Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,638,305 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,638,3050AT99.6% 599.4 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (122/128);  minor base C (1/0);  total (123/128)
Fisher's exact test for biased strand distribution p-value = 4.90e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,638,3060CG100.0% 596.8 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base G (123/128);  total (123/128)
*CP0425831,638,3070TA99.6% 593.6 / NA 251intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (122/127);  total (123/128)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 251 total aligned reads displayed.

CGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACACTAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGGCTGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTAT  >  CP042583/1638029‑1638583
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                    
cGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATTGTCGCCAGTAGTAACCGAAGTAGCgg                                                                                                                                                                                                                                                                              >  2:552730/1‑287 (MQ=255)
cGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCgg                                                                                                                                                                                                                                                                              >  1:80924/1‑287 (MQ=255)
    tGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTg                                                                                                                                                                                                                                                                          >  1:1897174/1‑287 (MQ=255)
    tGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTGTGAAAGGATAAATATGTTCGCCATTAGTAACTGAAGCAGCGGCCTg                                                                                                                                                                                                                                                                          >  2:1896358/1‑287 (MQ=255)
            ttgattgCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCa                                                                                                                                                                                                                                                                  >  1:1354839/1‑287 (MQ=255)
                        ttCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGACGTAGCGGACTGAATTTCCCGCTCATTGGCcgcg                                                                                                                                                                                                                                                    >  2:920130/1‑289 (MQ=255)
                             cAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCTCCGCGTTGTc                                                                                                                                                                                                                                               >  1:1840621/1‑289 (MQ=255)
                              aGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGCCTTTCCAGCTCATGCGCCCCGTTTTCa                                                                                                                                                                                                                                              >  2:1875026/1‑289 (MQ=255)
                                   gCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCAt                                                                                                                                                                                                                                         >  1:856186/1‑289 (MQ=255)
                                                tgaaGTGAGCGACTTGATACCTGCTTCACTGAATGTGTCTAGCGTCATCCGTTGACCGGCCGCAAGGTAGAGCGTGTTTTCACTGCCCTTCAATTGATAACCCTGCAACAGAACGACCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGGAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGGGTTGTCATCCATTTTTATTTCTGGc                                                                                                                                                                                                                            <  2:395817/286‑1 (MQ=255)
                                                tACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGc                                                                                                                                                                                                                            <  1:890661/289‑1 (MQ=255)
                                                      gAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGaaaa                                                                                                                                                                                                                      >  2:697044/1‑289 (MQ=255)
                                                        gcgcCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATg                                                                                                                                                                                                                    >  1:1395680/1‑289 (MQ=255)
                                                             ttGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCaa                                                                                                                                                                                                               >  2:1231386/1‑289 (MQ=255)
                                                              tgctACCTTCTTCACTTACTGTGGCTCGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAAt                                                                                                                                                                                                              <  2:1794035/286‑1 (MQ=255)
                                                              tGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAAt                                                                                                                                                                                                              <  1:1332414/289‑1 (MQ=255)
                                                              tGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAAt                                                                                                                                                                                                              <  1:1777004/289‑1 (MQ=255)
                                                                      tcttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTAt                                                                                                                                                                                                      >  2:591162/1‑289 (MQ=255)
                                                                      tcttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTAt                                                                                                                                                                                                      >  1:111730/1‑289 (MQ=255)
                                                                      tcttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTAGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTAt                                                                                                                                                                                                      >  2:363476/1‑289 (MQ=255)
                                                                       cttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATACCCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATg                                                                                                                                                                                                     <  1:741373/289‑1 (MQ=255)
                                                                       cttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATg                                                                                                                                                                                                     <  1:747076/289‑1 (MQ=255)
                                                                        ttcACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATg                                                                                                                                                                                                     >  1:1494143/1‑288 (MQ=255)
                                                                          caattaaggggggcaGCGCAAGGCGTTTACCGGCCGCAGGGTGAGGCATGTTTTCACTGCCCTGCATTTGATAACACTGCAACAGAACGATGGGCTGTTTGCCACGGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTGATCCATTTTTATTTCTGGCGGAAAATTGGCAATGCCTTTATGACa                                                                                                                                                                                                  <  2:1686092/275‑1 (MQ=255)
                                                                          cACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACa                                                                                                                                                                                                  <  2:527348/289‑1 (MQ=255)
                                                                          cACTTAATGGGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACa                                                                                                                                                                                                  <  1:1406802/289‑1 (MQ=255)
                                                                            cTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAAt                                                                                                                                                                                                <  1:407912/289‑1 (MQ=255)
                                                                            cTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAAt                                                                                                                                                                                                <  1:60858/289‑1 (MQ=255)
                                                                              tAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGACAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGTCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCTGAACATGTGCAATGACTCTATTACAATCg                                                                                                                                                                                              >  2:1225688/1‑289 (MQ=255)
                                                                               aaTGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGa                                                                                                                                                                                             >  1:318715/1‑289 (MQ=255)
                                                                                 tgtgGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCCCGCCTATGTGAGAAGTTTTGAAAGGAGAAATATGTGCGCCATTAGTAACTGAAGTAGTGGCCTGACTTTCCAGCTTATGCGCCGCGTCGTCATCCATTTTTATTTCTGGCCGATAATGGCCAATGCCTTTTTGACAATCGATa                                                                                                                                                                                           >  2:622393/1‑289 (MQ=255)
                                                                                 tgtgGCTAGCGCCAGCCGTTGACCTGCCCCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGGTTTGAAAGGATAAATCTGTGCTCCATTAGTAACTGAAGTAGGCGCCTTACTTTCCCACTCATGCTCCGCCTTGTCATCCATTTTTATTTCTGCCGGAAAATGGGCAATGCCTTTATGCAAATCGac                                                                                                                                                                                            >  2:170715/1‑287 (MQ=255)
                                                                                  gtgGCTTGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATAc                                                                                                                                                                                          <  2:1339184/289‑1 (MQ=255)
                                                                                  gtgGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATAc                                                                                                                                                                                          <  1:1169492/289‑1 (MQ=255)
                                                                                         gcgcCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTc                                                                                                                                                                                   >  2:302532/1‑289 (MQ=255)
                                                                                               gCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGt                                                                                                                                                                              >  1:1423657/1‑288 (MQ=255)
                                                                                                    tGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCtttt                                                                                                                                                                        >  1:249553/1‑289 (MQ=255)
                                                                                                          gccgccAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCtt                                                                                                                                                                  >  2:1371883/1‑289 (MQ=255)
                                                                                                             gccGGGTAGTGCGTGTTTTCCCTTCCCTGCATTTGATAACCCTGCAACGGAACGGTCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGt                                                                                                                                                               <  2:1494143/289‑1 (MQ=255)
                                                                                                                      agCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGACAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCt                                                                                                                                                                   >  1:1609906/1‑276 (MQ=255)
                                                                                                                      agCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCAttt                                                                                                                                                      >  2:1816409/1‑289 (MQ=255)
                                                                                                                           gtTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTgc                                                                                                                                                 >  1:1049387/1‑289 (MQ=255)
                                                                                                                            ttttCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTgcg                                                                                                                                                <  2:1423657/289‑1 (MQ=255)
                                                                                                                             tttCACTGCCCTGCTTTTGATAACCATGCAACAGAACGATCGGCTGTTTGCCACTGGCAGCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTgcg                                                                                                                                                <  1:1215942/288‑1 (MQ=255)
                                                                                                                             tttCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTgcg                                                                                                                                                <  1:1795069/288‑1 (MQ=255)
                                                                                                                                     cccTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTc                                                                                                                                         >  2:1579342/1‑287 (MQ=255)
                                                                                                                                     cccTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGCCATCAATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGAAAAAGTTTTCGCTGTCCTTTTTTACTTGGGTATGCATTTTCGGCGAAGAtgc                                                                                                                                         >  2:1191292/1‑285 (MQ=255)
                                                                                                                                        tGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACttt                                                                                                                                    >  1:1027085/1‑289 (MQ=255)
                                                                                                                                           aTTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAGTATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcg                                                                                                                                 <  2:214037/289‑3 (MQ=255)
                                                                                                                                           aTTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcg                                                                                                                                 <  2:1781866/289‑3 (MQ=255)
                                                                                                                                           aTTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcg                                                                                                                                 <  1:1128279/289‑3 (MQ=255)
                                                                                                                                              tGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcgagg                                                                                                                              <  2:898022/289‑6 (MQ=255)
                                                                                                                                               gATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcgaggc                                                                                                                             >  2:1434768/1‑283 (MQ=255)
                                                                                                                                                 tAACCCTGCAACAAAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAGATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcgaggca                                                                                                                            <  1:157712/288‑8 (MQ=255)
                                                                                                                                                    cccTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcgaggca                                                                                                                            <  2:836059/285‑8 (MQ=255)
                                                                                                                                                    cccTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcgaggca                                                                                                                            >  1:836059/1‑278 (MQ=255)
                                                                                                                                                      cTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATcc                                                                                                                      <  2:1027085/289‑1 (MQ=255)
                                                                                                                                                        gCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCAt                                                                                                                    <  1:552730/289‑1 (MQ=255)
                                                                                                                                                         cAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACa                                                                                                                                                                                                  <  1:1448974/210‑1 (MQ=255)
                                                                                                                                                         cAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACa                                                                                                                                                                                                  >  2:1448974/1‑210 (MQ=255)
                                                                                                                                                               aaCGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCa                                                                                                             >  2:73702/1‑289 (MQ=255)
                                                                                                                                                                   aTCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAg                                                                                                         >  2:847686/1‑289 (MQ=255)
                                                                                                                                                                         tGTTTGCCACTTGCATCAAGGAAGGTGAGATCGGTTCCAGGATGTACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGc                                                                                                   <  2:1403195/289‑1 (MQ=255)
                                                                                                                                                                             tGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCg                                                                                                                                                                                  <  1:1194225/206‑1 (MQ=255)
                                                                                                                                                                                cagctgcagccacgatgGTGAGATGTGTTACAGGATTTACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAGCTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACg                                                                                            <  2:1401047/278‑1 (MQ=255)
                                                                                                                                                                                  cttgCATCAACGACGGTGAGATCGGTTCCAGGAATAACGGTAGCCAGCTCGCCTATGTGGGAAGTTTTGGAAGGATAAATATGGGCGCCATTAGTAACTGAAGTAGCGGCCTGACGTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc                                                                                          <  2:1836642/286‑1 (MQ=255)
                                                                                                                                                                                  cTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCTCGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc                                                                                          <  1:1235857/289‑1 (MQ=255)
                                                                                                                                                                                  cTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc                                                                                          <  2:160968/289‑1 (MQ=255)
                                                                                                                                                                                  cTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc                                                                                          <  1:669120/289‑1 (MQ=255)
                                                                                                                                                                                  cTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGc                                                                                          <  1:1805106/289‑1 (MQ=255)
                                                                                                                                                                                   tGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCa                                                                                         <  2:200263/289‑1 (MQ=255)
                                                                                                                                                                                     gCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACg                                                                                            >  1:1762212/1‑284 (MQ=255)
                                                                                                                                                                                               cgGTTAGTTCGGTTCCAGGAGTCACGGTCGCCAGCTCCGCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCTCGTTGTCGTCCATTTTTATTTCTGGCGGAAAATGTGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGTCAACTACGGCACGTTGCAGAGt                                                                              <  2:1246407/288‑1 (MQ=255)
                                                                                                                                                                                               cgGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTc                                                                             >  1:1187238/1‑289 (MQ=255)
                                                                                                                                                                                                   gagaTCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGACACGTTGCAGAGTCAGt                                                                          <  1:591162/288‑1 (MQ=255)
                                                                                                                                                                                                            tCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAAt                                                                <  1:729391/289‑1 (MQ=255)
                                                                                                                                                                                                            tCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAAt                                                                <  2:1049387/289‑1 (MQ=255)
                                                                                                                                                                                                                  atttccGGTAGCCAGCTCGCCTATGTGGGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCttt                                                           <  2:856186/283‑1 (MQ=255)
                                                                                                                                                                                                                  aTTCACTGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCTCCATTAGTAACTGAAGTATCGGCCTGACTTTCCAGCTCATGCTCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGTCAATGCCTTTATTACAATCTATACAGGTTTCTCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCttt                                                           <  1:1240277/288‑1 (MQ=255)
                                                                                                                                                                                                                  aTTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCttt                                                           <  1:363476/288‑1 (MQ=255)
                                                                                                                                                                                                                  aTTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCttt                                                           <  2:318715/288‑1 (MQ=255)
                                                                                                                                                                                                                     cACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCAt                                                       >  1:197887/1‑289 (MQ=255)
                                                                                                                                                                                                                      aCGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATa                                                      <  1:1816409/289‑1 (MQ=255)
                                                                                                                                                                                                                             ccAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTgcg                                                                                                                                                <  1:927024/192‑1 (MQ=255)
                                                                                                                                                                                                                               aGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTAAGTGGCTTTTAATTCTTTCCATACTGTTTCg                                              >  1:1629227/1‑288 (MQ=255)
                                                                                                                                                                                                                                 cTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGcc                                           >  2:748152/1‑289 (MQ=255)
                                                                                                                                                                                                                                  tCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGcc                                           <  1:1703021/288‑1 (MQ=255)
                                                                                                                                                                                                                                      cTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcg                                                                                                                                 <  1:573769/198‑3 (MQ=255)
                                                                                                                                                                                                                                      cTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgcg                                                                                                                                 >  2:573769/1‑196 (MQ=255)
                                                                                                                                                                                                                                      cTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCAttt                                       >  1:1341954/1‑288 (MQ=255)
                                                                                                                                                                                                                                           tgAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGGCAGTGGCTTTTAATTCTTTCCCTACTGTTTCGGCTATTTCCTGGc                                 >  2:1096603/1‑289 (MQ=255)
                                                                                                                                                                                                                                               aaGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATg                             >  1:1742391/1‑289 (MQ=255)
                                                                                                                                                                                                                                                aGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGAt                              <  1:1875026/287‑1 (MQ=255)
                                                                                                                                                                                                                                                    ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCa                                                                                         >  2:1470573/1‑224 (MQ=255)
                                                                                                                                                                                                                                                    ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCa                                                                                         <  1:1470573/224‑1 (MQ=255)
                                                                                                                                                                                                                                                    ttGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCt                         >  2:1600587/1‑288 (MQ=255)
                                                                                                                                                                                                                                                     tGAAAGGATAAATATGTGCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCt                         >  1:979097/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                     tgCGCCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTtgc                                                                                                                                  >  2:1176233/1‑165 (MQ=255)
                                                                                                                                                                                                                                                                      gcgcCATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTc           >  1:1889233/1‑284 (MQ=255)
                                                                                                                                                                                                                                                                          cATTAGTAACTGAAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGCGAGGCAATATCCATGGCATCAAAAGAATGGc                                                                                                   >  2:135321/1‑192 (MQ=255)
                                                                                                                                                                                                                                                                                    |||                                                                                                                                                                                                                                                                                    
CGCCTGACGCCATTGATTGCCGTATTCGTCAGCCTGCCATTCCCCGTTTACAGTGAGCGCCTTGATACCTTCTTCACTTAATGTGGCTAGCGCCAGCCGTTGACCTGCCGCCAGGTAGAGCGTGTTTTCACTGCCCTGCATTTGATAACCCTGCAACAGAACGATCGGCTGTTTGCCACTGGCATCAACGACGGTGAGATCGGTTCCAGGATTCACGGTAGCCAGCTCGCCTATGTGAGAAGTTTTGAAAGGATAAATATGTGCGCCATTAGTAACACTAGTAGCGGCCTGACTTTCCAGCTCATGCGCCGCGTTGTCATCCATTTTTATTTCTGGCGGAAAATGGGCAATGCCTTTATGACAATCGATACAGGTTTCGCTGTCCTTTTGTGCTTTGTTATGCATTTTCTGCGCAGATTCACTTTGGCTGGCAATATCCATGGCATCAAAAGAATGGCAACTACGGCACGTTGCAGAGTCAGTGGCTTTTAATTCTTTCCATACTGTTTCGGCCATTTCCTGGCGATGAGCTTCGAACTTATCGTCACTGTCTAT  >  CP042583/1638029‑1638583

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A