Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,602,313 3 bp→TCG intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,602,3130AT99.7% 714.4 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (168/132);  minor base C (1/0);  total (169/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01
*CP0425831,602,3140GC99.3% 701.3 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (167/129);  total (169/132)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,602,3150CG99.7% 706.7 / NA 301intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (168/131);  minor base A (0/1);  total (169/132)
Fisher's exact test for biased strand distribution p-value = 4.40e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 301 total aligned reads displayed.

TGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCAGTCCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTA  >  CP042583/1602034‑1602592
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
                gCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCcgc                                                                                                                                                                                                                                                                 <  1:392977/288‑1 (MQ=255)
                   ttGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGa                                                                                                                                                                                                                                                             >  1:2685923/1‑289 (MQ=255)
                    tGAAGCCCTAATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGaa                                                                                                                                                                                                                                                            <  1:43042/289‑1 (MQ=255)
                              aTCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTgcgtg                                                                                                                                                                                                                                                  >  1:66955/1‑287 (MQ=255)
                                        tCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACt                                                                                                                                                                                                                                        >  1:791259/1‑289 (MQ=255)
                                           gATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACtttt                                                                                                                                                                                                                                     >  1:1844120/1‑289 (MQ=255)
                                            aTTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGGTGATGTATTGGTTACTTT‑CCAGCACCAACCGATTGGTTTAGCCAAACCGATTG‑GTTCGCGTTTGAAAAACCGCTTTCCGCGGTACATTGTGCGGGATGGGAAACttttt                                                                                                                                                                                                                                    >  2:1485364/1‑289 (MQ=255)
                                             ttttCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTa                                                                                                                                                                                                                                   <  1:1557826/289‑1 (MQ=255)
                                                 ctcGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCgg                                                                                                                                                                                                                               <  2:1559690/289‑1 (MQ=255)
                                                  tcGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      <  1:1068945/249‑1 (MQ=255)
                                                  tcGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGt                                                                                                                                                                                                                              >  2:682973/1‑289 (MQ=255)
                                                   cGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  2:853464/289‑1 (MQ=255)
                                                    ggTTGCGGATTAAACTTGCCGGGACGCACAACAAAGGTTAGCGAGGGCAGCATGAAGCGGTTTTTGCTCTTGACTCACCCGATAATATGAATGCCTTCGAGCTGAACCCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  2:1064762/288‑1 (MQ=255)
                                                                aaCTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTGTGTCG‑CGATTGAAAAACACCCATCCGCGTGACCTGGTGCGCTATCGGTAACTTTTTACCGGTACCGCCTGACAgc                                                                                                                                                                                                                 >  2:1930586/1‑288 (MQ=255)
                                                                aaCTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAgc                                                                                                                                                                                                                 >  1:488360/1‑288 (MQ=255)
                                                                     gCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACaa                                                                                                                                                                                                           >  1:2086282/1‑289 (MQ=255)
                                                                     gCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTAGCCGCGGGAACTGGTGCGCGATGGGAAACTTTTTGCCGGTACAGCCTGAACGCGCACaa                                                                                                                                                                                                           >  2:2554488/1‑289 (MQ=255)
                                                                        gggaagaacaacaAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACaaaaa                                                                                                                                                                                                        <  2:791259/282‑1 (MQ=255)
                                                                             gCAAAACAAAGGTTATAGCTGGCAGGATGAAGCAGTGATTGCTCTTGCCTCACCCGAGAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGGATTGGTTACTGT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAgcg                                                                                                                                                                                                   <  2:1796371/289‑1 (MQ=255)
                                                                                caacaaAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      <  2:1113944/219‑1 (MQ=255)
                                                                                caacaaAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTa                                                                                                                                                                                                                                                                      >  1:1113944/1‑219 (MQ=255)
                                                                                           aTCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGCCTg                                                                                                                                                                                      >  1:140288/1‑288 (MQ=255)
                                                                                             cGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             >  2:1892516/1‑247 (MQ=255)
                                                                                             cGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  1:1892516/247‑1 (MQ=255)
                                                                                                  gcagcaTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTc                                                                                                                                                                              >  1:2572808/1‑289 (MQ=255)
                                                                                                  gcagcaTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTc                                                                                                                                                                              >  1:625481/1‑289 (MQ=255)
                                                                                                    ggaattaaGCGGTTATTGCTCTTGCCTCACCAGATAATGTGAAGGCATTCGAGCTGACACCGCGGGAAGCGGAGGAGTGGTATCGCGGGCGCGTTGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCg                                                                                                                                                                             <  2:1943534/282‑1 (MQ=255)
                                                                                                       aTGAAGCGGTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  2:1844120/286‑1 (MQ=255)
                                                                                                              ggTTATTGCTCTTGCCTCACCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCaa                                                                                                                                                                   <  1:682973/288‑1 (MQ=255)
                                                                                                                          tgcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGaaa                                                                                                                                                                                                                                                                              <  2:531878/162‑1 (MQ=255)
                                                                                                                           gcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            >  2:2607084/7‑266 (MQ=255)
                                                                                                                           gcctcacccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACCAGGCTGAAAAAt                                                                                                                                                     >  1:1661981/7‑289 (MQ=255)
                                                                                                                                acccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTa                                                                                                                                                                                                                             <  1:869398/211‑1 (MQ=255)
                                                                                                                                acccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGc                                                                                                                                                >  1:724359/2‑289 (MQ=255)
                                                                                                                                  ccGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGa                                                                                                                                              <  1:33113/289‑1 (MQ=255)
                                                                                                                                     ataataTGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCg                                                                                                                                           >  1:1048677/1‑289 (MQ=255)
                                                                                                                                       aataTGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGa                                                                                                                                         <  1:220830/289‑1 (MQ=255)
                                                                                                                                         aatGAAGGCAGTCGGGCTGGCACCGCCGGAAGCGGAGGATTGGTATCGCGGGCGCTATGTTTACCCGCAAACCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGa                                                                                                                                         <  2:171054/286‑1 (MQ=255)
                                                                                                                                              aTGCATTCGAGCTGACCCCGCAGGAAGCGGAGGGGTGGTATTGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTTCCCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCACACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGt                                                                                                                                    <  2:2395383/288‑1 (MQ=255)
                                                                                                                                               tGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTg                                                                                                                                                 >  2:1339367/1‑273 (MQ=255)
                                                                                                                                                   ttCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTAt                                                                                                                                                                                                                                                                     <  2:486380/153‑1 (MQ=255)
                                                                                                                                                   ttCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            >  1:1954046/1‑242 (MQ=255)
                                                                                                                                                   ttCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCACAACTAGGCTGAAAAATGGTTCGATCGGACTGGTCGTAcc                                                                                                                              >  2:891934/1‑288 (MQ=255)
                                                                                                                                                   ttCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTCGGGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACCTTCCGCTGCCTCTACGAGGCCGAAAAATGGTGCGATCGGACTGGTctcacc                                                                                                                              >  2:1698211/1‑283 (MQ=255)
                                                                                                                                                    tCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTg                                                                                                                                                           >  2:2603736/1‑258 (MQ=255)
                                                                                                                                                            acacCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACCTTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCCACATCGGCa                                                                                                                    >  2:1396442/1‑289 (MQ=255)
                                                                                                                                                                        gCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGgaga                                                                                                        >  1:2318780/1‑289 (MQ=255)
                                                                                                                                                                              gggTGGTATCGGGGGCGAGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACg                                                                                                   <  1:2438320/286‑1 (MQ=255)
                                                                                                                                                                                 tGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGCCTGGCACATTCGGCTGCCTCAACTAGGCTGAAAACTGGGGCGATCGGACTGGTCGTACCACAATCGGCAGCGAAATGCAGAGCACGCAGa                                                                                               >  2:2645207/1‑289 (MQ=255)
                                                                                                                                                                                 gggTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAg                                                                                                <  1:902338/287‑1 (MQ=255)
                                                                                                                                                                                   gTATCGCGGGCGCGATTTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCg                                                                                                                                           <  1:19149/243‑1 (MQ=255)
                                                                                                                                                                                      tCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAgcg                                                                                                                                                                                                                >  1:942791/1‑171 (MQ=255)
                                                                                                                                                                                        gcgGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGaaaa                                                                                         >  1:1820862/1‑288 (MQ=255)
                                                                                                                                                                                         cgGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACg                                                                                                                                                                                                                          >  2:644848/1‑158 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGACAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAg                                                                                     >  1:1287822/1‑289 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTTACTGGCACATTCGGCTGCCCCAACTAGGCTGAAAAATGGTTCGATCCGACTGGTCGttc                                                                                                                               >  2:2700612/1‑245 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  1:2519676/202‑1 (MQ=255)
                                                                                                                                                                                           ggCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            >  2:2519676/1‑202 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCaa                                                                                                                                                                   <  2:368305/209‑1 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCaa                                                                                                                                                                   >  1:368305/1‑209 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAAcc                                                                                       >  1:1995643/1‑285 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAAcc                                                                                       <  2:1995643/285‑1 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAgt                                                                                    <  1:1345910/288‑1 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGAACGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAgtg                                                                                   >  1:1120264/1‑289 (MQ=255)
                                                                                                                                                                                             cgcgATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTAGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAgtg                                                                                   >  2:2150846/1‑289 (MQ=255)
                                                                                                                                                                                                      tACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATgg                                                                                                                                                   >  2:2071440/1‑216 (MQ=255)
                                                                                                                                                                                                              aGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCa                                                                                                                    >  1:1970858/1‑239 (MQ=255)
                                                                                                                                                                                                              aGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCa                                                                                                                    <  2:1970858/239‑1 (MQ=255)
                                                                                                                                                                                                                          ggCGGATGAGGAATTGGTTACTTT‑CCAGCATCAACAGATTGGTTTAGCCAAACGAGTTG‑GTTCGCGATTGAAAAACAGCTATCGGCGTGAACTGGGGCGCGATGGGAAACTTGTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATGCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAAGCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATcgacga                                                       <  2:2429108/288‑1 (MQ=255)
                                                                                                                                                                                                                              gatgatGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCg                                                  >  2:1435219/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTac                                            >  1:452346/1‑288 (MQ=255)
                                                                                                                                                                                                                                     tATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTac                                            >  1:650378/1‑288 (MQ=255)
                                                                                                                                                                                                                                      aTTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTacac                                          >  1:271804/1‑289 (MQ=255)
                                                                                                                                                                                                                                         ggTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAAGGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGAAGAAGGCGAATTaaaaggg                                       >  2:39027/1‑283 (MQ=255)
                                                                                                                                                                                                                                             aCTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGacgacg                                                     >  1:2396923/1‑271 (MQ=255)
                                                                                                                                                                                                                                               ttt‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCgg                                                                                                                                                                            <  2:407965/150‑1 (MQ=255)
                                                                                                                                                                                                                                               ttt‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatc                                  >  2:1172945/1‑286 (MQ=255)
                                                                                                                                                                                                                                               ttt‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatc                                  >  2:1647071/1‑286 (MQ=255)
                                                                                                                                                                                                                                                 t‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgcc                               <  1:571117/289‑6 (MQ=255)
                                                                                                                                                                                                                                                    cAGAATCAACTGATTGTTTTAGACAAACGGAGTG‑GTTGGCGATTGAAAACCAGATGACCGCGTGAACTGGTGGGCGATGGGAAACTTTTTACCGATAACGCCTGACAACGCACAAAAAAAGCGAACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGaatcgccag                             <  2:2574318/289‑8 (MQ=255)
                                                                                                                                                                                                                                                     aGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAgcg                                                                                                                                                                                                                >  1:2625448/1‑109 (MQ=255)
                                                                                                                                                                                                                                                     aGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACt                                                                                                                                       >  2:1292756/1‑182 (MQ=255)
                                                                                                                                                                                                                                                     aGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGga                                                                                                          >  2:275701/1‑211 (MQ=255)
                                                                                                                                                                                                                                                      gCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGt                           >  2:732919/1‑289 (MQ=255)
                                                                                                                                                                                                                                                          cAACCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATc                       <  1:296574/289‑1 (MQ=255)
                                                                                                                                                                                                                                                           aaCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCGCTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCg                      <  2:342942/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACTAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAGTGGAGAGCACGAAGATGAAAACCAGTGTGCCAATTGTCGCTTTGCAAAACGAAGACGTCGAATTACACGGTGAATCGCCAGATGAACGa                     >  2:1721743/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGAt                                                                                                                                             >  1:1701350/1‑169 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCt                                                                                                                 <  2:1229952/197‑1 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCt                                                                                                                 >  1:1229952/1‑197 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGa                     >  1:889434/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGa                     >  2:2368179/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            aCCGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGAGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAACATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGCATTACACGGTGAATCGCCAGGTGATCGa                     >  1:1571908/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              cGATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAAc                   <  1:1747760/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               gATTGGTTTAGCCAAACGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACg                  >  2:1002878/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        aGCCAAACGGATTG‑GTTCGCGATTGAAAACCAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCAtt         <  2:596228/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCg                                                                                                                                  <  1:2377397/162‑1 (MQ=255)
                                                                                                                                                                                                                                                                              aCGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTacac                                          >  2:2267476/1‑250 (MQ=255)
                                                                                                                                                                                                                                                                              aCGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAATCGCCAGGTGATCGAACGTTAACCATTCCTTGt   >  2:1203051/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               cGGATTG‑GTTCGCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACg                                                                                                   >  2:908271/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                                         |||                                                                                                                                                                                                                                                                                     
TGGTTGTTCCCGGTGGGCATTGAAGCCCTGATCGGTAAAGTCCGATTTTCTCGGTTGGGGATTAAACTTGCCGAGACGCACAACAAAGGTTATCGCTGGCAGCATGAAGCGGTTATTGCTCTTGCCAGTCCCGATAATATGAATGCATTCGAGCTGACACCGCAGGAAGCGGAGGAGTGGTATCGCGGGCGCGATGTTTACCCGCAAGCCGCGCCAGTGGCGGATGATGTATTGGTTACTTT‑CCAGCATCAACCGATTGGTTTAGCCAAACGGATTG‑GTAGCCGATTGAAAAACAGCTATCCGCGTGAACTGGTGCGCGATGGGAAACTTTTTACCGGTAACGCCTGACAGCGCACAAAAAAAGCGCACTTTTTGACTGGCACATTCGGCTGCCTCAACTAGGCTGAAAAATGGTGCGATCGGACTGGTCGTACCACAATCGGCAGCTAAATGGAGAGCACGAAGATGAAAACCAGTGTGCGCATAGGCGCTTTTGAAATCGACGACGGCGAATTACACGGTGAAAGCCCAGGTGATCGAACGTTAACCATTCCTTGTA  >  CP042583/1602034‑1602592

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A