Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,605,077 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,605,0770GC99.0% 437.6 / NA 194intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (97/92);  total (98/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,605,0780CG98.5% 444.2 / NA 194intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (96/95);  total (98/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,605,0790TA99.5% 456.2 / NA 194intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (1/0);  new base A (97/95);  total (98/96)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 194 total aligned reads displayed.

TACACCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTA  >  CP042583/1604797‑1605350
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                
  cacCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CAt                                                                                                                                                                                                                                                                         <  1:1186018/289‑1 (MQ=255)
  cacCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CAt                                                                                                                                                                                                                                                                         <  1:850239/289‑1 (MQ=255)
        agCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTc                                                                                                                                                                                                                                                                    >  2:1232988/1‑288 (MQ=255)
        agCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CAACTGTc                                                                                                                                                                                                                                                                    >  1:204393/1‑288 (MQ=255)
        agCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAAAGTTTGGCGAAAACA‑CATCTTTcc                                                                                                                                                                                                                                                                   >  2:737366/1‑289 (MQ=255)
             cGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATccc                                                                                                                                                                                                                                                              >  1:331725/1‑289 (MQ=255)
             cGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATccc                                                                                                                                                                                                                                                              >  1:1281292/1‑289 (MQ=255)
                         cccAAACCACGCGGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATTGATTTTCGCTGTTACCCCTTAATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                  <  1:1584855/289‑1 (MQ=255)
                         cccAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                  <  1:297212/289‑1 (MQ=255)
                         cccAAACCA‑GCCGCCGGAACAATTCAGGTGAATCGCGT‑GTTTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGGCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                  <  2:1322726/289‑1 (MQ=255)
                                     cgcc‑gcACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACg                                                                                                                                                                                                                                      <  1:1437308/289‑1 (MQ=255)
                                     cgcc‑gcACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACg                                                                                                                                                                                                                                      <  1:1150127/289‑1 (MQ=255)
                                        c‑gcACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGAGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGCTTGCATAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCg                                                                                                                                                                                                                                   >  1:2254923/1‑289 (MQ=255)
                                              aaaTCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                              <  1:1232988/289‑1 (MQ=255)
                                              aaaTCAGGGGAA‑CGCCTGGATTGTTCTGATGGATTTTCGCGGTAACCCCTTCATTCACCGTCGCATGCCCACATCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                              <  2:1628817/289‑1 (MQ=255)
                                                   aGGTGAGTCGCGT‑GATTAGTCTGATGGATTTTCGCTGGTACCCCCTCATTCGGCGTCGCATGCCCCACTCCCGCAAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAg                                                                                                                                                                                                                         <  2:48739/289‑1 (MQ=255)
                                                      tGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAg                                                                                                                                                                                                                         <  2:1701164/286‑1 (MQ=255)
                                                        aaTCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGt                                                                                                                                                                                                                                                                     <  2:1945936/240‑1 (MQ=255)
                                                         atagcgT‑GATTAGCCTTATGGATTTTCGCGGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCAc                                                                                                                                                                                                                   <  2:1939661/286‑1 (MQ=255)
                                                          tCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGt                                                                                                                                                                                                                                                            <  1:1644833/247‑1 (MQ=255)
                                                                   ttAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCaaa                                                                                                                                                                                                           <  1:571363/288‑1 (MQ=255)
                                                                                 tttCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGTATTGCAGTGGCACCGATCAAACTACAGACGGCAGCg                                                                                                                                                                                            >  1:379624/1‑289 (MQ=255)
                                                                                                 tcattcaGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTCAACGCa                                                                                                                                                                            >  2:1337696/1‑289 (MQ=255)
                                                                                                       aGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGGTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGAAGGCAGCGTGCTGTTGTAAACGCAGAAAAc                                                                                                                                                                      >  2:1526690/1‑289 (MQ=255)
                                                                                                                 gCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAg                                                                                                                                                            <  2:2722160/289‑1 (MQ=255)
                                                                                                                   cccACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCa                                                                                                                                                          >  1:2087045/1‑289 (MQ=255)
                                                                                                                     cACGCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCGAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAg                                                                                                                                                        <  2:964669/289‑1 (MQ=255)
                                                                                                                             ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGCGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGaa                                                                                                                                                 >  2:947967/1‑288 (MQ=255)
                                                                                                                             ccAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGaa                                                                                                                                                 >  1:1334655/1‑288 (MQ=255)
                                                                                                                                         aTTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgc                                                                                                                                    <  2:408275/289‑1 (MQ=255)
                                                                                                                                           tGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgcca                                                                                                                                  >  1:1941712/1‑289 (MQ=255)
                                                                                                                                              gcgGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                  >  1:2234715/1‑174 (MQ=255)
                                                                                                                                              gcgGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAAc                                                                                                                                                                                                                                                  <  2:2234715/174‑1 (MQ=255)
                                                                                                                                              gcgGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgccagcc                                                                                                                               >  1:48189/1‑289 (MQ=255)
                                                                                                                                              ccgGTAGTGAGCATAAACAGCAACCGTGGCATATACCGCGGTTGCATAAGGGCGACGATCAACGTTACGATGACGAGAACAATTTGCCATAACCAGATGCCACCAACCTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgccagcc                                                                                                                               <  1:2311796/288‑1 (MQ=255)
                                                                                                                                                 gTAGTGAGAATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGccagccag                                                                                                                             <  1:2669428/288‑1 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                              <  2:2371022/180‑1 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                              >  1:2371022/1‑180 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGc                                                                                                                                                                                                                     >  2:2465540/1‑189 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGc                                                                                                                                                                                                                     <  1:2465540/189‑1 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGACAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAt                                                                                                                  >  1:1518315/1‑288 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAtt                                                                                                                 >  1:550382/1‑289 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACAtt                                                                                                                 >  1:731213/1‑289 (MQ=255)
                                                                                                                                                            aaaCAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCAAGCCAGGCACCGTACaat                                                                                                                 >  1:1811436/1‑287 (MQ=255)
                                                                                                                                                                 gCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTg                                                                                                                                                                                          >  1:1613593/1‑211 (MQ=255)
                                                                                                                                                                 gCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCaa                                                                                                                                          >  2:1514144/1‑259 (MQ=255)
                                                                                                                                                                 gCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGaa                                                                                                            >  1:2214488/1‑289 (MQ=255)
                                                                                                                                                                 gCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTAGGCGAAAATA‑CACCTGTCCATCCAGGTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGCCACCGATCAAACTCCAGACGGCAGCGTGCTGTTTTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCTGCAAGGGGGCCAGCCCGGCACCGTACCTTACGaa                                                                                                            >  2:2498777/1‑289 (MQ=255)
                                                                                                                                                                  cAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGaa                                                                                                            >  1:1416769/1‑288 (MQ=255)
                                                                                                                                                                          gCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATc                                                                                                                                                                                                                                                                <  1:925394/132‑1 (MQ=255)
                                                                                                                                                                          gCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCAt                                                                                                                                                                                                                              >  2:566065/1‑166 (MQ=255)
                                                                                                                                                                                       ttGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAgcgag                                                                                      >  2:1545284/1‑285 (MQ=255)
                                                                                                                                                                                         gCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAgcgaggt                                                                                    >  1:1206148/1‑283 (MQ=255)
                                                                                                                                                                                                 gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCGTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGCAAACGCAGAACACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCGAGGCCCTGGACATCTGTCAGCCAAAAACGAGCACAAGCGAGGTGCAATGGa                                                                            >  2:2672462/1‑289 (MQ=255)
                                                                                                                                                                                                 gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGGCCCGTACATTGCCAAGCCAAAAACCACCCACAGCTAGGGGAAATGGa                                                                            >  2:2088042/1‑289 (MQ=255)
                                                                                                                                                                                                 gCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGACAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGa                                                                            >  1:1591519/1‑289 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACt                                                                                                                                                                                                         >  1:997332/1‑161 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGgc                                                                                                                                    >  2:2050956/1‑230 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCAc                                                                                                                         <  1:2008710/241‑1 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCAc                                                                                                                         >  2:2008710/1‑241 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAAt                                                                               >  1:1103074/1‑283 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAAt                                                                               <  2:1103074/283‑1 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATaa                                                                         >  1:2614343/1‑289 (MQ=255)
                                                                                                                                                                                                    acgaTCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATaa                                                                         >  2:2574483/1‑289 (MQ=255)
                                                                                                                                                                                                       aTCAACGTTACGAGGCCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTCTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGCGCATTGCAGTGGCACTTATCAAACTCCAGCCGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCTACGAATCGCCAACGGGGCCAGCCAGGCACCGTACATTCGGACGCCAAAAACAAGTATCACGGCGGTGAAATGGAtcaca                                                                       >  2:757362/1‑284 (MQ=255)
                                                                                                                                                                                                          aaCGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGATGTAAACGCAGAAAACGCTTCGCCAGCAATCGACGAATCGTCAAGGGGGTCAGCCAGGCCCCGTACATTGCGAAGCCAACAACCAGCACCAGCGCGGTGAAATGGGTAAAtgcc                                                                    >  2:105631/1‑285 (MQ=255)
                                                                                                                                                                                                             gTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCAGAGCGGCGGGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                <  2:301007/289‑1 (MQ=255)
                                                                                                                                                                                                              ttACGAGGGCGGGAACAATTTGCCATAACCCGAACACCCCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAgcg                                                                <  2:1880351/288‑1 (MQ=255)
                                                                                                                                                                                                               aaCGAGGGAGAGAAAAATTTGCCATAACCAGATGCCACCAAACAGCGTTTGAAAAACAGCCTGCCAAAAGTTTGGAGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGcgcg                                                              <  2:2273829/288‑1 (MQ=255)
                                                                                                                                                                                                                 cGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACAAGAACGAGCGAGGTGAAATGGATAAACCGAAGCGCGa                                                             >  2:1798408/1‑288 (MQ=255)
                                                                                                                                                                                                                      gCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGc                                                                                                                                                                                                                                              <  2:12700/106‑1 (MQ=255)
                                                                                                                                                                                                                      gCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGc                                                                                                                                                                                                                                              >  1:12700/1‑106 (MQ=255)
                                                                                                                                                                                                                      gCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAgg                                                       >  1:1880351/1‑289 (MQ=255)
                                                                                                                                                                                                                       cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTg                                                                                                                                                                                          >  1:67549/1‑157 (MQ=255)
                                                                                                                                                                                                                       cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTg                                                                                                                                                                                          <  2:67549/157‑1 (MQ=255)
                                                                                                                                                                                                                       cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCg                                                                     >  2:517989/1‑274 (MQ=255)
                                                                                                                                                                                                                       cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCg                                                                     <  1:517989/274‑1 (MQ=255)
                                                                                                                                                                                                                       cGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGt                                                      >  1:449807/1‑289 (MQ=255)
                                                                                                                                                                                                                         agaACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAACATCAGCGAGGGGAAATGGATAAATAGCTGCGCGACCCAGGTaa                                                    >  2:884405/1‑289 (MQ=255)
                                                                                                                                                                                                                                tttGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGGCAGGCACCGTACATCGCGAAGTCAAAAACCAGCATTAGCGAAGGGAAAAGGATAACTCGCAGCGCGATCCACGTCAACACCa                                              >  2:730945/1‑288 (MQ=255)
                                                                                                                                                                                                                                  agCCAGACCCAGAAGCCACCATGCTGGGTTAGACAACCAGCCTGCCAAAGGTTTGGAGAAAATT‑CAGCGGTCCAACCCGTTCCCCTCAACCCGCCCTGAAGGGCGGGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGc                                            <  2:1420836/287‑1 (MQ=255)
                                                                                                                                                                                                                                     cATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGACAGCCAGGCACCGCACATCGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCag                                          >  1:1005381/1‑286 (MQ=255)
                                                                                                                                                                                                                                      aTAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGat                                       <  2:1206148/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                 <  1:1356653/286‑1 (MQ=255)
                                                                                                                                                                                                                                               tGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGCAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                 <  1:764935/286‑1 (MQ=255)
                                                                                                                                                                                                                                               tGCCACCAAACTGCCGTTGCAAAACGACCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCAGCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACGGATCAAACCCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                 <  2:866503/286‑1 (MQ=255)
                                                                                                                                                                                                                                                 caaccaAACGTCGTTTCCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                            <  2:1611849/287‑1 (MQ=255)
                                                                                                                                                                                                                                                 acacaaAACTGCGTTTGCAAAACAGCCTGACAAATGTTAGGCGAAGATA‑AACCTGCCCATCCCGGTCCGATCAGCCCGCCCGGAACGGCGAGCAGTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGc                            <  2:1584251/288‑1 (MQ=255)
                                                                                                                                                                                                                                                  caccaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGccagccag                                                                                                                             <  1:1913146/191‑1 (MQ=255)
                                                                                                                                                                                                                                                   accaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTa                          >  1:28285/1‑289 (MQ=255)
                                                                                                                                                                                                                                                   accaAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTa                          <  1:884405/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   accaAACGGCGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTa                          <  2:2327574/289‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                 >  2:511575/1‑273 (MQ=255)
                                                                                                                                                                                                                                                            cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGatttattt                                 <  1:511575/273‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAg                 >  1:1479732/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            cGTTTGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGGTAAATGGCTCAATCGCAGAGCGACCCAGGTAAACGCCAGCAGGCTTTATTTCACGCTAACGGTGTAg                 >  2:629179/1‑289 (MQ=255)
                                                                                                                                                                                                                                                              tttGCAAAACAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAgtg               >  1:563906/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                   aaaaCAGCCTGCCAAATGTTTGGCGAAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCtt          <  2:1296265/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    aaaCAGCCTGCCAAA‑GTTTTGGCGAAAAACCATCTGTCCACCCCGTTCCCACCACCCCGCCCTGAACGGCGGGCATTGCAGTGGACCTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCttt         <  2:1696529/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cTGCCAAATGTTTGGCGAAAAAA‑CATCTGTCCATCCCGTTCCAATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGCGAGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTa  <  2:2632970/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                
TACACCAGAGCACCGGCAGTAATCCCCCAAACCACGCCGCC‑GCACAAATCAGGTGAATCGCGT‑GATTAGTCTGATGGATTTTCGCTGTTACCCCTTCATTCAGCGTCGCATGCCCCACTCCCGCCAGCAGAATAAATTGCGCGGTAGTGAGCATAAACAGCAAACGTGGCATATTCCGCGGTTGCATAAGGGCGACGATCAACGTTACGAGGGCGAGAACAATTTGCCATAACCAGATGCCACCAAACTGCGTTTGCAAAACAGCCTGCCAAATGTTTGGGCTAAATA‑CATCTGTCCATCCCGTTCCCATCAACCCGCCCTGAACGGCGAGCATTGCAGTGGCACTGATCAAACTCCAGACGGCAGCGTGCTGTTGTAAACGCAGAAAACGCTTCGCCAGCAAGCGACGAATCGTCAAGGGGGCCAGCCAGGCACCGTACATTGCGAAGCCAAAAACCAGCATCAGGCTGGTGAAATGGATAAATCGCAGCGCGATCCAGGTAAACGCCAGCATGATTTATTTCACGCTAAAGGTGTAGTGTCCTTTCGTTTTA  >  CP042583/1604797‑1605350

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A