Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,611,056 |
3 bp→TGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,611,056 | 0 | A | T | 99.6%
| 555.4
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base T (118/116); minor base C (1/0); total (119/116) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01 |
| * | CP042583 | 1,611,057 | 0 | C | G | 98.7%
| 555.9
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (118/114); minor base T (1/2); total (119/116) |
| Fisher's exact test for biased strand distribution p-value = 6.19e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,611,058 | 0 | T | A | 99.6%
| 558.4
/ NA
| 235 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (119/115); minor base C (0/1); total (119/116) |
| Fisher's exact test for biased strand distribution p-value = 4.94e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 235 total aligned reads displayed.
TCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT > CP042583/1610777‑1611337
|||
tCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATGTTGTTGATAATCACGTTTTACGCCCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGGCGGTTTCCTTATTAGAAGCGAAAACTGATGCgcag > 2:1176457/1‑289 (MQ=255)
gcgttGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 2:1257931/286‑1 (MQ=255)
gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 1:604442/289‑1 (MQ=255)
agagaccggTCCACGCTGACCTGGTAATGAATATCGGCTCTATTACCACGCACGGTTAGCGGGACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCTCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCATATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 2:1408590/281‑1 (MQ=255)
tttGCAGTCCATGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑aa < 1:1022835/289‑1 (MQ=255)
cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:672809/289‑1 (MQ=255)
cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:180268/289‑1 (MQ=255)
aCGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAacaaca < 2:127480/289‑1 (MQ=255)
tGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGcc > 2:932633/1‑288 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCCACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCAGCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATCATTGTCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCACTaa > 2:151141/1‑289 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 1:165435/270‑1 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag > 2:165435/1‑270 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaaccacttgtctct > 1:1408590/1‑281 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTaa > 2:408272/1‑289 (MQ=255)
ggTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTaaaaa < 2:590009/289‑1 (MQ=255)
atatCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCGCGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCct > 2:301727/1‑288 (MQ=255)
tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCttt > 1:93126/1‑289 (MQ=255)
tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCCGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACAGACTTGCCGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGCCAG‑AAACCAACAACAGCCCTAAAAACGcccccgttt > 2:1560293/1‑284 (MQ=255)
cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCtttt > 2:1141754/1‑289 (MQ=255)
aCCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttt < 2:600491/289‑1 (MQ=255)
cacgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCGCGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:301727/289‑1 (MQ=255)
cacgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:1507933/289‑1 (MQ=255)
gcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTtctc < 2:1857321/289‑1 (MQ=255)
cctgTTAACGGTACTGACCATTTATCATCTTTCCCCTGCATGTTCTGCAAGCTGACTCAAGCCACGGGATCGGCCTGACAGTCAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACTTTTTACCCTCGCGGTAATTCCTGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTCACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCCGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa < 1:1194620/286‑1 (MQ=255)
acgGTTAGCCGTACTGACCATTTATCATCTGTTCCCTGAATGTCCTGCAAACTGACCGCAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGAGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa < 2:1731708/289‑1 (MQ=255)
ttAGCTGTACTGACCATTTCTCATCTTTACCCTGAATGTCCTGCAAACTGACCCCAGCCACGGGATCGGCCTGACCGACAATTTTTTTATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTGACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAg < 1:1539983/288‑1 (MQ=255)
ggtactgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGcaca < 1:230639/279‑1 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGCTTTTGTTGAAAATAACGTTTTACGCTCGCGGCATTTCCGCAAGAATCCAGATCTTCAAACTTGGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCA‑CCAAAACCTAAGCGCAAGGAGTAAACCAACACAAGCCCTAAAAACCACCCTC‑TTTTTTCATGTTTTTTCTCCATTGCACaagaat > 2:1824398/6‑285 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAt > 1:1249651/6‑289 (MQ=255)
ctgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAtt < 2:1676424/285‑1 (MQ=255)
tgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 1:1157613/221‑1 (MQ=255)
tgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTc > 1:422213/4‑289 (MQ=255)
accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAg > 2:1107476/2‑289 (MQ=255)
ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGaa > 2:1450521/1‑289 (MQ=255)
ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGAAGCGCAGGCCG‑AAACAAACAACAGACCTAAAAACGAACCTCTTTTTTTACAG‑TTTTTTTCCAAAACACAATGATTCAGgagac > 2:576887/1‑288 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCCTCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt < 2:1670220/289‑1 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAC‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCCCAATGATTCAGGAGAAAGCAt > 2:713989/1‑289 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt > 1:807071/1‑289 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTCTTTTCATG‑TTTTTCTCCATAGCACCATGATTCAGGACAAAGCAt > 2:1468729/1‑289 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTAc > 1:1538499/1‑289 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCATAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATCATTCAGACGAAAGCATGGTAc > 2:1075260/1‑289 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGACCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCCTCATAACAAAATGATTCAGTACAAAGCATGGTAc > 2:135702/1‑289 (MQ=255)
aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGt > 2:1619225/1‑289 (MQ=255)
aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGt > 2:1892664/1‑289 (MQ=255)
gCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgcg < 1:667534/289‑1 (MQ=255)
aCTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAg < 1:919497/289‑1 (MQ=255)
aCTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTGTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAg < 1:1253525/289‑1 (MQ=255)
tGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGtt < 1:213143/289‑1 (MQ=255)
cACGGAGTCGGCCTGACCGAAAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGcc < 1:49647/289‑1 (MQ=255)
tCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgt < 1:1141754/288‑2 (MQ=255)
cGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTCGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAACCGCCCCTCTTTTTTTCATG‑TTTTTCCCCATCGCCCAATGCTTCAGGACAAAGCATGGTACAAATTGTCAGGAGCGAAAGTTGCTTCAGGcccggtgtgc > 2:268904/1‑281 (MQ=255)
ggCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGGTAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCCTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag < 1:828884/289‑5 (MQ=255)
ggCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag < 1:1892664/289‑5 (MQ=255)
tGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgaggca > 2:1429768/1‑281 (MQ=255)
ccGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCtt < 1:895108/289‑1 (MQ=255)
aaTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCctct > 1:1462632/1‑289 (MQ=255)
ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc < 1:1308573/289‑1 (MQ=255)
ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc < 1:1879926/289‑1 (MQ=255)
tcatcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAg < 2:393876/289‑1 (MQ=255)
atcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGc > 1:1117992/1‑288 (MQ=255)
atcTGCCCAACGCGCCACACGTTTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCa < 2:525702/289‑1 (MQ=255)
gCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcga < 1:1724889/289‑1 (MQ=255)
ccAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgac < 1:560900/288‑1 (MQ=255)
cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGc > 2:853925/1‑245 (MQ=255)
cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGc < 1:853925/245‑1 (MQ=255)
cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga > 1:1071701/1‑286 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt > 2:1104648/1‑174 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg < 2:807071/289‑1 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg > 1:1390840/1‑289 (MQ=255)
tgATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGc < 1:204868/289‑1 (MQ=255)
tttcggCTCGGGGCCATTCCGGCAGCATCCAGATCGTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 2:227783/284‑1 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa > 1:1010328/1‑154 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAAGTTGCCGGTTTTCAGaa > 1:1631907/1‑289 (MQ=255)
tatACGCTCGAGGCAATTCGGGCAGCATGCAAATCTTCACACTTGGGGAAA‑GTGACCTACCTGCTGGTTTCATTATTGGCAGCGAAAACTTATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACTCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 2:1348088/287‑1 (MQ=255)
cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGATTGGTGccg > 2:1929053/1‑287 (MQ=255)
cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTc > 1:258657/1‑289 (MQ=255)
ggCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGc < 1:396920/289‑1 (MQ=255)
cAATTCCGGCAGCATCCAGATCTTCAGGCTTTGGGAAA‑GTGACCGCCTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAACACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGca < 2:1249651/288‑1 (MQ=255)
cAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGca < 1:135702/288‑1 (MQ=255)
agcaTCCAGGTCGTTACACCTTGGGAAAGGTAACG‑GCTTGCTGGTTTCATTATTGGCAGCGAAAACTTATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTACATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 2:250639/288‑1 (MQ=255)
agcaTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGATGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 1:1425660/288‑1 (MQ=255)
agcaTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 1:1107476/288‑1 (MQ=255)
aTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGtt < 1:1526218/287‑1 (MQ=255)
aTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGtt < 1:1084975/287‑1 (MQ=255)
tCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 2:895573/262‑1 (MQ=255)
cTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccagcca < 2:551049/289‑1 (MQ=255)
ttCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCAAGCCAt > 1:701455/1‑289 (MQ=255)
acTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcga < 1:977709/289‑4 (MQ=255)
tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCGCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCACGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACTGACGACCTGTGGGGACGGTAATTTGCCTGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTATGCCAGCAATatcgatagt > 2:1784528/1‑281 (MQ=255)
tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc < 2:1751779/189‑1 (MQ=255)
tgaccgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa > 2:1533714/8‑237 (MQ=255)
tgaccgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACg > 1:309172/8‑289 (MQ=255)
tgaccgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACg > 1:1449935/8‑289 (MQ=255)
tgaccgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGGGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCGGTGGGGCCGGTAATTCGCCGGTTTTCAGAATGGTGCTCAGCCCATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACg > 2:101829/8‑289 (MQ=255)
acgactTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCGCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTg < 2:1151799/285‑1 (MQ=255)
gTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCt < 1:574156/285‑1 (MQ=255)
tGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCCCCGACGACCTGTGGGGACGGTAATTTGCCTGTTGTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGACATAGTGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTgg > 1:1927318/1‑289 (MQ=255)
ggCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGga > 1:1451191/1‑289 (MQ=255)
gCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACACCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCGCGTGGCTCGTCTTCCATTTGCACTCGAGAAt > 2:530469/1‑289 (MQ=255)
cGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGCGAAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAAtt > 1:1759375/1‑289 (MQ=255)
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TCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGGGCTTCACGTTGCTCGTCTTCCATTTGCACTGGAGAATT > CP042583/1610777‑1611337
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
