Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,647,392 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,647,3920GC99.7% 676.9 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/0);  new base C (138/146);  total (139/147)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.85e-01
*CP0425831,647,3930CG99.7% 672.5 / NA 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (1/0);  new base G (138/146);  total (139/147)
Fisher's exact test for biased strand distribution p-value = 4.88e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,647,3940TA99.7% 680.8 / ‑5.3 286intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (138/147);  minor base . (1/0);  total (139/147)
Fisher's exact test for biased strand distribution p-value = 4.86e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 286 total aligned reads displayed.

CGCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGC  >  CP042583/1647113‑1647672
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
cgCTTTACCGTCTGAAATGCTTTACGCCAGACCTCGACCAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGaa                                                                                                                                                                                                                                                                                 <  2:1459537/289‑1 (MQ=255)
        cgtctgaaaTGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAg                                                                                                                                                                                                                                                                         >  1:43849/8‑289 (MQ=255)
              aaaTGATGTACGCCAGACCTCGAACAATCTGCATAGTTGCCAATGTCGTGATCAGGGCATTGAGTTTCAGTTTGGCAATAACACAGCCATTGACCAGGCCAACGAGAACGACCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGACGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAACGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCa                                                                                                                                                                                                                                                                    <  2:223669/287‑1 (MQ=255)
                    tgTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCttt                                                                                                                                                                                                                                                             <  1:2600235/289‑1 (MQ=255)
                    tgTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCtt                                                                                                                                                                                                                                                              <  2:585408/288‑1 (MQ=255)
                        cgacaggacgcGAGCAATCGGAATAGTTGCCAATGTAGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAACTTGCCAGGCCCAACCCTTTCat                                                                                                                                                                                                                                                          >  1:223669/11‑288 (MQ=255)
                        cGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACCGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCAACCCCGACATGGCAATTGCCAGGCCCAACCACTTCa                                                                                                                                                                                                                                                           >  2:2520401/1‑287 (MQ=255)
                             gACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATCACGGAAGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAAt                                                                                                                                                                                                                                                    >  1:2387837/1‑289 (MQ=255)
                                  cGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTg                                                                                                                                                                                                                                                                             <  2:2010229/259‑1 (MQ=255)
                                  cGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAgg                                                                                                                                                                                                                                               >  2:2226638/1‑289 (MQ=255)
                                  cGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAACGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCACGCCCAACCCTTCCATATGAATAAAgg                                                                                                                                                                                                                                               >  2:2039741/1‑289 (MQ=255)
                                         tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCa                                                                                                                                                                                                                                                           >  2:2570891/1‑270 (MQ=255)
                                         tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCAACCCCGACATGGAAATTGCCAGGCCCAACCCTTGCATCTTAATGAAGTTGGCaaa                                                                                                                                                                                                                                        >  2:681996/1‑289 (MQ=255)
                                         tCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCAGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTACCAGGCACAACCCTTTCATATTAATGAAGGAGGCaaa                                                                                                                                                                                                                                        >  1:1632305/1‑289 (MQ=255)
                                              aTCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCat                                                                                                                                                                                                                                                          <  2:2590398/266‑1 (MQ=255)
                                                       aaTGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAA‑AACCACCGCCGTGGTGACCCCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGACGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACCTGGACATTGCCAGGCCCAAACCTTTCATATTAATGAAGGTGCGAAAATTTAGGCAAAAAAt                                                                                                                                                                                                                         >  2:2170398/1‑289 (MQ=255)
                                                             gTGATGAGATCAATGATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCGCGGGGAGCGCCCGGCTACAGCCCCGATGCCCCGCCAATCCACAGGCTTTAAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    <  2:232022/289‑1 (MQ=255)
                                                             gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCata                                                                                                                                                                                                                                                         <  1:1838966/252‑1 (MQ=255)
                                                             gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    >  2:159757/1‑289 (MQ=255)
                                                             gTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    <  1:670828/289‑1 (MQ=255)
                                                              tGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    <  1:1742898/288‑1 (MQ=255)
                                                                 tCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAgg                                                                                                                                                                                                                 <  1:1753084/288‑1 (MQ=255)
                                                                 tCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAgg                                                                                                                                                                                                                 <  1:681996/288‑1 (MQ=255)
                                                                  cAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGCCACAGGCg                                                                                                                                                                                                               <  2:465737/289‑1 (MQ=255)
                                                                     agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATa                                                                                                                                                                                                            >  1:783424/1‑289 (MQ=255)
                                                                     agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATa                                                                                                                                                                                                            >  2:2364061/1‑289 (MQ=255)
                                                                     agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACCGGCGATa                                                                                                                                                                                                            >  1:232022/1‑289 (MQ=255)
                                                                     agCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCA‑‑‑CCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAACAATGGCACAGGCGATAAag                                                                                                                                                                                                         >  2:154873/1‑289 (MQ=255)
                                                                          ttatatTCAGTTGGGCCATAACAAACCCAGTGACCACGCCCCAGAGACCGCCCAGCAACAACCCCCCTGCCACGCCAATCCACAGGCTTTCCGTCAGGTTAATAACCACCGCCGTGGTGACACCCGAACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAagag                                                                                                                                                                                                       <  2:2097506/289‑1 (MQ=255)
                                                                               ttCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGcc                                                                                                                                                                                                                                                                      <  1:2260482/221‑1 (MQ=255)
                                                                                 cAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGcg                                                                                                                                                                                                <  1:986997/289‑2 (MQ=255)
                                                                                 cAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCa                                                                                                                                                                                                <  1:2426032/289‑1 (MQ=255)
                                                                                     atGGCGATAACAAAGACAGTGACCAGACCACAGAGAACGCCCAGCAAACACCCCGCTGCCACGCCAATCCCCAGGCTTTCAGGCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCaa                                                                                                                                                                                               <  2:1629913/285‑1 (MQ=255)
                                                                                            tAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACAccacca                                                                                                                                                                                      <  1:1559758/288‑1 (MQ=255)
                                                                                            tAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACAccacca                                                                                                                                                                                      <  1:1060500/288‑1 (MQ=255)
                                                                                                       ttGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACt                                                                                                                                                                          <  1:847350/289‑1 (MQ=255)
                                                                                                       ttGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACt                                                                                                                                                                          <  2:783424/289‑1 (MQ=255)
                                                                                                        agACCAGGGCACACAGGACGCCCAGCACCAACCCCGCTGCCACCCCAATCCACAGGCTTTCAGTCAGGTTAATACCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTg                                                                                                                                                                         <  2:2276629/288‑1 (MQ=255)
                                                                                                               gCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAg                                                                                                                                                                  >  2:7337/1‑289 (MQ=255)
                                                                                                                 aacagcgaaatcacAGCAACAACCCCGCTGCCACGCCAATCCCCATGCTTTCAACCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGAt                                                                                                                                                                <  2:1070444/276‑1 (MQ=255)
                                                                                                                    agagAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATAc                                                                                                                                                              >  1:1395604/1‑288 (MQ=255)
                                                                                                                        aaCGCCCAGCAACAACCCCGCTGCCACGCCAATCCAAAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCAGCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTAGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATACCGTACTGATCACAGATACGCCCg                                                                                                                                                         >  1:2032728/1‑289 (MQ=255)
                                                                                                                          cGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCCTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGaa                                                                                                                                                       >  1:1367799/1‑289 (MQ=255)
                                                                                                                           gCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGccc                                                                                                                                                                                                                                                                     <  1:634163/178‑1 (MQ=255)
                                                                                                                             ccAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCa                                                                                                                                                                                                                                                                    <  1:1957342/177‑1 (MQ=255)
                                                                                                                                 caacaaCCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaat                                                                                                                                                <  2:522183/289‑2 (MQ=255)
                                                                                                                                  aacaacCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaat                                                                                                                                                <  1:937040/288‑2 (MQ=255)
                                                                                                                                  aacaacCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaat                                                                                                                                                <  1:1121767/288‑2 (MQ=255)
                                                                                                                                       ccccGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaatgacg                                                                                                                                            >  1:1475368/1‑282 (MQ=255)
                                                                                                                                         ccGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCa                                                                                                                                                                                                                                          >  2:1276584/1‑191 (MQ=255)
                                                                                                                                         ccGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCa                                                                                                                                                                                                                                          <  1:1276584/191‑1 (MQ=255)
                                                                                                                                           gCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGAc                                                                                                                                                                                                                               >  2:402844/1‑200 (MQ=255)
                                                                                                                                            cTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATAACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGGACTGATCCCAGATACCCCCGAAGCCGaatgacgacttagg                                                                                                                                     >  2:2707976/1‑277 (MQ=255)
                                                                                                                                             cgCCACGCCAATACACAGGCTTTCAGTCAGGGTAATAACCAACGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGAAAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCCACAGCCACCATCCCCGACAAGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCAAAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaatgacgacttagg                                                                                                                                     <  2:1706802/287‑13 (MQ=255)
                                                                                                                                              gCCCCGCCAATCCACAGGCTTTACGTCAGGGTAATAACCACCGCCGGGGTGACACCCGGACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCCCCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGaatgacgacttaggtg                                                                                                                                   <  2:794034/289‑15 (MQ=255)
                                                                                                                                               ccACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    <  2:1715814/207‑1 (MQ=255)
                                                                                                                                                                  ttCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGaa                                                                                                               >  1:729972/1‑289 (MQ=255)
                                                                                                                                                                   tcagtcagGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCg                                                                                                                                                         <  1:452647/246‑1 (MQ=255)
                                                                                                                                                                   tcagtcagGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCg                                                                                                                                                         >  2:452647/1‑246 (MQ=255)
                                                                                                                                                                        cagGTTAATAGCCACCGCCGGGGGGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                          <  2:2631304/288‑1 (MQ=255)
                                                                                                                                                                        cagGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                          <  1:1697075/288‑1 (MQ=255)
                                                                                                                                                                        cagGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                          <  1:542219/288‑1 (MQ=255)
                                                                                                                                                                        cagGTTAATAACCACCCCCGTGGTGAAACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                          <  1:2617025/288‑1 (MQ=255)
                                                                                                                                                                            ttAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaag                                                                                                        <  1:2409969/286‑1 (MQ=255)
                                                                                                                                                                            ttAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACagaag                                                                                                        <  1:2138721/286‑1 (MQ=255)
                                                                                                                                                                                taaCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAcatcat                                                                                                 <  1:2520401/289‑1 (MQ=255)
                                                                                                                                                                                 aaCCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATa                                                                                                <  2:174060/289‑1 (MQ=255)
                                                                                                                                                                                  aacaccGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                               <  1:2072851/287‑1 (MQ=255)
                                                                                                                                                                                     accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGcac                                                                                                                                                                                                                    >  2:1178614/1‑169 (MQ=255)
                                                                                                                                                                                     accGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACACCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATActc                                                                                             >  1:768834/1‑288 (MQ=255)
                                                                                                                                                                                      ccgccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACaaa                                                                                                                                                                                                                            >  2:907012/1‑160 (MQ=255)
                                                                                                                                                                                      ccgccgTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCCCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATTACGACTTAGGTACGCCAGACCCCTAAGGAGAAACAGGAGACATCACAccct                                                                                            >  2:703626/1‑288 (MQ=255)
                                                                                                                                                                                                  cacaCGCACAGGCAACTCCGGAGGCGACAGAAATGTGAAAGACAGCGGAAGCGAGGCAGAACAAGCTGCCACAAGCCACCATCCCCGAGATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAATGTGGCAAAATTTGAGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTTCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCa                                                                               <  2:603430/289‑1 (MQ=255)
                                                                                                                                                                                                        cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                                 <  2:1343861/185‑1 (MQ=255)
                                                                                                                                                                                                        cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCACCTTACTCAGGCAACAGc                                                                          >  1:10002/1‑288 (MQ=255)
                                                                                                                                                                                                        cacaGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCAACCATCACCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCAGAATGACGACTTAGGTGCGCCATACCCCGATGTAGAAACAGCAGACATCATACCCACCTTACTCAGGCAACCGc                                                                          >  2:1410907/1‑288 (MQ=255)
                                                                                                                                                                                                             gaacttACGGAGAGGACAGAAGGGTAACAGCACCCGAAAGAGGGGCAAAACAACCTGCCACAAGCCACCAACCCCGACATGGAAATTGACAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCAACAGCGATAAAGACCACCGCAAACACCGCCCGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCACGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                     <  2:956274/284‑1 (MQ=255)
                                                                                                                                                                                                             gCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCaa                                                                                                                                                                                                                                                                   <  1:1737066/98‑1 (MQ=255)
                                                                                                                                                                                                              cAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                     <  1:1220118/287‑1 (MQ=255)
                                                                                                                                                                                                              cAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                     <  1:1802464/287‑1 (MQ=255)
                                                                                                                                                                                                              aaaTTACGGAGGCGACAGAAAGGGCAAAGACACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATGAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCt                                                                    <  1:1931289/287‑1 (MQ=255)
                                                                                                                                                                                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGAc                                                                                                      >  1:1608123/1‑245 (MQ=255)
                                                                                                                                                                                                                       aGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGCGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGc                                                          >  2:1859009/1‑289 (MQ=255)
                                                                                                                                                                                                                       aGGCGAACGAAAGGTAAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGAAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAgg                                                           <  2:768834/288‑1 (MQ=255)
                                                                                                                                                                                                                         gCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCGGAATGACGACTTAGGTCCGCCAGACCCCGATGTAGAAACAGAACGCACCATACTCCCCTTACTCAGCCAACAGCCCGGCCGACTTTACGCAt                                                        >  2:1823072/1‑289 (MQ=255)
                                                                                                                                                                                                                                 aaGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCa                                                    <  1:344737/285‑1 (MQ=255)
                                                                                                                                                                                                                                   ggTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTc                                              >  1:2223071/1‑289 (MQ=255)
                                                                                                                                                                                                                                     tCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTc                                              <  1:2707976/287‑1 (MQ=255)
                                                                                                                                                                                                                                             aCCGGAAGCGGGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                                 >  1:372223/1‑148 (MQ=255)
                                                                                                                                                                                                                                             aCCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATg                                                                                                                                                                                 <  2:372223/148‑1 (MQ=255)
                                                                                                                                                                                                                                                               caacaTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGc                                                                     <  2:1689476/238‑1 (MQ=255)
                                                                                                                                                                                                                                                                  caTGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGACACAGAAGACATCATACTCTCCTTACCCAGGCACCAGCCTGACTGACTTTAGGCCTCGCAAGGCTCAGTTCCTGACGCTCCTctgccatctccttta               >  2:17746/1‑279 (MQ=255)
                                                                                                                                                                                                                                                                    tGCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAAcacc                                                                                                                                                                                          >  2:1390052/1‑116 (MQ=255)
                                                                                                                                                                                                                                                                     gCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACt                                                                                                                                                                          >  1:909588/1‑131 (MQ=255)
                                                                                                                                                                                                                                                                     gCCACAAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCCAGGCCCAGTGCCTGACGCCCATCTGCCTGCTCGTGCAACa            >  2:152312/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       cacaAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACaga                                                                                                          >  1:217971/1‑193 (MQ=255)
                                                                                                                                                                                                                                                                       cacaAGCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTCAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAAt          >  1:256410/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            ggtaccaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCAcc     >  1:2106496/4‑289 (MQ=255)
                                                                                                                                                                                                                                                                            gCCACCATCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCAcc     >  1:1514030/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                               accaTCCCCGACATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAATGACGACTTAGGTGCGCCAGACCCCGATGTAGAAACAGAAGACATCATAc                                                                                               <  2:242503/196‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                      
CGCTTTACCGTCACTAATGATGTACGCCAGACCTCGAACAATCTGCATCGTTGCCAATGTCGTGATCAGAGCATTTATTTTCAGTTTGGCGATAACAAAGCCATTGACCAGGCCACAGAGAACGCCCAGCAACAACCCCGCTGCCACGCCAATCCACAGGCTTTCAGTCAGGTTAATAACCACCGCCGTGGTGACACCCGCACAGGCAATTACGGAGGCGACAGAAAGGTCAAAGTCACCGGAAGCGAGGCAGAACAACATGCCACAAGCCACCATCCCGCTCATGGAAATTGCCAGGCCCAACCCTTTCATATTAATGAAGGTGGCAAAATTTGGGACAAAAATGGCACAGGCGATAAAGAGCACCGCAAACACCACCAGCATGCCGTACTGATCCCAGATACGCCCGAAGCTGAAACTGCTCTTAGGTGCGCCAGACCCGCTTGTAGAAACAGAAGACATCATACTCTCCTTACTCAGGCAACAGCCTGGCTGACTTTAGGCATCGCAAGGCTCAGTGCCTGACGCTCATCTGCCTGCTCGTGTAACAATTCACCGGC  >  CP042583/1647113‑1647672

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A