Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A4 F210 I1 R1 4930 262.8 3829204 96.6% 3699011 272.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,647,392 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,647,3920GC99.5% 491.2 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (96/112);  total (98/112)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,647,3930CG99.5% 485.1 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (96/112);  minor base A (1/0);  total (98/112)
Fisher's exact test for biased strand distribution p-value = 4.64e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,647,3940TA100.0% 489.5 / NA 210intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (98/112);  total (98/112)

Only 100 of 210 total aligned reads displayed.

GCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑AACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAAT  >  CP042583/1647114‑1647664
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                               
  tttACCGTCTGAAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAAtt                                                                                                                                                                                                                                                                       >  1:1865370/1‑289 (MQ=255)
     aCCGTCAGAAAGGGTGTCAGCCAGCCCTAGAACAATCTGCAGCGTTGCCAAGGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACCAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGcc                                                                                                                                                                                                                                                                    <  2:1513173/289‑1 (MQ=255)
       cgtctgaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCAACAGCCACCAACCCCGACATGGAAATTGcaaa                                                                                                                                                                                                                                                                  >  2:1913592/8‑286 (MQ=255)
         tctgaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAgg                                                                                                                                                                                                                                                                 >  1:525470/6‑288 (MQ=255)
           tgaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGccc                                                                                                                                                                                                                                                              <  1:141532/286‑1 (MQ=255)
            gaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCa                                                                                                                                                                                                                                                             <  1:462834/287‑1 (MQ=255)
            gaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCa                                                                                                                                                                                                                                                             >  1:1513173/3‑289 (MQ=255)
              aaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCaa                                                                                                                                                                                                                                                            <  1:1846359/288‑1 (MQ=255)
              aaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAAc                                                                                                                                                                                                                                                           <  2:1249472/289‑1 (MQ=255)
                tgatgTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACCAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAAc                                                                                                                                                                                                                                                           >  1:561021/1‑287 (MQ=255)
                    gTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACTCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGATAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGGCAAAGTAACCGGAACAGAGGCACAACAACATGCCCCAAGCCCACATCCCCTACCTGGAAATTACAAGGCCCAAcccactc                                                                                                                                                                                                                                                     >  2:1495696/1‑285 (MQ=255)
                      aCGCGAGAACTCCAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATGTCTTTTCAGGTTGGCGATAACAAAGCCATTGACCAGGCCACAGGTAACGCCCAGCAACAACCCCGCGGCCACGCCAATCCACAGGCTTTCAGGCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGGACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCa                                                                                                                                                                                                                                                    <  2:1375143/288‑1 (MQ=255)
                       cGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCata                                                                                                                                                                                                                                                  >  2:1852693/1‑289 (MQ=255)
                       cGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCata                                                                                                                                                                                                                                                  >  2:136747/1‑289 (MQ=255)
                       cGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCACCGACATGGAAATTGCCAGGCACAACCCTTTCata                                                                                                                                                                                                                                                  >  2:749882/1‑289 (MQ=255)
                             aCCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATg                                                                                                                                                                                                                                            >  1:286580/1‑289 (MQ=255)
                                 cGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCCGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGaaa                                                                                                                                                                                                                                                                         <  2:1516399/256‑1 (MQ=255)
                                        tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCTATTACGGAGGCGACAGAAAGGTCAACGTCACCGGAAGCGAGGCAGAACAACCTGCCACAAGCACCCATCCCAGAACTGGAAATTCCCAGGCCAAACCCTTTCATATTAATGAAGGTGGCaaa                                                                                                                                                                                                                                 >  2:1468128/1‑289 (MQ=255)
                                        tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCaaa                                                                                                                                                                                                                                 >  1:21937/1‑289 (MQ=255)
                                        tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCaaa                                                                                                                                                                                                                                 >  2:726853/1‑289 (MQ=255)
                                                  tGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAACTTGCCAGGCCCAACCCTTCCATATTAATGAAGGAGGCAAAATTGGGGACa                                                                                                                                                                                                                       >  2:630120/1‑289 (MQ=255)
                                                       aTGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCACAACCCTTTCATATTAATTAAGGTGGCAAAATTTGGGAAAACAAt                                                                                                                                                                                                                  >  2:1663069/1‑289 (MQ=255)
                                                            gtttcgagacCATTTATTTTCAGTTTGGCTGTCACAACGCCATTGACCAAGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCCATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGAACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATCCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATCTTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             <  2:865117/283‑1 (MQ=255)
                                                            gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             >  2:898908/1‑289 (MQ=255)
                                                            gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             <  1:1014076/289‑1 (MQ=255)
                                                            gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCAAAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGCGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             <  1:707443/289‑1 (MQ=255)
                                                             tGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             <  2:1733110/288‑1 (MQ=255)
                                                                tCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAgg                                                                                                                                                                                                          <  1:1375582/288‑1 (MQ=255)
                                                                tCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTAAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAgg                                                                                                                                                                                                          <  1:1105963/288‑1 (MQ=255)
                                                                 cAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACCGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACCGGCg                                                                                                                                                                                                        <  1:955207/289‑1 (MQ=255)
                                                                   gagCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGAt                                                                                                                                                                                                      >  1:689867/1‑289 (MQ=255)
                                                                    agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGcc                                                                                                                                                                                                                                                                    >  2:1007116/1‑226 (MQ=255)
                                                                    agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATa                                                                                                                                                                                                     >  2:460412/1‑289 (MQ=255)
                                                                    agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATa                                                                                                                                                                                                     >  1:304854/1‑289 (MQ=255)
                                                                    agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATa                                                                                                                                                                                                     >  1:83151/1‑289 (MQ=255)
                                                                      cATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCat                                                                                                                                                                                                                                                   <  2:831106/241‑1 (MQ=255)
                                                                         ttatttTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                             >  1:686868/1‑276 (MQ=255)
                                                                          tatttTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGc                                                                                                                                                                                               <  1:604926/289‑1 (MQ=255)
                                                                              ttCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACCTGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGTTGGCAACATTTGGGACAAAAATGGCGCAGGCGAAAAAAATCAcg                                                                                                                                                                                            >  2:1347886/1‑287 (MQ=255)
                                                                              ttCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCAcc                                                                                                                                                                                            >  2:886898/1‑288 (MQ=255)
                                                                                    ttGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaaa                                                                                                                                                                                       <  1:419230/287‑1 (MQ=255)
                                                                                     tGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAacac                                                                                                                                                                                    <  1:1604967/289‑1 (MQ=255)
                                                                                          aTAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACAccacca                                                                                                                                                                               <  2:21937/289‑1 (MQ=255)
                                                                                            aaCAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGc                                                                                                                                                                             <  1:1650249/289‑1 (MQ=255)
                                                                                               aaaGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                          <  1:154032/289‑1 (MQ=255)
                                                                                                aaGCCCTTGACCAGGCCACAGAGAACGCCCAGCCACAACCCCGCGGCCACGACAATCCACAGGCTTTCAGTCAGGGTAATAACCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                          <  2:40527/289‑1 (MQ=255)
                                                                                                         aCCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                          <  1:240886/279‑1 (MQ=255)
                                                                                                         aCCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGAAAAAGAGCACCGCAAACACCACCAGCAAGCCGTACCGa                                                                                                                                                                 >  2:1121322/1‑288 (MQ=255)
                                                                                                                   agagAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGTAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAACAGCACCGCAAACCACCCCAGCATGCCGTCCTGAt                                                                                                                                                                >  2:240886/1‑279 (MQ=255)
                                                                                                                   agagAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTCGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCACACACCACCAGCATGCCGTACTGATCCCAGATAc                                                                                                                                                       >  1:479963/1‑288 (MQ=255)
                                                                                                                     agaACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACAGCAAACACCAGCAGCATCCCGTACGGATCCCAGATACGc                                                                                                                                                     >  2:370754/1‑288 (MQ=255)
                                                                                                                      gaACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGcc                                                                                                                                                    <  1:136747/288‑1 (MQ=255)
                                                                                                                       aaCGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTACAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCACTTACCGCGGCGACCGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATCCCACAAGCCACCACCCCCGACACGGACATTACCAGGCCCAACCCTTCCATACTCATGAACGCGTCACACTTTGCGACACCAAGCGCACAGGCGATAAACAGCACCGCAACCACCACCAACAAGCCTTACTGCTACCAACCACGCCCg                                                                                                                                                  >  2:1526966/1‑289 (MQ=255)
                                                                                                                        aCGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCg                                                                                                                                                  <  2:275362/288‑1 (MQ=255)
                                                                                                                        aCGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGa                                                                                                                                                 >  1:651202/1‑289 (MQ=255)
                                                                                                                        aCGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGa                                                                                                                                                 >  2:687707/1‑289 (MQ=255)
                                                                                                                          gCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGCGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGTAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAACCACCACCACCATACAGTACGGATCCCAGATACGCCCGaa                                                                                                                                                >  2:1777839/1‑288 (MQ=255)
                                                                                                                                      ccccGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGa‑atgacgac                                                                                                                                  <  2:897955/289‑8 (MQ=255)
                                                                                                                                          gCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTAATGATCCCAGATACGCCCGAAGCTGa‑atgccgactaag                                                                                                                              >  2:855317/1‑278 (MQ=255)
                                                                                                                                           cTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGa‑atgacgacttagg                                                                                                                             >  2:1132654/1‑277 (MQ=255)
                                                                                                                                            tGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGa‑atgacgacttaggt                                                                                                                            <  1:1184779/289‑14 (MQ=255)
                                                                                                                                                               cTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGAccccgatgt                                                                                                           <  1:855317/287‑7 (MQ=255)
                                                                                                                                                                       aagGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                  <  2:574749/287‑1 (MQ=255)
                                                                                                                                                                        agGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGcc                                                                                                                                                                                                                                                                    >  1:737429/1‑126 (MQ=255)
                                                                                                                                                                            taataa‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAca                                                                                             <  1:1854208/288‑1 (MQ=255)
                                                                                                                                                                              ataa‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCCACATGCCGGACTGATCCCAGATACGCCAGAAGCTGACAGACGCAC‑TAGGTGCGCCAGACCCCAATGTAGAAAccacataccaca                                                                                          >  2:1021495/1‑278 (MQ=255)
                                                                                                                                                                                aa‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaa                                                                                                 >  1:448915/1‑280 (MQ=255)
                                                                                                                                                                                aa‑CCACCGCCGTGGTAACACCCGAACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCACAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                        <  1:1756983/289‑1 (MQ=255)
                                                                                                                                                                                 a‑ccaccGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                       <  1:370754/289‑1 (MQ=255)
                                                                                                                                                                                 a‑ccaccGCCGTGGTGAAACCCGCACAGGCAATTACGGAGGCGAAAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                       <  2:351985/289‑1 (MQ=255)
                                                                                                                                                                                     accGCCGTGGTGACACCCGCACGGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                     >  2:1089875/1‑288 (MQ=255)
                                                                                                                                                                                     accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCTGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                     >  1:895416/1‑288 (MQ=255)
                                                                                                                                                                                     accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                     >  2:1337691/1‑288 (MQ=255)
                                                                                                                                                                                      ccgccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActct                                                                                    >  1:781235/1‑288 (MQ=255)
                                                                                                                                                                                      ccgccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                       >  2:1557744/1‑285 (MQ=255)
                                                                                                                                                                                      ccgccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACtctc                                                                                   <  1:38530/289‑1 (MQ=255)
                                                                                                                                                                                         ccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGcc                                                                                                                                                    >  2:467756/1‑222 (MQ=255)
                                                                                                                                                                                                   acCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaaa                                                                                                                                                                                       >  1:717805/1‑177 (MQ=255)
                                                                                                                                                                                                       gCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTTGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGc                                                                  <  2:714186/289‑1 (MQ=255)
                                                                                                                                                                                                        cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAg                                                                   >  1:1027094/1‑287 (MQ=255)
                                                                                                                                                                                                        cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAg                                                                   >  1:382160/1‑287 (MQ=255)
                                                                                                                                                                                                             gCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTg                                                               >  1:1683256/1‑286 (MQ=255)
                                                                                                                                                                                                               aaTTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTg                                                           >  2:445472/1‑288 (MQ=255)
                                                                                                                                                                                                                       ggcggaaaGAAAGTGCAAAGGCACCGGAAGGGAGCGAGAAAAACAGGCCACAACCCACCATCCCCGACAAGGAAATTGCCAGACCAAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAgg                                                   <  2:1211949/281‑1 (MQ=255)
                                                                                                                                                                                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGc                                                  >  1:1727064/1‑289 (MQ=255)
                                                                                                                                                                                                                         gCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACTAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGa‑atga                                                                                                                                      >  1:1226049/1‑200 (MQ=255)
                                                                                                                                                                                                                            aCAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGc                                             >  2:939575/1‑289 (MQ=255)
                                                                                                                                                                                                                            aCAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGc                                             >  1:200734/1‑289 (MQ=255)
                                                                                                                                                                                                                                  aGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCCCAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCt                                       <  1:8987/289‑1 (MQ=255)
                                                                                                                                                                                                                                  aGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCt                                       <  1:1006195/289‑1 (MQ=255)
                                                                                                                                                                                                                                   ggTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCt                                       <  2:556627/288‑1 (MQ=255)
                                                                                                                                                                                                                                   ggTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACCCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTc                                      >  2:1867539/1‑289 (MQ=255)
                                                                                                                                                                                                                                         attgaCCGAAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGTCATGCCCAACCCTTTCCTATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACATGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAGCAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGACTGACTTTATGCATCGCAAGGCTCAGTGcc                                <  1:1902514/285‑1 (MQ=255)
                                                                                                                                                                                                                                         aGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGcc                                <  1:1337691/289‑1 (MQ=255)
                                                                                                                                                                                                                                            cACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGa                             <  2:486851/289‑1 (MQ=255)
                                                                                                                                                                                                                                                  aaGCGAGGCAGAACAACATGCCACAAGCCACCCTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCCCCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTc                        <  1:1091297/288‑1 (MQ=255)
                                                                                                                                                                                                                                                         gCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATctg                   >  1:1288304/1‑286 (MQ=255)
                                                                                                                                                                                                                                                              acaacaTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑ATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCt             <  1:1477275/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             ccaccaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAacac                                                                                                                                                                                    <  1:468546/106‑1 (MQ=255)
                                                                                                                                                                                                                                                                               accaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTa                                                                                                                                                                     >  1:144048/1‑119 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                               
GCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAA‑CCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGA‑AACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAAT  >  CP042583/1647114‑1647664

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A