Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,625,376 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,625,3760GC99.7% 695.0 / NA 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (153/141);  total (153/143)
Fisher's exact test for biased strand distribution p-value = 4.81e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,3770CG99.3% 699.5 / NA 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (153/141);  minor base A (0/2);  total (153/143)
Fisher's exact test for biased strand distribution p-value = 2.33e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,3780TA97.3% 675.6 / NA 296intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (153/133);  minor base G (0/8);  total (153/143)
Fisher's exact test for biased strand distribution p-value = 2.52e-03
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 296 total aligned reads displayed.

CGGCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAA  >  CP042583/1625097‑1625656
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
 ggCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTg                                                                                                                                                                                                                                                                                   >  1:1182646/1‑288 (MQ=255)
    aTTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCAt                                                                                                                                                                                                                                                                               <  2:461725/289‑1 (MQ=255)
    aTTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCAt                                                                                                                                                                                                                                                                               <  1:437171/289‑1 (MQ=255)
                             gATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCAc                                                                                                                                                                                                                                                       <  1:228138/288‑1 (MQ=255)
                              aTTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACg                                                                                                                                                                                                                                                      >  1:993510/1‑288 (MQ=255)
                              aTTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑c                                                                                                                                                                                                                                                    >  1:182415/1‑289 (MQ=255)
                                          cgtcgtCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCTTGCTTCACTTCGGCGAAATCACG‑CCCCCGACgcagc                                                                                                                                                                                                                                        >  2:1440090/1‑289 (MQ=255)
                                             cgtcgCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGcagcag                                                                                                                                                                                                                                      <  2:1048835/288‑1 (MQ=255)
                                                        gCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAAt                                                                                                                                                                                                                          <  1:1678649/289‑1 (MQ=255)
                                                          ccccggggTCTACGCTGAAAAAAGCCTTGCTGAATCAAAGAAGGTGCCCGCACATCCTCAATGGGTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATgc                                                                                                                                                                                                                        <  2:560324/283‑1 (MQ=255)
                                                          ccACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATgc                                                                                                                                                                                                                        <  1:519691/289‑1 (MQ=255)
                                                          ccACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATgc                                                                                                                                                                                                                        <  2:1214120/289‑1 (MQ=255)
                                                           cACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATgcg                                                                                                                                                                                                                       <  1:797391/289‑1 (MQ=255)
                                                             cgcgGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACgcagc                                                                                                                                                                                                                                        >  2:292043/1‑270 (MQ=255)
                                                             cgcgGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGcgcg                                                                                                                                                                                                                     >  2:1368510/1‑289 (MQ=255)
                                                                  tgtACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGt                                                                                                                                                                                                                 >  1:4855/1‑288 (MQ=255)
                                                                      cGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACcgc                                                                                                                                                                                                            >  1:1770537/1‑289 (MQ=255)
                                                                         tGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGa                                                                                                                                                                                                          <  1:558030/288‑1 (MQ=255)
                                                                          gCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgc                                                                                                                                                                                                        >  2:334782/1‑289 (MQ=255)
                                                                          gCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgc                                                                                                                                                                                                        >  1:59566/1‑289 (MQ=255)
                                                                            aaaaaGCCTTGCTGAATAAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTACACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATAGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgcgc                                                                                                                                                                                                      >  1:160668/1‑289 (MQ=255)
                                                                                  ccgtGCTAAAGCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAg                                                                                                                                                                                                <  2:1877205/286‑1 (MQ=255)
                                                                                               aaTAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGc                                                                                                                                                                                               >  2:1200799/1‑277 (MQ=255)
                                                                                                aTAAGGTTCCCGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcg                                                                                                                                                                                  <  2:1791906/289‑1 (MQ=255)
                                                                                                 tAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcgc                                                                                                                                                                                 <  2:182415/289‑1 (MQ=255)
                                                                                                 tAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcgc                                                                                                                                                                                 <  1:1886521/289‑1 (MQ=255)
                                                                                                 tAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcg                                                                                                                                                                                  >  2:643894/1‑288 (MQ=255)
                                                                                                 tAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATAGCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcgc                                                                                                                                                                                 <  2:308797/289‑1 (MQ=255)
                                                                                                                tCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACCAGCAACTTCCAGCGCGCCGTCATCACTCAtc                                                                                                                                                                   >  2:884525/1‑288 (MQ=255)
                                                                                                                 ccTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACgcagc                                                                                                                                                                                                                                        <  1:1300862/218‑1 (MQ=255)
                                                                                                                   tCAATGGTTTCATGTTCTTCGCCAATGGCTGCCGCCATGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                               <  2:1341460/289‑1 (MQ=255)
                                                                                                                   tCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                               <  1:1104844/289‑1 (MQ=255)
                                                                                                                   ctaaTGGTTTCCCGTTCTTCGCAAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTAACGATACCCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                               <  2:1299478/287‑1 (MQ=255)
                                                                                                                           ttCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCa                                                                                                                                                                                                                                                                                >  1:1556280/1‑169 (MQ=255)
                                                                                                                           ttCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATa                                                                                                                                                      >  1:327989/1‑289 (MQ=255)
                                                                                                                           ttCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTCCCAGCGCGCCGTCCTCACTCCTCCCAAG‑ccccctc                                                                                                                                                      >  2:224513/1‑286 (MQ=255)
                                                                                                                            tCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGt                                                                                                                                                                                                                                 <  1:1140994/214‑1 (MQ=255)
                                                                                                                            tCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCCATGCGCGGCGTACCGCCAGCGCGACGAGCAACTTCCAGCGACCCGACCTCCCTCAACCCAAG‑CCCCACaa                                                                                                                                                     >  2:407816/1‑289 (MQ=255)
                                                                                                                               cGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGc                                                                                                                                                  >  1:92086/1‑289 (MQ=255)
                                                                                                                                      cGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCt                                                                                                                                           <  2:1702020/289‑1 (MQ=255)
                                                                                                                                        caactGGCTGTCGCCAGGTTATCCAGACTACCAGGTCAACCAACGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAACCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTg                                                                                                                                          <  1:1656553/284‑1 (MQ=255)
                                                                                                                                         cAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCg                                                                                                                                        <  1:1231073/289‑1 (MQ=255)
                                                                                                                                              gCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTg                                                                                                                                    >  1:717391/1‑288 (MQ=255)
                                                                                                                                               cTGCGGCCTGGTTACCACAACCTCCAGGTCCCCCAAAGACCTTATCGATTACCGCCAGCAACAATTTCCGGTCTATGTAACCAAAACCGTCAGCATCGACATGCAACATATCCAGGGCCTGAGCAGCGATATCTGCCGCGCTGGTACCATCGTGCTTCCCTGCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                   <  2:604628/288‑1 (MQ=255)
                                                                                                                                               cTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCCTATAATCGAAACCTTCAGCATCGACATTCAACATAGCCAGCGCCTGGGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                   <  1:1076909/288‑1 (MQ=255)
                                                                                                                                               cTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGGGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                   <  1:1409263/288‑1 (MQ=255)
                                                                                                                                               cTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                   <  1:387738/288‑1 (MQ=255)
                                                                                                                                               cTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                   <  2:150834/288‑1 (MQ=255)
                                                                                                                                                tGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACg                                                                                                                                 <  1:304708/289‑1 (MQ=255)
                                                                                                                                                   cgccAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGata                                                                                                                              <  1:1352317/289‑1 (MQ=255)
                                                                                                                                                           tATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCa                                                                                                                       <  2:382162/288‑1 (MQ=255)
                                                                                                                                                             tCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGa                                                                                                                     >  1:1913696/1‑288 (MQ=255)
                                                                                                                                                                  aCCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGc                                                                                                                        <  1:977875/280‑1 (MQ=255)
                                                                                                                                                                  aCCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTCCGCTGCTACTGGCGTGATATTGCAGATCCgg                                                                                                                >  2:940290/1‑288 (MQ=255)
                                                                                                                                                                       cAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTg                                                                                                          >  1:1584201/1‑289 (MQ=255)
                                                                                                                                                                           tCCACCAAAGCACTTATCGATTACCGACAGCAACAATTTGCGGTCAAAATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCGGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATa                                                                                                       <  2:1843569/288‑1 (MQ=255)
                                                                                                                                                                           tCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATa                                                                                                       <  2:525091/288‑1 (MQ=255)
                                                                                                                                                                            ccaccaAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                               >  2:1454008/1‑232 (MQ=255)
                                                                                                                                                                            ccaccaAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATaaa                                                                                                     >  1:1264027/1‑289 (MQ=255)
                                                                                                                                                                               ccaAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAAc                                                                                                   >  1:198117/1‑288 (MQ=255)
                                                                                                                                                                               ccaAAGAACTTATAGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCCTCACCATCGACATTCAACATATCCAGCTCCTGAGCAGCGATATCCGCCGAGATGGCGCCATCGTGCTTCACTTCTGCGAAATCACG‑CACTCGACGCAGCAGACGGGTGGCAATGCGCGGCTTACCGCGACCGCGACGAGCAACTTCCAGCCAGCCGTCATCACTAACCCCAAG‑CCCCCTAAAGCACGCGCTGCGAACGACGATATAATGCAGATCCCGcccgccacaaatc                                                                                                   >  2:834046/1‑276 (MQ=255)
                                                                                                                                                                                 aaaGAACTTTTTGATTACCTACAGCAACAATGTGCGGTCCAGATAATCAAAAGCTTCGACATTGAAATTCAACATATCAAGCGCCTGAGCAGCGATATCGGCAGAGAGGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACCCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTcc                                                                                                <  2:1732118/289‑1 (MQ=255)
                                                                                                                                                                                    aaaCTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGa                                                                                             <  1:274677/288‑1 (MQ=255)
                                                                                                                                                                                        tggtCGATAACCGACGGCAACAATTGTCGATCCCCATAACAGAAGGCTTCTGGATTGACAGTCAACATATGCAGCGCCTGAGCAGCGATATCGGCCGAGATGGTGCCAGCGTGCTTCACTTCGGCGAAATCACG‑CGATCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCAACACTCATCTCAAG‑CCCCATAATGCGTGCGCTGCGACTGATGATATATTGCAGATCCGGCACCTGATAAAAGTCCAGACg                                                                                           <  2:1101752/284‑1 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACgcagc                                                                                                                                                                                                                                        <  1:1203122/145‑1 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGNNAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGc                                                                                       >  1:1022283/1‑289 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcgc                                                                                                                                                                                 <  1:537392/200‑1 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTg                                                                                        >  2:1059716/1‑288 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTAATCACTCATCTCAAG‑CCCCATAAAGCGTGGGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACCCCAGACGtgac                                                                                       >  2:320538/1‑286 (MQ=255)
                                                                                                                                                                                          aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGACATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGc                                                                                       >  1:1702498/1‑289 (MQ=255)
                                                                                                                                                                                           tCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATCTCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGca                                                                                      <  2:1584201/289‑1 (MQ=255)
                                                                                                                                                                                           tCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGca                                                                                      <  1:1784760/289‑1 (MQ=255)
                                                                                                                                                                                            cgctaaCCGCCGGCAACAATTTGCGGTCCAGATAATCGAAACCTTCAGCAACGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGCGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGcac                                                                                     <  2:1653634/284‑1 (MQ=255)
                                                                                                                                                                                            cGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGcac                                                                                     <  1:173849/289‑1 (MQ=255)
                                                                                                                                                                                                  ccGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATAcc                                                                               >  1:362712/1‑289 (MQ=255)
                                                                                                                                                                                                          aacaaTTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACgg                                                                        <  1:958304/288‑1 (MQ=255)
                                                                                                                                                                                                                ttGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCa                                                                 <  1:838466/289‑1 (MQ=255)
                                                                                                                                                                                                                            taACCGAAACCTTCAGCATCGACATTCAACCTAACCAGCGCCTGAGCAGCGATAGCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACggtgatgtca                                                     <  2:155946/289‑9 (MQ=255)
                                                                                                                                                                                                                                  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑Ca                                                                                                                                                                                                                                                   >  2:851501/1‑94 (MQ=255)
                                                                                                                                                                                                                                  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                               >  2:1251605/1‑178 (MQ=255)
                                                                                                                                                                                                                                  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTTCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACCCCAGACGTTGCACAATACCAAAACGGTCGCGCAACgctgaagtcagacaa                                                >  2:1688228/1‑274 (MQ=255)
                                                                                                                                                                                                                                  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                >  1:1566237/1‑284 (MQ=255)
                                                                                                                                                                                                                                  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                >  1:1689994/1‑284 (MQ=255)
                                                                                                                                                                                                                                    aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                >  1:867812/1‑282 (MQ=255)
                                                                                                                                                                                                                                    aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                >  1:1044852/1‑282 (MQ=255)
                                                                                                                                                                                                                                         cAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                        <  1:643894/289‑1 (MQ=255)
                                                                                                                                                                                                                                         cAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                        <  1:315853/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGTAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa                              <  1:1508239/289‑1 (MQ=255)
                                                                                                                                                                                                                                                   aTTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa                              <  1:759724/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        acagagccAGCGCATGGGCGGCGAGTGCTGCCGAGATGGTGCCAGAGTGATTCACTTGGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAAt                         <  2:1771732/283‑1 (MQ=255)
                                                                                                                                                                                                                                                         cATATCCAGCGCCTGGGCAGCGATATCTGCCAGGATGGGTCAATCGTGCTTAACTTCGGCGAAATCACGACAC‑CGACGAGGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc                        <  2:1161957/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         cATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc                        <  1:1368510/289‑1 (MQ=255)
                                                                                                                                                                                                                                                          taatCCGGCGCCTGAGCGGCGATATCTGCGAGGATGGGCCCACCGGGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc                        <  2:748744/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                aGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTGGCACCAATCAGGGTaa                 >  2:274786/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGACGTCAGCGAACCTGCCCGCGGGGTTGCCCCAATCAGGGGaa                 >  2:1743702/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                  cgcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                        >  2:793227/1‑264 (MQ=255)
                                                                                                                                                                                                                                                                      tGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCCTGCGCTGCGACTGACGATATCTTGCAGATCCGGCACCTGATAAAACTCCAGCCGTTGCATAATACCAAAACCGTCGCGCAACGGTGATGTCAGCGACCCTGCCCGCGCGGTTCACCCACTCAGGGTAAAccgcg           >  2:113719/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACggcggc         >  1:1649143/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                        agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACggcggc         >  1:1478406/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc    >  1:1755985/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                        
CGGCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAAAGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACG‑CACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAG‑CCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAA  >  CP042583/1625097‑1625656

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A