Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,611,056 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,611,0560AT99.3% 666.3 / NA 283intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (1/1);  new base T (143/136);  total (146/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.18e-01
*CP0425831,611,0570CG99.7% 674.9 / NA 283intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (145/137);  minor base A (1/0);  total (146/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,611,0580TA99.7% 673.2 / NA 283intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (145/136);  minor base G (1/0);  total (146/137)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 283 total aligned reads displayed.

TTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT  >  CP042583/1610776‑1611337
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
     gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                                                                                                                                                                                                                                              <  2:936868/289‑1 (MQ=255)
     gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                                                                                                                                                                                                                                              <  2:73981/289‑1 (MQ=255)
        ttGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGaa                                                                                                                                                                                                                                                                            >  1:1548384/1‑288 (MQ=255)
                cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGGTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCaacaac                                                                                                                                                                                                                                                                   <  2:1223470/289‑1 (MQ=255)
                 aCGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                                                                                                                                                                                                                                              >  2:134202/1‑277 (MQ=255)
                 aCGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag                                                                                                                                                                                                                                                                              <  1:134202/277‑1 (MQ=255)
                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaa                                                                                                                                                                                                                                                           >  1:1615270/1‑289 (MQ=255)
                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaa                                                                                                                                                                                                                                                           >  1:251708/1‑289 (MQ=255)
                        ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaa                                                                                                                                                                                                                                                           >  2:1316436/1‑289 (MQ=255)
                           ggTAATGAATATCGGCACTGTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTaaaaa                                                                                                                                                                                                                                                        <  2:1302216/289‑1 (MQ=255)
                                      tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACcaacaa                                                                                                                                                                                                                                                                    <  1:167977/266‑1 (MQ=255)
                                      tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCttt                                                                                                                                                                                                                                             >  1:669811/1‑289 (MQ=255)
                                         gCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATTCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCtttttt                                                                                                                                                                                                                                          >  1:778682/1‑289 (MQ=255)
                                                     cgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCACCTCTTTTTTTCATGTTTTtc                                                                                                                                                                                                                               >  1:504512/1‑288 (MQ=255)
                                                        acgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCa                                                                                                                                                                                                                           <  1:1318720/289‑1 (MQ=255)
                                                            ttAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAg                                                                                                                                                                                                                        <  1:1747174/288‑1 (MQ=255)
                                                            ttAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGc                                                                                                                                                                                                                       >  1:1144223/1‑289 (MQ=255)
                                                                 ggtactgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCTTCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACaa                                                                                                                                                                                                                   <  2:251799/280‑1 (MQ=255)
                                                                 ggtactgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGcaca                                                                                                                                                                                                                    <  1:272733/279‑1 (MQ=255)
                                                                 ggtactgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGAACCAAGCCACGGGATCGGCCTTACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATCTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACaa                                                                                                                                                                                                                   <  2:1119897/280‑1 (MQ=255)
                                                                    actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCATCAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAt                                                                                                                                                                                                               >  2:94890/6‑289 (MQ=255)
                                                                    actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAt                                                                                                                                                                                                               >  2:1591170/6‑289 (MQ=255)
                                                                    actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAt                                                                                                                                                                                                               >  2:1515042/6‑289 (MQ=255)
                                                                    actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACAGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAt                                                                                                                                                                                                               >  2:535034/6‑289 (MQ=255)
                                                                     ctgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGTTCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAtt                                                                                                                                                                                                              <  2:687479/285‑1 (MQ=255)
                                                                      tgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTc                                                                                                                                                                                                             >  2:1896233/4‑289 (MQ=255)
                                                                        accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAg                                                                                                                                                                                                           >  2:1127832/2‑289 (MQ=255)
                                                                             ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCa                                                                                                                                                                                                                           <  2:1540935/268‑1 (MQ=255)
                                                                             ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAg                                                                                                                                                                                                                        >  1:1448426/1‑271 (MQ=255)
                                                                             ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGaa                                                                                                                                                                                                      >  1:1188069/1‑289 (MQ=255)
                                                                                 catcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCa                                                                                                                                                                                                  <  1:1288583/289‑1 (MQ=255)
                                                                                    cTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATgg                                                                                                                                                                                               <  2:1711587/289‑1 (MQ=255)
                                                                                       tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTTGCTGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCTTAAAAACGCCCCTCTTTTTTTCGTGTTTTTCTCCATAGCACCATGATCCAGGAGAAAGCTTTGTAc                                                                                                                                                                                            >  2:1647321/1‑289 (MQ=255)
                                                                                       tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTAc                                                                                                                                                                                            >  1:1405611/1‑289 (MQ=255)
                                                                                       tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTCCATGTTTTGCTCCATAGCACAATGATTCAGGAGAAAGCATGGTAc                                                                                                                                                                                            >  2:302351/1‑289 (MQ=255)
                                                                                             gAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACCCCCCCCTTTTTTTCATGTTTTTCCTCATAGCACAATGATTCAGGAGAAAGCATGGAACAAATTg                                                                                                                                                                                      >  2:413582/1‑289 (MQ=255)
                                                                                                      gCAAACTGACCCAAGCCACGGGATCGGCATGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgc                                                                                                                                                                              >  2:622619/1‑288 (MQ=255)
                                                                                                        aaaCTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCa                                                                                                                                                                           >  1:957569/1‑289 (MQ=255)
                                                                                                          aCTGTCCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAg                                                                                                                                                                         <  1:1002025/289‑1 (MQ=255)
                                                                                                              aCCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTC‑TTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCt                                                                                                                                                                    >  1:1728968/1‑289 (MQ=255)
                                                                                                                    gCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACAGACTTGCTGGTTTCATTATTGGCAGCGATAACTGATGCGATGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATCGCACAATGATTCAGGAGAAAGCATGTTACAAATTGTCAGGCGCGCAAGTTGCTTAAg                                                                                                                                                                >  2:1055067/1‑288 (MQ=255)
                                                                                                                      cACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGc                                                                                                                                                              <  1:1640291/288‑1 (MQ=255)
                                                                                                                         gggATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt                                                                                                                                                                                                 <  1:1382333/250‑1 (MQ=255)
                                                                                                                              cGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtga                                                                                                                                                     >  2:89340/1‑286 (MQ=255)
                                                                                                                               ggCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag                                                                                                                                                    <  1:1515042/289‑5 (MQ=255)
                                                                                                                                gCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag                                                                                                                                                    >  2:436568/1‑284 (MQ=255)
                                                                                                                                       ctaCAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc                                                                                                                                            <  1:454431/287‑1 (MQ=255)
                                                                                                                                         aCAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTcc                                                                                                                                           >  2:1011688/1‑288 (MQ=255)
                                                                                                                                            aTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGCTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCT‑AAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  1:834795/289‑1 (MQ=255)
                                                                                                                                             ttttttGATCATCTGCCCAACGCGCCACGCGATTTTTTTGATAATCACGTTTTACGCTCGCGGCAATTCCGACAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  1:1068189/289‑1 (MQ=255)
                                                                                                                                             ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  2:459585/289‑1 (MQ=255)
                                                                                                                                             ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  1:1889699/289‑1 (MQ=255)
                                                                                                                                             ttttttGATCAGCTGCACACCGCGCCAAGCGAGGTTGTTGATAATCACGTTTTACGCTCGGGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACGTGCTGGTTTCATGATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  2:1449485/289‑1 (MQ=255)
                                                                                                                                               ttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGAtt                                                                                                                                                                                                              >  1:1906399/1‑215 (MQ=255)
                                                                                                                                                tttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGa                                                                                                                                   <  2:491729/289‑1 (MQ=255)
                                                                                                                                                       ttcgtccccatcagcCTCGCGATTTTGTTTATAGTCGCGTTTGACGCACGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGGGACCGACTTGCTGGTTTCATTATTGACAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCa                                                                                                                            <  2:788900/276‑1 (MQ=255)
                                                                                                                                                            cccAACGCGCCACGCGATTTTGTAGATAGTCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAACGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCATGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgac                                                                                                                       <  2:249539/289‑1 (MQ=255)
                                                                                                                                                             ccAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCATCAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGCGTGAGGCATCTTCCTCTTCGGATTCAGCACcgac                                                                                                                       <  1:94890/288‑1 (MQ=255)
                                                                                                                                                             ccAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacg                                                                                                                      <  1:933638/289‑1 (MQ=255)
                                                                                                                                                             ccAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgac                                                                                                                       <  1:786284/288‑1 (MQ=255)
                                                                                                                                                                 cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc                                                                                                                                      <  1:539492/269‑1 (MQ=255)
                                                                                                                                                                 cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacgc                                                                                                                     >  2:852817/1‑285 (MQ=255)
                                                                                                                                                                 cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga                                                                                                                     >  1:475835/1‑286 (MQ=255)
                                                                                                                                                                    gcCACGCGATTTTGTTGATAATAACGTTTTACGCTCGCGGCAATACCGGCAGCATCCAGATCTTCACACTTGTGGAAAGTGACCGACTTGCTAGTTTCATTATTGGAAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTGGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCtgtg                                                                                                               <  2:1814210/289‑1 (MQ=255)
                                                                                                                                                                      cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg                                                                                                             <  2:1251022/289‑1 (MQ=255)
                                                                                                                                                                        accgATTTTATGAAGAATCACGTGATACGCTCGCTGCAATTCCGGCAGCAGTCAGATCTTCCAACTGTGGGAAAGTGACCGACTTGCTGGCTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCGTCGGATTCAGCACCGACGACCTGTGGGGa                                                                                                           <  2:2213/287‑1 (MQ=255)
                                                                                                                                                                                  ttgATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAAttt                                                                                                  >  2:173536/1‑288 (MQ=255)
                                                                                                                                                                                     ctaacaaCGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGACCTTCACACTTTCGGAAAGTGACCGACTTGCTGGATTCATGATTGGGAGCGAAAACTGCTGCTCAGGGAGAAACCGACAACAGCCCTAAAGACGCCTCTCCTTTTTACATGATTTTCTCCGTAGGACAATGATTCAGAAGAAGGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCCGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCg                                                                                              <  2:1385464/283‑1 (MQ=255)
                                                                                                                                                                                     aTAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCg                                                                                              >  2:1631145/1‑289 (MQ=255)
                                                                                                                                                                                          cACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGtttt                                                                                         <  2:647472/289‑1 (MQ=255)
                                                                                                                                                                                               tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa                                                                                    <  1:615137/289‑1 (MQ=255)
                                                                                                                                                                                               tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGATGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa                                                                                    <  1:1116324/289‑1 (MQ=255)
                                                                                                                                                                                                 tACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATg                                                                                  <  1:1827208/289‑1 (MQ=255)
                                                                                                                                                                                                      tCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCt                                                                             <  2:148811/289‑1 (MQ=255)
                                                                                                                                                                                                      tCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCt                                                                             <  1:573530/289‑1 (MQ=255)
                                                                                                                                                                                                      tCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCt                                                                             <  2:1096868/289‑1 (MQ=255)
                                                                                                                                                                                                       cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCt                                                                             >  1:312622/1‑288 (MQ=255)
                                                                                                                                                                                                       cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCACTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAACTTGCCGGTTTTCAGAATGGTGcac                                                                            >  2:556564/1‑287 (MQ=255)
                                                                                                                                                                                                                         aTCCAGATCTTAACACTTTGGGAAAGTGACCGACTTGCTGGTGTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCt                                                          <  1:812308/289‑1 (MQ=255)
                                                                                                                                                                                                                            cAGATCTTCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgcc                                                       <  1:735218/289‑1 (MQ=255)
                                                                                                                                                                                                                                  ttCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCAt                                                 >  1:350636/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ttCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCAt                                                 >  2:343566/1‑289 (MQ=255)
                                                                                                                                                                                                                                  ttCACACTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGAACATCTTTCTGTTCGGCCAGCCAt                                                 >  2:66403/1‑289 (MQ=255)
                                                                                                                                                                                                                                    cacaCTTTGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAg                                               <  1:89340/289‑1 (MQ=255)
                                                                                                                                                                                                                                         tttGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa                                                                                    <  1:1214378/247‑1 (MQ=255)
                                                                                                                                                                                                                                         tttGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa                                                                                    >  2:1214378/1‑247 (MQ=255)
                                                                                                                                                                                                                                         tttGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaa                                          >  1:1489909/1‑284 (MQ=255)
                                                                                                                                                                                                                                           tGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATatcgaaagg                                        >  2:81604/1‑281 (MQ=255)
                                                                                                                                                                                                                                           tGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaagg                                        >  1:1809327/1‑282 (MQ=255)
                                                                                                                                                                                                                                           tGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaagg                                        >  2:596148/1‑282 (MQ=255)
                                                                                                                                                                                                                                           tGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaagg                                        >  2:509941/1‑282 (MQ=255)
                                                                                                                                                                                                                                           tGGGAAAGTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaagg                                        >  1:594673/1‑282 (MQ=255)
                                                                                                                                                                                                                                                   tgaccgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACg                                >  1:1466887/8‑289 (MQ=255)
                                                                                                                                                                                                                                                     accgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCTCGCTCTCACACTGGTCCCCAGCACATCTTTTTGTTCTGCCAGCCATAGCCACAGGGCTTCACGtt                              >  2:1857115/6‑289 (MQ=255)
                                                                                                                                                                                                                                                     accgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGCAAGGGCTTcctgtt                              >  2:1575585/6‑284 (MQ=255)
                                                                                                                                                                                                                                                          ctTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTc                          <  1:1055067/288‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACTCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCTCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt                      <  1:1766397/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt                      <  2:1424149/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             gCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt                      <  1:414980/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                       ttattGGCAGCGAAAACTGATGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt                      >  2:723533/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                       
TTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAAGTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAGAAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATGTTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT  >  CP042583/1610776‑1611337

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A