Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,605,077 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,605,0770GC99.5% 469.2 / NA 203intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (102/100);  total (102/101)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,605,0780CG99.0% 463.4 / NA 203intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/1);  new base G (101/98);  total (102/101)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,605,0790TA100.0% 484.8 / NA 203intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (102/101);  total (102/101)

Only 100 of 203 total aligned reads displayed.

TACACCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTC  >  CP042583/1604797‑1605358
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
tACACCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATAc                                                                                                                                                                                                                                                                                   >  1:1861098/1‑289 (MQ=255)
 acacCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACa                                                                                                                                                                                                                                                                                  <  1:671700/289‑1 (MQ=255)
  ccccATAGGACCGGAAGTAATCCCCCAAACCACGCCGCCGCGCAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGGCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACAt                                                                                                                                                                                                                                                                                 <  2:1239963/287‑1 (MQ=255)
  cacCAGAGCACCGGCAGTAATCCCCCAAACCCCGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACAt                                                                                                                                                                                                                                                                                 <  1:1092838/289‑1 (MQ=255)
  cacCAGAGCACCAGCAGTAAACCCGCAAACCACGCCGCCGGACAAATCAGGTGGATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACAt                                                                                                                                                                                                                                                                                 <  2:1126823/289‑1 (MQ=255)
     cAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACa                                                                                                                                                                                                                                                                                  >  2:130236/1‑285 (MQ=255)
     cAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACa                                                                                                                                                                                                                                                                                  >  1:203537/1‑285 (MQ=255)
     cAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTg                                                                                                                                                                                                                                                                              >  2:180015/1‑289 (MQ=255)
        agCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTcc                                                                                                                                                                                                                                                                           >  2:515136/1‑289 (MQ=255)
         gaaCCGGCAGTACACCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCACCTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGt                                                                                                                                                                                                                                                                             <  2:79594/284‑1 (MQ=255)
         gaaCCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGt                                                                                                                                                                                                                                                                             <  2:691585/284‑1 (MQ=255)
         gCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGt                                                                                                                                                                                                                                                                             <  2:1103131/286‑1 (MQ=255)
         gCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGt                                                                                                                                                                                                                                                                             <  1:593270/286‑1 (MQ=255)
              ggCAATAATCCCCCAAACCACGCCGCCGCACAAATCAGGTAAATCGCGTGATTAGTCTGATGGCTTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCg                                                                                                                                                                                                                                                                     <  1:294398/289‑1 (MQ=255)
               ccAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGCCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGt                                                                                                                                                                                                                                                                    <  1:503442/288‑1 (MQ=255)
                  gTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTc                                                                                                                                                                                                                                                                  >  1:1389670/1‑288 (MQ=255)
                           cAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCCAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGCCCATCTCGTTCCCACCAAcc                                                                                                                                                                                                                                                         >  2:1714012/1‑288 (MQ=255)
                              aCCAGGCCGCCGCAAATAGCAGTTGAAACGGATGTTTATTCTGGAGGAATTTCGCGTTTACCACTTCATTAGGAGGCCCCTACCCTACCGCCGCCAGCAGGATAAGTTGCGCGGTAGTGAACAAAAACAGCAAACGTGGCATAATCCTCGGTTGCATGAGGTCGACGAGTAACGTGACGAGTGCGATAACAATTTGCCATAACCAGATGCCACCAATCTGCGTTTTCAAAACATGCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGcc                                                                                                                                                                                                                                                     <  2:62759/289‑1 (MQ=255)
                                       cggaacaAGTCAGGTGAATCGCGTGATTGGTCTGTGTGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGc                                                                                                                                                                                                                                            <  2:1733256/285‑1 (MQ=255)
                                       ccgctaaagtCATGTGAATCAGGTGCTACGTCTGATGGATTTCAGCTGTTACCCCTTCATTCTGCGTCCCTTGCCCCGCCCCCTCCAGAAGAACAAATTGCTGGGTAGTGAGCATAAACACCAAACGGGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGc                                                                                                                                                                                                                                            <  2:743318/280‑1 (MQ=255)
                                       ccgcACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGc                                                                                                                                                                                                                                            <  1:849261/289‑1 (MQ=255)
                                       ccgcACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGc                                                                                                                                                                                                                                            <  1:1355299/289‑1 (MQ=255)
                                        cgcACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGc                                                                                                                                                                                                                                            <  1:975007/288‑1 (MQ=255)
                                          cacaATCCAGGTGAATCGCGGGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCCGAGTCGAATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAg                                                                                                                                                                                                                                         <  2:1337222/289‑1 (MQ=255)
                                             caaTCAGGTTAATGCCGTGTTTAGTCTGATGGCTTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  2:5755/288‑1 (MQ=255)
                                             aattCAGGTGAATCTGTTGATTAGTCTGATGGATTTTCGATGTTACCCCTTCATTCAGGGCCGCATGCCCCCCTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCTGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  2:398009/286‑1 (MQ=255)
                                             aaaTCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  1:1701600/289‑1 (MQ=255)
                                             aaaTCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  1:515136/289‑1 (MQ=255)
                                             aaaTCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  1:1568911/289‑1 (MQ=255)
                                             aaaTCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  1:680081/289‑1 (MQ=255)
                                             aaaTCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTAAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATGACGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCACGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                                      <  1:1019259/289‑1 (MQ=255)
                                                         tCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGc                                                                                                                                                                                                                             >  1:1288539/1‑286 (MQ=255)
                                                           gcgTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGACCGGCGAGCATTGCAGTGGccatga                                                                                                                                                                                                                        >  2:604341/1‑284 (MQ=255)
                                                              tGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCa                                                                                                                                                                                                                     >  2:334959/1‑289 (MQ=255)
                                                                         aTGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACg                                                                                                                                                                                                          >  1:753613/1‑289 (MQ=255)
                                                                                               tcattcaGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCa                                                                                                                                                                                    >  1:321912/1‑289 (MQ=255)
                                                                                                       cGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCa                                                                                                                                                                                                                     <  2:162076/248‑1 (MQ=255)
                                                                                                       cGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACg                                                                                                                                                                             >  1:936071/1‑288 (MQ=255)
                                                                                                       cGTCGCATGCCACACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGACGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACg                                                                                                                                                                             <  2:1774122/288‑1 (MQ=255)
                                                                                                                    aCTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCACACTCCAGCCGGCAGCGTGCTGTTGTAAACGCCGACAACGCTTCGCCCGCCAGc                                                                                                                                                               >  1:191021/1‑289 (MQ=255)
                                                                                                                    aCTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAg                                                                                                                                                                >  2:839056/1‑288 (MQ=255)
                                                                                                                          gCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCa                                                                                                                                                                                                                     >  2:1888906/1‑229 (MQ=255)
                                                                                                                           ccggaagAATAAGTGGCGCGGTAGTACGCATAAACAGCAAACGGGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAAt                                                                                                                                                        <  2:1488163/284‑1 (MQ=255)
                                                                                                                           ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                          <  1:963494/191‑1 (MQ=255)
                                                                                                                           ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                          >  2:963494/1‑191 (MQ=255)
                                                                                                                           ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGaa                                                                                                                                                         >  2:116003/1‑288 (MQ=255)
                                                                                                                           ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGaa                                                                                                                                                         >  1:122691/1‑288 (MQ=255)
                                                                                                                               cagAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTc                                                                                                                                                    >  1:1772702/1‑289 (MQ=255)
                                                                                                                                       aTTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTGCGAGGGCGAGAACAATTTGCCATAACCAGATGACACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGAAGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgc                                                                                                                                            <  2:87347/289‑1 (MQ=255)
                                                                                                                                         tGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGGAGAAAACGCTTCGCCAGACAACGCCGAATCGTCAAGGGGgcca                                                                                                                                          >  2:93858/1‑289 (MQ=255)
                                                                                                                                            gcgGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGAAGCGTGCTGTTGTAAACGCAGAAAACGCTCAGACAGCAAGCGACGAAACCTCAAGGGGgccagcc                                                                                                                                       >  2:711161/1‑289 (MQ=255)
                                                                                                                                               gTAGTGGGAAAAACCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGccagccag                                                                                                                                     <  2:379979/288‑1 (MQ=255)
                                                                                                                                                       cATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTAc                                                                                                                            >  1:618312/1‑289 (MQ=255)
                                                                                                                                                       cATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTAc                                                                                                                            >  2:464325/1‑289 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTTCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGACCCGGACAtt                                                                                                                         >  2:920740/1‑289 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgccagcc                                                                                                                                       >  1:1636177/1‑275 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAtt                                                                                                                         >  2:478618/1‑289 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAtt                                                                                                                         >  1:349974/1‑289 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGC‑AAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAtt                                                                                                                         >  2:1569056/1‑288 (MQ=255)
                                                                                                                                                          aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGAACAACGTTACGAGGACGAGAACACTTTGCCATAACCAGACGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACACCTGTCCATCCCGTTCCCATCAACCCACCCTGAACGGCGAGCATTGCAGTGGCCCCGATCAAACTCCAGACGGCAGCGTGCTGGTGGAAACCCAGACGACGCCTCGCCAGCGAGCGACGAACCGTCCCGGCGCCCACCCAGACACCGGACa                                                                                                                           >  2:1641811/1‑287 (MQ=255)
                                                                                                                                                               gCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGaa                                                                                                                    >  1:1522756/1‑289 (MQ=255)
                                                                                                                                                                cAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCACGACAGGCACCggaacttgagaa                                                                                                                    >  1:1306736/1‑277 (MQ=255)
                                                                                                                                                                cAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCAGCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTTCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGAACAAGCGTCAAGCGGGTCAGCCAGGCACCGTTCATTGCGaa                                                                                                                    >  2:637160/1‑288 (MQ=255)
                                                                                                                                                                 aaaCGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCa                                                                                                                                                                                                                     <  2:1665675/190‑1 (MQ=255)
                                                                                                                                                                 aaaCGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTg                                                                                                                                                                                                  >  1:1112539/1‑209 (MQ=255)
                                                                                                                                                                 aaaCGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGa                                                                                                                     <  1:1582640/286‑1 (MQ=255)
                                                                                                                                                                       gtcATGTTCCGCGGTTGCATAAGGAGGACCATCACAGTTACGGTGGCCAGAACAATTTGCCATGTCCAGATGCCACCAACCTGCGTTTGACAAACAGCCTGCCGAATGTTTGGCGAAAGTACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTTATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCaaaaa                                                                                                            <  2:22938/287‑1 (MQ=255)
                                                                                                                                                                             ttCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACgg                                                                                                                                                                                                         <  2:521756/190‑1 (MQ=255)
                                                                                                                                                                             ttCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACgg                                                                                                                                                                                                         >  1:521756/1‑190 (MQ=255)
                                                                                                                                                                              tCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAATAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCGTCGCCAGCAAACGACGAATCGTCAAGGGGGCCAGGCAGGCAACGTACATTGCGCAGCCAAAAAcacgca                                                                                                      >  1:1502291/1‑283 (MQ=255)
                                                                                                                                                                                        cATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACt                                                                                                                                                                                                                          >  2:1390420/1‑162 (MQ=255)
                                                                                                                                                                                               gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGa                                                                                    >  1:1214503/1‑289 (MQ=255)
                                                                                                                                                                                               gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGa                                                                                    >  1:603644/1‑289 (MQ=255)
                                                                                                                                                                                                  acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCa                                                                                                                                                                                                                            <  1:1295853/150‑1 (MQ=255)
                                                                                                                                                                                                  acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATaa                                                                                 >  1:1033738/1‑289 (MQ=255)
                                                                                                                                                                                                  acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATaa                                                                                 >  2:1703235/1‑289 (MQ=255)
                                                                                                                                                                                                     aTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACAAGCATCAGCGAGGTGAAATGGATAAAta                                                                              >  1:1257766/1‑288 (MQ=255)
                                                                                                                                                                                                         aCGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAg                                                                          <  2:274167/289‑1 (MQ=255)
                                                                                                                                                                                                          cgtaacggtgggaagaACAATTTGCCATAACCCGATGCCACCAAACTGCGTTTGCCAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAGCTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgc                                                                         <  2:1033738/276‑1 (MQ=255)
                                                                                                                                                                                                           gTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                        <  2:603644/289‑1 (MQ=255)
                                                                                                                                                                                                           gTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                        <  1:180015/289‑1 (MQ=255)
                                                                                                                                                                                                           gTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                        <  1:1728293/289‑1 (MQ=255)
                                                                                                                                                                                                           gTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                        <  2:1751617/289‑1 (MQ=255)
                                                                                                                                                                                                             tACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCg                                                                             <  2:678295/282‑1 (MQ=255)
                                                                                                                                                                                                                    gCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAAACGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAgg                                                               >  2:1280860/1‑289 (MQ=255)
                                                                                                                                                                                                                     cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGAAGCGCGATCCAGGt                                                              >  1:1190729/1‑289 (MQ=255)
                                                                                                                                                                                                                       agaACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCCAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTaa                                                            >  2:1835599/1‑289 (MQ=255)
                                                                                                                                                                                                                       agaACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTaa                                                            >  2:77091/1‑289 (MQ=255)
                                                                                                                                                                                                                                tGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCa                                                   <  1:1622136/289‑1 (MQ=255)
                                                                                                                                                                                                                                      aaCCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACTTCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGattt                                             >  1:386657/1‑289 (MQ=255)
                                                                                                                                                                                                                                            aTGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATCAAGCGCAGCGCGATCCAGGTCAAGGCCAGCATGATTTATTTc                                        >  2:840671/1‑288 (MQ=255)
                                                                                                                                                                                                                                            aTGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTc                                        >  1:1393411/1‑288 (MQ=255)
                                                                                                                                                                                                                                               ccaccaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                                    <  2:203537/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 accaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTa                                  >  1:768547/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ccaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTaa                                 <  2:1371710/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaaCTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAg                               <  1:1692293/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAg                         >  1:726672/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           gTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAgt                        >  1:31439/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  caaaaGCCTGCCCAATGGTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCAATGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCATCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCttt                 <  2:1634486/285‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 tGTTTGGCGAAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTc  <  1:478618/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TACACCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCCGCACAAATCAGGTGAATCGCGTGATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATACATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTATGCCCGTC  >  CP042583/1604797‑1605358

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A