Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,602,313 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,602,3130AT99.6% 562.6 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/0);  new base T (145/92);  total (146/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,602,3140GC97.9% 548.4 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  major base C (143/90);  minor base A (2/3);  total (146/93)
Fisher's exact test for biased strand distribution p-value = 3.82e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,602,3150CG97.9% 541.0 / NA 239intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (3/2);  new base G (142/90);  total (146/93)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 239 total aligned reads displayed.

TGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCAGTCCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTA  >  CP042583/1602034‑1602592
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
 ggTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGaa                                                                                                                                                                                                                                                                               <  2:1695774/289‑1 (MQ=255)
     gttCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGGGATTGAAAAAc                                                                                                                                                                                                                                                                           >  1:1354110/1‑289 (MQ=255)
     gttCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAAc                                                                                                                                                                                                                                                                           >  1:384845/1‑289 (MQ=255)
          cGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      >  1:1787588/1‑289 (MQ=255)
          cGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      >  2:438546/1‑289 (MQ=255)
          cGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      <  1:860337/289‑1 (MQ=255)
          cGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      <  2:582525/289‑1 (MQ=255)
          cGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      <  1:438546/289‑1 (MQ=255)
                  aTTGAAGCCCTGATCGGTAAAGTCCGTTTTTCTCGGTTGGGGATTAAACTTGCCGAGACGAACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACACGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTg                                                                                                                                                                                                                                                              <  1:1102368/289‑1 (MQ=255)
                    tGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGaa                                                                                                                                                                                                                                                            <  1:1380736/289‑1 (MQ=255)
                                            aTTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACttttt                                                                                                                                                                                                                                    >  1:171229/1‑289 (MQ=255)
                                                 tgcgtgtGGGGATTAACCTTGCCGGGACGAACAACAAAGGTTGTCGCGGGCAGAATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGCCACCGCAGGAAGCGGAGGAGTGGTTTCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCgg                                                                                                                                                                                                                               <  2:1787588/283‑1 (MQ=255)
                                                  tcGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGt                                                                                                                                                                                                                              <  1:929245/289‑1 (MQ=255)
                                                   cGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  1:1463110/289‑1 (MQ=255)
                                                   cGGTTGGGAATTAAACGTGCCGAGACGCACAACAAAGGTTATCGCGGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  2:298080/289‑1 (MQ=255)
                                                                                         ttATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTg                                                                                                                                                                                          >  1:318032/1‑286 (MQ=255)
                                                                                          tatgccTGGAAGCAGGAACCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTg                                                                                                                                                                                      <  2:1566560/284‑1 (MQ=255)
                                                                                           aTCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCCCAACAAAAGCGCCCTTTTTGACTg                                                                                                                                                                                      >  2:340863/1‑288 (MQ=255)
                                                                                           aTCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTg                                                                                                                                                                                      >  1:203630/1‑288 (MQ=255)
                                                                                             cGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGc                                                                                                                                                                                    >  1:344167/1‑288 (MQ=255)
                                                                                                  gcagcaTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTc                                                                                                                                                                              >  2:1512334/1‑289 (MQ=255)
                                                                                                      caTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCg                                                                                                                                                                             >  2:494063/1‑286 (MQ=255)
                                                                                                       ctgcagatgTTATTGCTCTTGCCCCACCCGATAATATCAAGCCATGCGAGCTGACACCGCAGGGAGCGGTGGGGGGGTATCGCTGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  2:725374/278‑1 (MQ=255)
                                                                                                       aTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  1:226692/286‑1 (MQ=255)
                                                                                                        tGAGGCGGTTTATGTTCGTGCCTTACCAGATAATAGTAATGCCTTCGAGCTGACACCGGCGGAAGCGGAGGAGTGGTATGGCGGGCGCTATGTTTACCCGCAAGCCGCGCCAGTTGCGGATGATGTATTGGTTACTTGCCAGCATCAACCGATTGGTTTAGCCAAACGGAGTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGc                                                                                                                                                                        <  2:1474294/289‑1 (MQ=255)
                                                                                                                  aTTGCTGTTGACACACCAGATAATATGAAGGCATGCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGAATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAgg                                                                                                                                                              <  2:1534579/289‑1 (MQ=255)
                                                                                                                  aTTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTCACTGGCACCTTCGGTCGCCTACACTAgg                                                                                                                                                              >  2:1659828/1‑289 (MQ=255)
                                                                                                                          tgcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCgg                                                                                                                                                                                                                               >  2:1099535/8‑216 (MQ=255)
                                                                                                                          tgcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTAGGCTGCCTCAACCAGGCAGaaaaa                                                                                                                                                      >  2:184554/8‑289 (MQ=255)
                                                                                                                          tgcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGAACATTCGGCTGCCTCAACTAGGCTTaaaaa                                                                                                                                                      >  2:635296/8‑289 (MQ=255)
                                                                                                                           gcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGGTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCGATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACACAAAAAGCGCACTTTTTGACTGGCACATTCGCCTGCCTCACCTAGGcgcaaa                                                                                                                                                        >  2:1907863/7‑281 (MQ=255)
                                                                                                                                acccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             >  1:681374/2‑212 (MQ=255)
                                                                                                                                acccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGc                                                                                                                                                >  1:1829039/2‑289 (MQ=255)
                                                                                                                                acccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATACGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTTACTGGCACATTCGGCTGTCTCAACTAGGCTGAAAACTGGTGc                                                                                                                                                >  2:142090/2‑289 (MQ=255)
                                                                                                                                     ataataTGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCCGAAAAATGGTGCGATCg                                                                                                                                           >  2:1341193/1‑289 (MQ=255)
                                                                                                                                      taataTGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGAATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCTCGATGGGAAACTTTTTAGCTGGAACGCCTGACGGCGCACAAAAAAAGGCAACTTTTTGACGGGCACCATCGGCTGCCGCAACCACGCAGAAAAATGGTGCCATCgg                                                                                                                                          >  2:812919/1‑289 (MQ=255)
                                                                                                                                        atatGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGAc                                                                                                                                        <  1:1544983/289‑1 (MQ=255)
                                                                                                                                        atatGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGAc                                                                                                                                        <  2:345304/289‑1 (MQ=255)
                                                                                                                                         tatGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATATTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACt                                                                                                                                       <  2:626546/289‑1 (MQ=255)
                                                                                                                                          atGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTg                                                                                                                                      >  1:650936/1‑289 (MQ=255)
                                                                                                                                            gAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGt                                                                                                                                    <  1:329199/289‑1 (MQ=255)
                                                                                                                                             aaTGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCgg                                                                                                                                                                                                                               <  2:1315872/197‑1 (MQ=255)
                                                                                                                                             aaTGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCgg                                                                                                                                                                                                                               >  1:1315872/1‑197 (MQ=255)
                                                                                                                                                  aTTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTa                                                                                                                                                                                                                                   <  2:1754798/188‑1 (MQ=255)
                                                                                                                                                   ttCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCGCAACTAGGCCGAAAAATGGTGCAATCGGACTGGGCGTAcc                                                                                                                              >  2:1744314/1‑288 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAAc                                                                                                                                                                  <  1:1295291/243‑1 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAAc                                                                                                                                                                  >  2:1295291/1‑243 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGAt                                                                                                                                             >  1:1514913/1‑264 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCa                                                                                                                    >  2:947350/1‑289 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCa                                                                                                                    >  1:1814417/1‑289 (MQ=255)
                                                                                                                                                             gacCGCAGGAAGCGGAGGAGTGGTATAGCGGATGCGATGTTGACCCGCAAGCCGCTCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCa                                                                                                                    <  2:318032/287‑1 (MQ=255)
                                                                                                                                                                  cAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTaaa                                                                                                              >  1:1268267/1‑289 (MQ=255)
                                                                                                                                                                  cAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTaaa                                                                                                              >  1:76391/1‑289 (MQ=255)
                                                                                                                                                                  cAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTaaa                                                                                                              >  1:1846080/1‑289 (MQ=255)
                                                                                                                                                                       aGCGGAGTGGTGGTATCGCGGGCGCGATGTTTACCCGCCAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCATCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGga                                                                                                          <  1:1590319/288‑1 (MQ=255)
                                                                                                                                                                          ggaggaGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGagag                                                                                                       <  1:1368120/288‑1 (MQ=255)
                                                                                                                                                                                   gTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGAt                                                                                              <  1:472463/288‑1 (MQ=255)
                                                                                                                                                                                        gcgGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAAc                                                                                        <  1:1078147/289‑1 (MQ=255)
                                                                                                                                                                                         cgGGCGCGATGTTTACCCGCTAACCGCTCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGGAAAACAGCTATCTGCGTGAACTGGTTCGCGATGGGAAACTTTTTACCGGTAACGCCAGACAGCGCACAAAAGAAGCGGACTTGTTGACTGGCACCTTCGGCTGCCTCAACTAGGCTGAAAACAGGTGCTAGCGGAGTGGGCGTAACAAAATGGGCAGCTAAATGGACAGCACGAAGATGaaaaac                                                                                       >  2:862701/1‑287 (MQ=255)
                                                                                                                                                                                          gggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGGAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGa                                                                                                                                                                                         >  1:1669362/1‑190 (MQ=255)
                                                                                                                                                                                          gggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGGAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGa                                                                                                                                                                                         <  2:1669362/190‑1 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCCGCTGCCTCAACTAGGCTGAAAAATGGTTCGATCGGACTGGTCGTACCACAATCGGCACCTAAATGGAGAGCACGCAGAGAAAAACCAg                                                                                     >  2:1322168/1‑289 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGAGGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGGGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACACAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGATGAAAAATGGTGCGATCGGACTGGTCGTACCCCAATCGTCAGCTAAATGGAGAGCAGGAAGATGAAAACCAg                                                                                     >  2:506907/1‑289 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAgtg                                                                                   >  1:1048095/1‑289 (MQ=255)
                                                                                                                                                                                                    tttACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCAt                                                                            >  1:941191/1‑289 (MQ=255)
                                                                                                                                                                                                        cccGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGTACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCAATGAGATGACAACCAGTTGTCGCATAGgc                                                                        >  2:598631/1‑289 (MQ=255)
                                                                                                                                                                                                            cAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCCCAAACGGCAGCTAAATGGAGAGACCGAAGGTGAAAACCAGGGTGCGCATAGGCTCtt                                                                    >  2:1039885/1‑289 (MQ=255)
                                                                                                                                                                                                            cAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCtt                                                                    >  2:760807/1‑289 (MQ=255)
                                                                                                                                                                                                                ccGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAgcg                                                                                                                                                                                                                >  2:535371/1‑145 (MQ=255)
                                                                                                                                                                                                                ccGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAgcg                                                                                                                                                                                                                <  1:535371/145‑1 (MQ=255)
                                                                                                                                                                                                                   cgcCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGaaa                                                              >  2:1854451/1‑288 (MQ=255)
                                                                                                                                                                                                                         tGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATcgacg                                                        >  2:1076301/1‑288 (MQ=255)
                                                                                                                                                                                                                            cGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCGATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGacgacg                                                     <  2:413293/288‑1 (MQ=255)
                                                                                                                                                                                                                                tgatgTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGaa                                                >  1:502027/1‑289 (MQ=255)
                                                                                                                                                                                                                                tgatgTATTGGTTACTTTCCAGCATCAACCGAGTGGTTTAGCCAAACGGATTGGTTCTCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTTCGATCGGACTGGTCGGACCACAAACTTCTGCTAAGTGGAGAGCACGCAGGTAAAACCCAGGTTTCTCATAGGCTCTTTTaaaagcttggacgtggag                                                >  2:1383076/1‑275 (MQ=255)
                                                                                                                                                                                                                                     tATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTac                                            >  1:598862/1‑288 (MQ=255)
                                                                                                                                                                                                                                      aTTGGTGACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAATCAGCGATCCGGGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTacac                                          <  2:806257/289‑1 (MQ=255)
                                                                                                                                                                                                                                         ggTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGt                                       >  1:1645193/1‑289 (MQ=255)
                                                                                                                                                                                                                                          gTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTGTGAAATCGACGACGGCGAATTACACGGTg                                      >  1:279241/1‑289 (MQ=255)
                                                                                                                                                                                                                                          gTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGAGGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTg                                      >  2:956367/1‑289 (MQ=255)
                                                                                                                                                                                                                                             aCTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTacac                                          <  1:372909/282‑1 (MQ=255)
                                                                                                                                                                                                                                             aCTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaat                                   <  1:810025/289‑2 (MQ=255)
                                                                                                                                                                                                                                                 tCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgcc                               <  1:494063/289‑6 (MQ=255)
                                                                                                                                                                                                                                                    aacATCAACCGATTGGTTTAGCCAAAAGGATTGGTTCGCGATTGAAAAACATCTATCCGCTTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgccagg                            <  1:1005851/287‑9 (MQ=255)
                                                                                                                                                                                                                                                    aGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTg                                                                                                                                                                                                                                                              <  1:911634/63‑1 (MQ=255)
                                                                                                                                                                                                                                                    aGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgccagg                            >  1:796227/1‑281 (MQ=255)
                                                                                                                                                                                                                                                    aGCATCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgccagg                            >  2:1225170/1‑281 (MQ=255)
                                                                                                                                                                                                                                                        tCAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGAt                        <  2:565308/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         cAACCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATc                       <  1:142090/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  2:1127813/138‑1 (MQ=255)
                                                                                                                                                                                                                                                           aCCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCCTCGGCGCTTTTCAAATCGACGACGGCCGATTACCAGGTGAATGGCCAGGTGATCGa                     >  2:1167166/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           aCCGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGa                     >  2:1397574/1‑289 (MQ=255)
                                                                                                                                                                                                                                                             cgtttGGTTTAGCCAAACGGGTTGGTGACGGTTTAAAAAACAGCTCTCCGCGTGAGCGGGTGCGGGTTGGGAACCGTTTTACCGGTAACGCCTTACAGCGAACAAGAAAAGCTCACTATTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAAc                   <  2:243369/286‑1 (MQ=255)
                                                                                                                                                                                                                                                             cGATTGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAAc                   <  1:1106871/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                ttGGTTTAGCCAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTCACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGtt                >  1:973627/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          cAAACGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTcc       <  1:1856485/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                             aCGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGt   >  1:161201/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             aCGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGt   >  1:1179402/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              cGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGTa  >  1:563022/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              cGGATTGGTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAAACAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCAAGGTGATGGAACGTTAACCATGCCTTGTa  >  2:1356018/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                     
TGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCAGTCCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCAGCATCAACCGATTGGTTTAGCCAAACGGATTGGTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTA  >  CP042583/1602034‑1602592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A