Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 473,482 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP042583473,4820GC98.3% 396.1 / NA 178intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  major base C (51/121);  minor base A (3/0);  total (55/123)
Fisher's exact test for biased strand distribution p-value = 2.83e-02
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01
*CP042583473,4830CG99.4% 407.4 / NA 178intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (54/122);  minor base A (1/0);  total (55/123)
Fisher's exact test for biased strand distribution p-value = 3.11e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP042583473,4840TA99.4% 414.6 / NA 178intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (53/123);  minor base C (1/0);  total (55/123)
Fisher's exact test for biased strand distribution p-value = 3.05e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.92e-01

Only 100 of 178 total aligned reads displayed.

ATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGG  >  CP042583/473203‑473763
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
  ccGCCAGGTTGGGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAg                                                                                                                                                                                                                                                                                 <  2:1869057/289‑1 (MQ=255)
   cGCCAGGTTCAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGc                                                                                                                                                                                                                                                                                <  1:591369/289‑1 (MQ=255)
         gTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCCCAATACGCTCGATCATATGGTTTAACGGCAGTACCAGCTGTTc                                                                                                                                                                                                                                                                           >  1:1088603/1‑288 (MQ=255)
         gTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCACATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGCCATCCTCCATACGCTCGATCAGATGGTTGAACGCCAGTAACAGCTGTTc                                                                                                                                                                                                                                                                           >  1:463666/1‑288 (MQ=255)
           tGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAg                                                                                                                                                                                                                                                                        <  1:611638/289‑1 (MQ=255)
                aTTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACG‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCaa                                                                                                                                                                                                                                                                   <  1:726163/289‑1 (MQ=255)
                    tcttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATggg                                                                                                                                                                                                                                                               <  1:1733719/289‑1 (MQ=255)
                     cttttcGGGGATTTGCTGGTTGTTTTCGGCCTGAGCGAGAAACAGCATATCGCTTACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGc                                                                                                                                                                                                                                                              <  1:1140803/289‑1 (MQ=255)
                     cttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTCGAACGACAGTACCAGCTGTTCCAGCTCAATGGGc                                                                                                                                                                                                                                                              <  1:115200/289‑1 (MQ=255)
                      ttttcGGGGTTTTGGTGGTGTTTATCGGCAGGCGCAAGAAACAGCATATCGCTGCCAATTTGCGCCATTCGGGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             <  2:1438504/289‑1 (MQ=255)
                      ttttcGGGGATTGGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCGGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             <  1:1401870/289‑1 (MQ=255)
                      ttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             <  1:1354097/289‑1 (MQ=255)
                                         tgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGtt                                                                                                                                                                                                                                                                            <  2:125864/255‑1 (MQ=255)
                                         tgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGtt                                                                                                                                                                                                                                                                            >  1:125864/1‑255 (MQ=255)
                                         tgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCg                                                                                                                                                                                                                                         >  1:719278/1‑289 (MQ=255)
                                          tttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCGGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGa                                                                                                                                                                                                                                        <  1:1377856/288‑1 (MQ=255)
                                          gttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGa                                                                                                                                                                                                                                        <  2:965414/289‑1 (MQ=255)
                                                 gCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             <  2:607608/262‑1 (MQ=255)
                                                 gCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGGGAACGTCga                                                                                                                                                                                                                                 >  1:289384/1‑289 (MQ=255)
                                                     gAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATAAGCTCGATCTTATGGTTGAACGAGAGTACACGCTGTTCCACCCCAATGGGCCCGGTCCGCGGGGC‑GAGGCGAActccgcga                                                                                                                                                                                                                               >  2:661004/1‑280 (MQ=255)
                                                           gaaaagacATATCGCTGACCAGTTTCGCCATTCGCGTCAGCGCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACG‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCtttcg                                                                                                                                                                                                                        <  2:1538150/281‑3 (MQ=255)
                                                           gaACCAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCtttcg                                                                                                                                                                                                                        <  1:1035413/288‑3 (MQ=255)
                                                           gaAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAAGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCtttcga                                                                                                                                                                                                                       >  1:962827/1‑286 (MQ=255)
                                                            aaaCAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTGAAGAAATCCTCAATACCCCTGATCATATGGGTGAACGACAGTAACCACTGTTTCAACCCAATGGGGCCGGGCTGTGGGGCGGAGGCAAAGGT‑GAGGTCtttcgag                                                                                                                                                                                                                      >  2:1785425/1‑285 (MQ=255)
                                                                         cTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGGAATATTCTGGa                                                                                                                                                                                                         >  1:1456158/1‑289 (MQ=255)
                                                                             ccATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACATTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTg                                                                                                                                                                                                     <  1:16891/289‑1 (MQ=255)
                                                                                        aTTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAAACATCCTCAATACCCCCGATCATATGGTTGAACGACAGGACCCGCTGTTCCAGCCCAATTGGCACGGTCTGCGGGGC‑CAGGGCAAGGGCGAGGTCTTTTCGGGTAATATTTCGGATTTTAGGGCTGAcc                                                                                                                                                                                           >  2:1873944/1‑287 (MQ=255)
                                                                                           cgcgTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             <  1:1286686/220‑1 (MQ=255)
                                                                                           cgcgTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa                                                                                                                                                                                                                                                             >  2:1286686/1‑220 (MQ=255)
                                                                                                cAGCTCTTCGAGATTAGGGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGAt                                                                                                                                                                                   <  2:1111570/288‑1 (MQ=255)
                                                                                                 aGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCCCAATACCGTCGAGCATATGGGTGAAAGACAGTACCAGCTGTTCCCGCTCAATGGGCGCGGGCTGCGGGGT‑GCGGGGCACGTCGAGATCTTTCGCGGTGATATTATGGGTTTTGGGGCTGACGCCGGGGGTCg                                                                                                                                                                                 >  2:321165/1‑289 (MQ=255)
                                                                                                      ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGcgcg                                                                                                                                                                            <  1:1238670/289‑1 (MQ=255)
                                                                                                       tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGTGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTT‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  2:383944/289‑1 (MQ=255)
                                                                                                       tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  1:491933/289‑1 (MQ=255)
                                                                                                       tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  1:1307272/289‑1 (MQ=255)
                                                                                                       tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  1:1944151/289‑1 (MQ=255)
                                                                                                       tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  1:1556078/289‑1 (MQ=255)
                                                                                                       gcGAGATTCGAGTCGAGTACTTCTTCCAGGCCATTCTGGCTGCGCGACT‑GGCTGGGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  2:1800500/288‑1 (MQ=255)
                                                                                                         gagaTTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCTGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGa                                                                                                                                                                         <  1:1111174/289‑1 (MQ=255)
                                                                                                          ggaTTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTTAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGa                                                                                                                                                                         <  1:1698295/287‑1 (MQ=255)
                                                                                                          cgttttgagcatggCACATCTTCCAGCTACTTCTGGCGGCGCGGCT‑GGCTCAGGGCGATTTCCGTTTGCGTTATGGGAGTCGTAATTGGTGTGCGAAATTCCTGAGGGCTGTGCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCGCAATAGTCCCGATCATCTGGTTGACCGACAGTACCAGCTGTTCCAGCTCAATGGGCACTGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGCGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGa                                                                                                                                                                         <  2:500077/275‑1 (MQ=255)
                                                                                                                gagtagagCACTTCTTCCAGCTCCTTCTGGCGGCGCGACT‑GGCTTAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt                                                                                                                                                                  <  2:1002865/289‑1 (MQ=255)
                                                                                                                  gtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt                                                                                                                                                                  <  2:424188/287‑1 (MQ=255)
                                                                                                                  ggtgagCAGATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGGAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt                                                                                                                                                                  <  2:1298168/284‑1 (MQ=255)
                                                                                                                   tagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGt                                                                                                                                                                <  1:188088/288‑1 (MQ=255)
                                                                                                                    agagCACATCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTa                                                                                                                                                               >  1:677741/1‑288 (MQ=255)
                                                                                                                         acaTCGTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGcc                                                                                                                                                          <  1:315703/288‑1 (MQ=255)
                                                                                                                          caTCTTCACGCTCCTTCTGGCTG‑GGCGCTGGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCaa                                                                                                                                                        <  2:160861/289‑1 (MQ=255)
                                                                                                                           aTCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGGTGAAAGACAGTACCAGCTGTTCCAGCTCCATGGGCACGGGCGGCGGGGC‑GAGGGGGACGTGGCGATCTTTCGAGGGAATTGTCTGGAATTTGCGGGTGGCGCACGGGGACGGCGCGTGCGCTTTTTGTatacccaac                                                                                                                                                       >  2:1433871/1‑281 (MQ=255)
                                                                                                                            tCTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAAATTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACa                                                                                                                                                      <  1:1207358/289‑1 (MQ=255)
                                                                                                                             cTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGAt                                                                                                                                                                                   <  1:40064/259‑1 (MQ=255)
                                                                                                                             cTTCCAGCTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAg                                                                                                                                                     <  2:368057/289‑1 (MQ=255)
                                                                                                                             cTTCCAGCGCCTTCTGGCTGCGCGATT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACTGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAg                                                                                                                                                     <  2:1109943/289‑1 (MQ=255)
                                                                                                                                    cTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTAcc                                                                                                                                                                                                                                                                                   >  1:163490/1‑157 (MQ=255)
                                                                                                                                    cTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTAcc                                                                                                                                                                                                                                                                                   <  2:163490/157‑1 (MQ=255)
                                                                                                                                    cTCCTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGGTCGGCGCGTGACCCTTATGTACCGCCAAATGTACGATa                                                                                                                                              >  1:667237/1‑289 (MQ=255)
                                                                                                                                       cTTCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGTC‑GAGGGGAACGGCGAGAGCTTTCGGGGGAATATTCTGGGTTTGTCGGGTGAAGCCGCGGATCGGCGTGGGGCCTTTTTGTTCCGCCAACAGTACGaactgt                                                                                                                                           >  2:412185/1‑284 (MQ=255)
                                                                                                                                         tCTGGCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGGACCAGCTGTTCCAGCTCAATAGGCACGGTCTGCTGGTC‑GAGGCGAACGTCGAGATCTTTCGGGGTAATATTCTTGGTTTGACGGCGGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGaa                                                                                                                                         >  1:1427476/1‑288 (MQ=255)
                                                                                                                                            ggCTGCGCGACT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGAt                                                                                                                                      <  1:1433871/289‑1 (MQ=255)
                                                                                                                                                 cgcgact‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGCTTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATGCTCCATACGGCCGATCATATGGTTGAACGACAGTCCCCGCCGTTCCAGCCCCCTCGGCGCGGGCGGCGGGGC‑GCGGCGGACGTCGCGACTTCTATGGGTCATAGTCTCGATTTGACGGCTGCCGCTTCGCCGCGGCGCGTCTCCCTTATTGAACGTCCACAGGACGATCAAGACGACGAGGa                                                                                                                                 >  2:286621/6‑289 (MQ=255)
                                                                                                                                                 cgcgact‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATAATCTGGATTTGAAGGCTGACGCTGCGGATCGGCGCGGTACCTTTATGTACCGCCAACAGTACGATAAAGAAGATCAGGa                                                                                                                                 >  1:478742/6‑289 (MQ=255)
                                                                                                                                                 cgcgact‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGGTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGGGGGTC‑GAGGCGAACGTCGAGATCTTTTGAGGTAAACTTCTGGGTTTGACGGCTGACGCCGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGGATGATAAAGAcagtccggg                                                                                                                                 >  2:823210/6‑281 (MQ=255)
                                                                                                                                                  ggtgtggggtggggggCGTTTTGGGTTGGGGTGAGGAGATGCGTAATTGGTGGGCGAATTTCGTGAGCGATATCCGCGGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGACCGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGGGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAgg                                                                                                                                  <  2:892725/275‑1 (MQ=255)
                                                                                                                                                  gcgact‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGa                                                                                                                                 <  1:823210/284‑1 (MQ=255)
                                                                                                                                                    gact‑GGCTGAGGGCGATTTCGGTTTGCTTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATg                                                                                                                               <  1:1413883/286‑1 (MQ=255)
                                                                                                                                                      ct‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGCTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGa                                                                                                                                                                         <  1:36316/244‑1 (MQ=255)
                                                                                                                                                      ct‑GGCGGAGGGCGATTTAGGTTTGCGTTATGAGATTCGTAATTGGGGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCt                                                                                                                             <  2:1727789/288‑1 (MQ=255)
                                                                                                                                                       cggggtggggggGATTGCGGTTTGCGTTATGGGATTCGTAATTGGTGGGCGAATTTCGTGAGCGGTATCCGCTGGGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCt                                                                                                                             <  2:1281692/280‑1 (MQ=255)
                                                                                                                                                                  tgATTTCGGTTTGGGTTTTGAGGTTCGTTATTGGTGTGGGAATTTCGTGGGCGATTTCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatg                                                                                                                  <  2:1288227/287‑6 (MQ=255)
                                                                                                                                                                  cGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatg                                                                                                                  <  1:856901/288‑6 (MQ=255)
                                                                                                                                                                   gATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatgcg                                                                                                                <  1:1785425/289‑8 (MQ=255)
                                                                                                                                                                    aTTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGGGCGTTACCTTTATGTACCGCCAACAGTACGATAAAGa                                                                                                                                          >  1:1281319/1‑262 (MQ=255)
                                                                                                                                                                    aTTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatgcg                                                                                                                <  1:570621/288‑8 (MQ=255)
                                                                                                                                                                     tttCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGcgcg                                                                                                                                                                            <  1:1572498/227‑1 (MQ=255)
                                                                                                                                                                     tttCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           <  1:45631/228‑1 (MQ=255)
                                                                                                                                                                     tttCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgatgcgg                                                                                                               <  2:1921561/288‑9 (MQ=255)
                                                                                                                                                                     tttCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGt                                                                                                              <  2:719278/289‑1 (MQ=255)
                                                                                                                                                                        cGGTTTGCGTTATGAGATTGGTAATTGGTGTTGCAATTTCGGGGGCGTTATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGTTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCat                                                                                                           <  2:939627/289‑1 (MQ=255)
                                                                                                                                                                        cGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCCATACGCCCGATCATATGGTTGAACGACAGTACCAGCTGTTCCCGCTCCATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGGGTGACCTTTTTGTAACGCCAACAGTACGAAAAAGACGATCCGGAGGGTGATTagccactcggtcat                                                                                                           >  2:1199776/1‑276 (MQ=255)
                                                                                                                                                                          gTTTGCGTTATGAGATTCGTAATTTGTGTGCGAATTTCGTGAGCGATATCCTCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACCGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCataa                                                                                                         <  1:1196192/289‑1 (MQ=255)
                                                                                                                                                                                           cGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCaaa                                                                                        >  1:1480297/1‑289 (MQ=255)
                                                                                                                                                                                               aTTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCAt                                                                                    <  1:1290933/289‑1 (MQ=255)
                                                                                                                                                                                               aTTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCGGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCAt                                                                                    <  1:866127/289‑1 (MQ=255)
                                                                                                                                                                                                     gtgCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgat                                                                                                                   >  1:244123/1‑248 (MQ=255)
                                                                                                                                                                                                     gtgCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTAAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTAccgat                                                                                                                   <  2:244123/252‑5 (MQ=255)
                                                                                                                                                                                                                    gCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCTATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGaaaa                                                                <  1:322330/288‑1 (MQ=255)
                                                                                                                                                                                                                               ggagAAAGTGGACTGGCGGGGAAAGACATCCTCAATACGCTCGATCATATTGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGGCGGCTGACGCTGCGGATCGGCGCGATACCTTTATGTACCGCCAACAGTACGATAAAGCCGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCTAtcgaaagc                                                    <  1:524770/286‑8 (MQ=255)
                                                                                                                                                                                                                                gagAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTGGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagcg                                                   <  2:549816/287‑9 (MQ=255)
                                                                                                                                                                                                                                 agAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGt                                                                                                                                                                           >  1:1806032/2‑168 (MQ=255)
                                                                                                                                                                                                                                          aCTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTaga                                          <  1:160019/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                  tACGCTCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTcca                  >  1:1814627/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACg            >  1:1703967/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACg            >  1:1877613/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCAACAACg            >  1:1784972/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tCGATCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGCCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGGTGTAGAGGCTATAAATAGGTTTGCCATCCACCCACg            >  2:766928/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          aTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTg                         >  1:1740328/1‑273 (MQ=255)
                                                                                                                                                                                                                                                                          aTCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTg                         <  2:1740328/273‑1 (MQ=255)
                                                                                                                                                                                                                                                                           tCATATGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGcc        <  1:751648/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                               atGGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagcg                                                   >  1:1799856/1‑234 (MQ=255)
                                                                                                                                                                                                                                                                                 ggTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCgg  <  1:143568/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
ATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCT‑GGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATATGGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTC‑GAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGGATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTACGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTCATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCGG  >  CP042583/473203‑473763

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A