <  1:308382/289‑1 (MQ=255)
                                                                  cATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGCAAACGACCAGTACGGCCAGGTTCGTTAGAAGGAAGAgcgc                                                                                                                                                                                                                >  2:1525658/1‑289 (MQ=255)
                                                                  cATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAgcga                                                                                                                                                                                                                >  1:1834690/1‑288 (MQ=255)
                                                                             gCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTAc                                                                                                                                                                                                                                                                >  1:1337632/1‑230 (MQ=255)
                                                                                 cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGAc                                                                                                                                                                                                                                                 >  2:170538/1‑241 (MQ=255)
                                                                                 cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCg                                                                                                                                                                                                                                >  2:150370/1‑258 (MQ=255)
                                                                                 cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAAt                                                                                                                                                                                                 >  1:698138/1‑289 (MQ=255)
                                                                                 cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACC‑AAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAAtt                                                                                                                                                                                                >  1:973201/1‑289 (MQ=255)
                                                                                 cTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTACCCGCCAACAGATCGTAATGCCATCCATTAGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGAACATCAGCCCCTGAACGCTGCA‑CGACTGTATCCATGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGAGAGTCGAACCACAAt                                                                                                                                                                                                 >  2:1347283/1‑289 (MQ=255)
                                                                                   tGCGGCATAGCCATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAAttt                                                                                                                                                                                               <  1:1525658/289‑1 (MQ=255)
                                                                                              gATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    <  2:698138/289‑1 (MQ=255)
                                                                                              gATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    <  1:403077/289‑1 (MQ=255)
                                                                                              gATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    <  1:837445/289‑1 (MQ=255)
                                                                                               aTCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTc                                                                                                                                                                                   >  1:1682893/1‑289 (MQ=255)
                                                                                                   ccGACTGCCGAGCCTGGGTTGCTACAGTATTTACCAGCCAACATTCCCTTTCGCTACGCGGTTGCTAGATCACTTCCCCGCAAACAGATCGTAATGCCAGCGATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGGATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGtt                                                                                                                                                                               <  2:1466594/289‑1 (MQ=255)
                                                                                                              gCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACg                                                                                                                                                                     <  1:87791/288‑1 (MQ=255)
                                                                                                                cTGGGTTGCTACCGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCa                                                                                                                                                                   <  1:1938400/288‑1 (MQ=255)
                                                                                                                cTGGGTTGCTACAGTATTGACCAGCCAAAGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCa                                                                                                                                                                   <  2:873986/288‑1 (MQ=255)
                                                                                                                cTGGGTTGCGACATTCTGTACCAGCCAAAGTTCCCTTTCGTTACGCAGTTGCTCGATCACTTCACCGCCAACAGATCGTAATGCCATCAATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGAAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑GGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCa                                                                                                                                                                   <  2:1646042/288‑1 (MQ=255)
                                                                                                                 tGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAat                                                                                                                                                                 >  2:921915/1‑289 (MQ=255)
                                                                                                                       gCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGa                                                                                                                                                           <  1:1663978/289‑1 (MQ=255)
                                                                                                                        ctccAGTATTGACCAGCCAACGTTCCCTTGCGTTACGCGGTTGCTCGATCCCTTACCCGCCAACAGATCGTAATGCCATCCACTTGGACATCAGAAGGGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGAGCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGACCGAAAACGACCATTACGGACAGGTTCGCTAACAGGCAGAACGCGAATCGCAACCACATCTACCTTTTAACTCAGTTTCACAAAACGCAatacaacat                                                                                                                                                          >  2:1962265/4‑283 (MQ=255)
                                                                                                                        cTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGAt                                                                                                                                                          >  1:161750/1‑289 (MQ=255)
                                                                                                                        cTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGAt                                                                                                                                                          >  2:1851700/1‑289 (MQ=255)
                                                                                                                        cTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGAt                                                                                                                                                          >  2:403314/1‑289 (MQ=255)
                                                                                                                             gTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCAGAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGAAAccc                                                                                                                                                      >  1:49846/1‑288 (MQ=255)
                                                                                                                              aattacccacccacCGTTCCCTTTCCTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcac                                                                                                                                                    <  2:1682893/283‑1 (MQ=255)
                                                                                                                               aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATAccc                                                                                                                                                      <  1:713534/286‑1 (MQ=255)
                                                                                                                               aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcaca                                                                                                                                                   <  1:452951/289‑1 (MQ=255)
                                                                                                                               aTTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcaca                                                                                                                                                   <  1:1655603/289‑1 (MQ=255)
                                                                                                                               aTTGACAAGCCAACGTTCCCGTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcaca                                                                                                                                                   <  1:1290856/289‑1 (MQ=255)
                                                                                                                                  gACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACTAGCCCGAAAACGACCACTACAGCACGGTTCGTTAGCAGGAAGAGGGCGATGTGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCAAATCg                                                                                                                                                >  1:1746846/1‑289 (MQ=255)
                                                                                                                                   aCCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGt                                                                                                                                               >  2:1640933/1‑289 (MQ=255)
                                                                                                                                        ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGTCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGAAATATGCGATACCAACCTCGTATggg                                                                                                                                          >  2:1536119/1‑289 (MQ=255)
                                                                                                                                        ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    >  2:33431/1‑247 (MQ=255)
                                                                                                                                        ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    <  1:33431/247‑1 (MQ=255)
                                                                                                                                        ccAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATggg                                                                                                                                          >  1:1907379/1‑289 (MQ=255)
                                                                                                                                          aaCGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcac                                                                                                                                                    >  2:1597617/1‑277 (MQ=255)
                                                                                                                                                cccTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGa                                                                                                                                  <  1:1463334/289‑1 (MQ=255)
                                                                                                                                                cccTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGa                                                                                                                                  <  1:1085881/289‑1 (MQ=255)
                                                                                                                                                 acattCGTTAGGCCGTTGCCCGATCACTTCCCCGCCACACGATCGTCATGCCAGCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCTAGGCCATGATCATCAGCCCCTGGACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGa                                                                                                                                  <  2:1361408/285‑1 (MQ=255)
                                                                                                                                                       gTTACGCGGTTGCTCGATCACTTCCCCGCCCACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           <  1:212432/289‑1 (MQ=255)
                                                                                                                                                       gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           <  2:452268/289‑1 (MQ=255)
                                                                                                                                                       gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           <  1:598661/289‑1 (MQ=255)
                                                                                                                                                       gTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCAATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           <  1:914144/289‑1 (MQ=255)
                                                                                                                                                            gcgGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTAGCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGt                                                                                                                      <  2:1941443/289‑1 (MQ=255)
                                                                                                                                                                ttGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCaa                                                                                                                        >  1:1361408/1‑283 (MQ=255)
                                                                                                                                                                ttGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTgg                                                                                                                  >  2:599036/1‑289 (MQ=255)
                                                                                                                                                                 tacTCGATCACTACCCCGCCAACAGATCGTAATCCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  2:847412/287‑1 (MQ=255)
                                                                                                                                                                 tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  1:1851700/289‑1 (MQ=255)
                                                                                                                                                                 tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 >  1:1583960/1‑289 (MQ=255)
                                                                                                                                                                 tGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  1:1539191/289‑1 (MQ=255)
                                                                                                                                                                 tGCTCGATCACTTCCCCGCAAACGAATCCTAATGCCATCAATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  2:580301/289‑1 (MQ=255)
                                                                                                                                                                   cTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATa                                                                                                               <  1:1328360/289‑1 (MQ=255)
                                                                                                                                                                          aCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           >  1:407324/1‑270 (MQ=255)
                                                                                                                                                                          aCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTAtttt                                                                                                                           >  1:91845/1‑270 (MQ=255)
                                                                                                                                                                          aCTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  2:622120/280‑1 (MQ=255)
                                                                                                                                                                                  gCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACC‑AAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAg                                                                                               <  2:973201/289‑1 (MQ=255)
                                                                                                                                                                                          aTCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGaca                                                                                        >  2:1017464/1‑289 (MQ=255)
                                                                                                                                                                                           tCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGaca                                                                                        <  1:924680/288‑1 (MQ=255)
                                                                                                                                                                                           tCGTAATGCCATCCATTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTAAGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGaca                                                                                        <  1:1632433/288‑1 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTc                                                                                                                                                                                                                                                                           <  1:1199810/98‑1 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTc                                                                                                                                                                                                                                                                           >  2:753912/1‑98 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTc                                                                                                                                                                                                                                                                           <  1:753912/98‑1 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    <  1:1102811/185‑1 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCt                                                                                                                                                                                    >  2:1102811/1‑185 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  2:543752/252‑1 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCCCCAGAAAGACACAACTTTACAtt                                                                            >  2:716305/1‑289 (MQ=255)
                                                                                                                                                                                                      tccatTTGGACATCAGAAGCGAAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGaca                                                                                        <  1:956052/277‑1 (MQ=255)
                                                                                                                                                                                                                   cagaagcgaaaCGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTAcg                                                                                                                                     <  1:58109/210‑1 (MQ=255)
                                                                                                                                                                                                                       agcgaaaCGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTa                                                           <  1:273410/284‑1 (MQ=255)
                                                                                                                                                                                                                           aaaCGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATa                                                                                                               >  1:527750/2‑233 (MQ=255)
                                                                                                                                                                                                                           aaaCGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGc                                                       >  1:1433449/2‑289 (MQ=255)
                                                                                                                                                                                                                                         ccaAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 <  2:556311/217‑1 (MQ=255)
                                                                                                                                                                                                                                         ccaAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGa                                                                                                                 >  1:556311/1‑217 (MQ=255)
                                                                                                                                                                                                                                          caAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATAACCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTa                                        >  2:501046/1‑289 (MQ=255)
                                                                                                                                                                                                                                             aaCCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCAt                                                                   <  1:1256150/259‑1 (MQ=255)
                                                                                                                                                                                                                                              aCCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTGCGTTAGCAGGAAGAGCGCGGTTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAACATGCGATACCCACAGCGTTCGGTGTACGCCACTCTTTTCAATTCGGGATAGGTCGTAAGTCACCAGAAGTACACAACTTTACATGTTTTAGCTTCTGGTTTACGGCATCTTGCCGCTGTTaaaaa                                    >  2:1447717/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGcac                           >  1:540608/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cATGATCATCAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTc                     <  1:1017464/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                 atcatcAGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAg                                                                                               <  1:986016/211‑1 (MQ=255)
                                                                                                                                                                                                                                                                      caGCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtg            >  2:1089374/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        gCCCCTGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCtgat          <  2:1843987/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tGAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCcac                                                                                                                                                    >  2:248471/1‑146 (MQ=255)
                                                                                                                                                                                                                                                                              gAACGCTGCT‑CGACTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGatat    >  2:967193/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                      
CGGTGCTGACAGCAACCAGAGAGGCATCACGGCGCGCACCGGTTGCAAAAGCGTTGATGTCCGGCGCATGGTAGATAGCCACTTGCGGCATAGCGATCCCCGCCTGACGAGCCTGGGTTGCTACAGTATTGACCAGCCAACGTTCCCTTTCGTTACGCGGTTGCTCGATCACTTCCCCGCCAACAGATCGTAATGCCATCCATTTGGACATCAGAAGGCTAACGAAGGAACCACCAAAACCGAACAGCAAGGCCATGATCATCAGCCCCTGAACGCTGCT‑GCTCTGTATCCCTGTCAGGCTCAGTACCAGCCCGAAAACGACCATTACGGCCAGGTTCGTTAGCAGGAAGAGCGCGATTCGCATCATAATTTTCTTTTTACCTCAGTTTAACAAAACGCAATATGCGATACCCACATCGTATGGGTTACGCGACTATTTTCAAGTCTGGATAGTGCGTAAGTCACCAGAAAGACACAACTTTACATTTTGTAGCATCTGATTTACGGCATCTTGTCGCTGTTAAAAAATCAGGCACAATTTCTTGTGCCTGATTGATATTA  >  CP042583/1592873‑1593433

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A