Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,625,376 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,625,3760GC100.0% 576.0 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/0);  new base C (137/107);  total (137/107)
*CP0425831,625,3770CG98.8% 561.2 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/1);  new base G (135/106);  total (137/107)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,625,3780TA98.8% 554.3 / NA 244intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (137/104);  minor base G (0/3);  total (137/107)
Fisher's exact test for biased strand distribution p-value = 8.30e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 244 total aligned reads displayed.

CGGCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATC  >  CP042583/1625097‑1625654
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
 ggCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTg                                                                                                                                                                                                                                                                               >  2:653765/1‑288 (MQ=255)
                    tGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGACTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGc                                                                                                                                                                                                                                                           <  1:1850094/289‑1 (MQ=255)
                              aTTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGc                                                                                                                                                                                                                                                 >  1:1690171/1‑289 (MQ=255)
                              aTTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGc                                                                                                                                                                                                                                                 >  1:1338091/1‑289 (MQ=255)
                               ttCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCa                                                                                                                                                                                                                                                <  1:541416/289‑1 (MQ=255)
                                tCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCACCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCa                                                                                                                                                                                                                                                >  2:174909/1‑288 (MQ=255)
                                                          ccACGAGGTGTAAGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAAACGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATgc                                                                                                                                                                                                                     <  2:812173/289‑1 (MQ=255)
                                                             cgcgGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGcgcg                                                                                                                                                                                                                  >  1:1027062/1‑289 (MQ=255)
                                                             cgcgGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTACGGACCATATAATCGAAACCTTCAGCACCGACATTCAACATCTCCCGCGCCTGAGCAGCGATATCTGCCGAGATGGACCCATCGATCTTCACTTCGGCGAAATCACGCACTCGAAGCAGCAGAAGGTTTGCAATGcgcg                                                                                                                                                                                                                  >  2:1917270/1‑289 (MQ=255)
                                                                      cGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACcg                                                                                                                                                                                                          >  2:355867/1‑288 (MQ=255)
                                                                          gCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATAACCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTTCACGCAGAAGACGGTTGGCAATGCGCGGCGCACCGCGac                                                                                                                                                                                                      >  2:1042065/1‑287 (MQ=255)
                                                                            aaaaaGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgcgc                                                                                                                                                                                                   >  2:643435/1‑289 (MQ=255)
                                                                            aaaaaGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgcgc                                                                                                                                                                                                   >  1:1647839/1‑289 (MQ=255)
                                                                            aaaaaGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgcgc                                                                                                                                                                                                   >  1:191006/1‑289 (MQ=255)
                                                                            aaaaaGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAgcgc                                                                                                                                                                                                   >  1:1712795/1‑289 (MQ=255)
                                                                                   cTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGc                                                                                                                                                                                            >  1:817851/1‑289 (MQ=255)
                                                                                     tGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCa                                                                                                                                                                                           >  2:1957163/1‑288 (MQ=255)
                                                                                               actAAGGTCCCAGCCCACCTGCAATGGTTGCACGTGCTTCGCCAATGGCTGCCGCCAGGTTATCAAGACCTACCGGGCCACCAA‑AGAACTTATCGATTACCGCCAGAAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgc                                                                                                                                                                                <  2:1632166/287‑1 (MQ=255)
                                                                                                caaaGGTTCCATCACCTCCTACTAGCTTTCCAGTTCTTCGACAATCGGTGCCACCAGGTTATCACGACCTACAGTTCCACACA‑AGAACTTATCGATTACCGCCAGCAACCATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGGGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAgcgcg                                                                                                                                                                               <  2:1268340/287‑1 (MQ=255)
                                                                                                 tacgggtCCCGCCCATCCCCAAGGGTGTCACGTTCTTCGCCAAGGGCGGCCCCCAGGTTATCCAGACCTAGAGGTTCACCAACAGCA‑TTATCGATGTCCGCAAGCAACAATTCGCGGTGCATGTAATCGAAACCTTCGGCATCGACATTGAACATATCCAGCGCCTGAGCAGCGACATCTGCCGAGATGTTGCCATCGTGTTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAACGCGCGGCGTACCGCGGGCGCGACGAGCAACTTCCAgcgcga                                                                                                                                                                              <  2:488426/283‑2 (MQ=255)
                                                                                                       tCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGtcat                                                                                                                                                                        <  1:756754/289‑1 (MQ=255)
                                                                                                         cAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGCGCAACTTCCAGCCCGCCGgcatc                                                                                                                                                                       >  2:1766094/1‑288 (MQ=255)
                                                                                                             acaTCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACt                                                                                                                                                                    <  1:174909/287‑1 (MQ=255)
                                                                                                                tCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCACCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGCCGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCAtc                                                                                                                                                                >  1:1195702/1‑288 (MQ=255)
                                                                                                                   tCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                            <  1:953232/289‑1 (MQ=255)
                                                                                                                   tCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACATCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                            <  1:399710/289‑1 (MQ=255)
                                                                                                                           ttCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAg                                                                                                                                                           >  2:517962/1‑282 (MQ=255)
                                                                                                                           ttCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATa                                                                                                                                                    >  2:235600/1‑289 (MQ=255)
                                                                                                                            tCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCAt                                                                                                                                                                                                                                                                           <  2:1011639/169‑1 (MQ=255)
                                                                                                                            tCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATaa                                                                                                                                                   >  1:1049601/1‑289 (MQ=255)
                                                                                                                            tCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATaa                                                                                                                                                   >  1:1088593/1‑289 (MQ=255)
                                                                                                                                   cttcGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGCACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGACACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCCAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCCCGCACTCGACGCAGCAGCCGGTTGTCAATCCGCGTCGTACCCAGAGCGCGACGAGCAACTTCCTGCGCGCGGTCATCACTCATCTCAAGCCCCCTCAAGCGtc                                                                                                                                             >  2:1428318/1‑287 (MQ=255)
                                                                                                                                            tGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGtcat                                                                                                                                                                        <  1:628760/252‑1 (MQ=255)
                                                                                                                                            tGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCg                                                                                                                                      >  1:995948/1‑286 (MQ=255)
                                                                                                                                              gCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACCCATCCCAAGCCCCATAAAGCGTGCCCTGCGACTg                                                                                                                                  >  2:1066211/1‑288 (MQ=255)
                                                                                                                                               cTGCCGCCAGTTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                 <  1:1949691/288‑1 (MQ=255)
                                                                                                                                                tGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGAc                                                                                                                                <  1:318548/288‑1 (MQ=255)
                                                                                                                                                tGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACg                                                                                                                               <  2:390837/289‑1 (MQ=255)
                                                                                                                                                  ccgccAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCCCAAGCCCCATCAAGCGTACCCTGCGACTGACGat                                                                                                                             >  2:1062969/1‑289 (MQ=255)
                                                                                                                                                   cgccAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGcgac                                                                                                                                                                                                >  2:1886709/1‑221 (MQ=255)
                                                                                                                                                   cgccAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGcgac                                                                                                                                                                                                <  1:1886709/221‑1 (MQ=255)
                                                                                                                                                      cAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGata                                                                                                                            <  2:1690171/286‑1 (MQ=255)
                                                                                                                                                                  aCCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGtcat                                                                                                                                                                        <  1:66508/230‑1 (MQ=255)
                                                                                                                                                                  aCCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGtcat                                                                                                                                                                        >  2:66508/1‑230 (MQ=255)
                                                                                                                                                                  aCCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCCCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGc                                                                                                             >  2:897320/1‑289 (MQ=255)
                                                                                                                                                                     tACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCAcc                                                                                                          <  1:653765/289‑1 (MQ=255)
                                                                                                                                                                       cAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTg                                                                                                        >  2:1141667/1‑289 (MQ=255)
                                                                                                                                                                       cAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGAGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCCCACGCCCCATACAGCGTGCGCTGCCACTGCCGACATATTTCATATCCGGCCCCTg                                                                                                        >  2:1347150/1‑289 (MQ=255)
                                                                                                                                                                          gTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCCCAAGCCCCATAAAGCGTGCCCTGCGACTGACGAAATATTGAAGATCCGGCACCTGATa                                                                                                     >  2:1710853/1‑289 (MQ=255)
                                                                                                                                                                           tCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATa                                                                                                     <  2:1338091/288‑1 (MQ=255)
                                                                                                                                                                            ccaccaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGa                                                                                                                                 <  2:424101/259‑1 (MQ=255)
                                                                                                                                                                            ccaccaA‑AGAACTTATCGATTACCGCCAGAAACAACTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAG‑AGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATaaa                                                                                                   <  1:942158/288‑1 (MQ=255)
                                                                                                                                                                             caccaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATaaa                                                                                                   >  2:530761/1‑288 (MQ=255)
                                                                                                                                                                              accaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCTAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACCTCCAGCGCGCCGTCATCACTCATCTCAACCCCCAAAAAGCGTTCGCTGCGACCGACGATAGTTTGCAGATCCGGCCCCTTACaaaa                                                                                                  >  2:1908677/1‑288 (MQ=255)
                                                                                                                                                                              accaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                            <  2:1569648/230‑1 (MQ=255)
                                                                                                                                                                              accaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATaaa                                                                                                   >  1:1886005/1‑287 (MQ=255)
                                                                                                                                                                               ccaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAAc                                                                                                 >  1:1897242/1‑288 (MQ=255)
                                                                                                                                                                               ccaA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAAc                                                                                                 >  1:1630583/1‑288 (MQ=255)
                                                                                                                                                                                       aCTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACg                                                                                         <  1:1062969/289‑1 (MQ=255)
                                                                                                                                                                                        cTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAAACACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCa                                                                                                            <  1:47470/269‑1 (MQ=255)
                                                                                                                                                                                           aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATa                                                                                                     >  2:1605967/1‑273 (MQ=255)
                                                                                                                                                                                           aTCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGc                                                                                     >  2:1643915/1‑289 (MQ=255)
                                                                                                                                                                                            tCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGca                                                                                    <  1:1066211/289‑1 (MQ=255)
                                                                                                                                                                                                   ccGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGc                                                                                                                                                          <  2:949262/212‑1 (MQ=255)
                                                                                                                                                                                                   ccGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATAcc                                                                             >  2:1176470/1‑289 (MQ=255)
                                                                                                                                                                                                     gCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGa                                                                                                                                     <  2:1896050/231‑1 (MQ=255)
                                                                                                                                                                                                       cAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCaaaa                                                                         <  1:235600/289‑1 (MQ=255)
                                                                                                                                                                                                          caacaaTTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACgg                                                                      >  1:590577/1‑289 (MQ=255)
                                                                                                                                                                                                          caaaaaTTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACgg                                                                      <  1:1421267/289‑1 (MQ=255)
                                                                                                                                                                                                                 ttGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCa                                                               <  1:1571941/289‑1 (MQ=255)
                                                                                                                                                                                                                    cGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACg                                                            >  2:1591323/1‑289 (MQ=255)
                                                                                                                                                                                                                                tggAAACCGTCAGCGTCGACATTCAACATATCCGGCGCCGGGGCAGCGATATCGGCCGAGATGGGGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcg                                                <  2:318681/287‑3 (MQ=255)
                                                                                                                                                                                                                                 cGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGAc                                                                                                                                    <  2:1876653/204‑1 (MQ=255)
                                                                                                                                                                                                                                 cGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCt                                                                                                         >  2:529119/1‑231 (MQ=255)
                                                                                                                                                                                                                                 cGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCt                                                                                                         <  1:529119/231‑1 (MQ=255)
                                                                                                                                                                                                                                 cGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcga                                               >  1:1725187/1‑286 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTc                                                                                                                                                                   <  2:873338/171‑1 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCaa                                                                                                                                                            <  1:836428/178‑1 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGc                                                                                                                      >  2:1713353/1‑216 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGca                                                                                    <  2:110608/250‑1 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGca                                                                                    >  1:110608/1‑250 (MQ=255)
                                                                                                                                                                                                                                   aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                              >  1:494933/1‑284 (MQ=255)
                                                                                                                                                                                                                                     aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaacc                                            >  2:345618/1‑282 (MQ=255)
                                                                                                                                                                                                                                     aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                              >  1:1011348/1‑282 (MQ=255)
                                                                                                                                                                                                                                     aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                              >  1:4509/1‑282 (MQ=255)
                                                                                                                                                                                                                                          cAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                      <  1:1169828/289‑1 (MQ=255)
                                                                                                                                                                                                                                          cAGCACCGACATTCAACCGATCCAGCGCCTGGGCATCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                      <  2:955972/289‑1 (MQ=255)
                                                                                                                                                                                                                                               tCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                 <  1:326989/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     ttCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGcagcag                                                                                                                                                                                                                                   >  1:363009/1‑89 (MQ=255)
                                                                                                                                                                                                                                                              tCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTcc                                                                                              >  2:197107/1‑213 (MQ=255)
                                                                                                                                                                                                                                                              tCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTcc                                                                                              <  1:197107/213‑1 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa                            >  1:1384773/1‑275 (MQ=255)
                                                                                                                                                                                                                                                                  gcgcCTGAGCAGCGATATCGGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa                            <  2:1384773/275‑1 (MQ=255)
                                                                                                                                                                                                                                                                    gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACggtgat                                                       >  2:1791927/1‑242 (MQ=255)
                                                                                                                                                                                                                                                                    gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                 >  2:1158257/1‑268 (MQ=255)
                                                                                                                                                                                                                                                                    gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                 <  1:1158257/268‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                      <  2:1377620/259‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                      >  1:1377620/1‑259 (MQ=255)
                                                                                                                                                                                                                                                                        gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCCCGTGGTTGCCCCAAACAGGGTAAAcgggcg        >  2:795207/1‑286 (MQ=255)
                                                                                                                                                                                                                                                                         agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACggcggc       >  1:129449/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                    
CGGCATTTCTGGCGGCGTTATGCCAAAGTGATTCCACGCCCGCGTCGTCGCCATACGCCCACGCGGTGTACGCTGCAAAAAGCCTTGCTGAATCAAATAAGGTTCCAGCACATCCTCAATGGTTTCACGTTCTTCGCCAATGGCTGCCGCCAGGTTATCCAGACCTACAGGTCCACCAA‑AGAACTTATCGATTACCGCCAGCAACAATTTGCGGTCCATATAATCGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATC  >  CP042583/1625097‑1625654

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A