Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A6 F210 I1 R1
|
4928 |
340.1 |
5480506 |
96.9% |
5310610 |
252.0 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
473,482 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 473,482 | 0 | G | C | 97.2%
| 497.0
/ ‑5.7
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (80/130); minor base A (6/0); total (87/130) |
| Fisher's exact test for biased strand distribution p-value = 3.57e-03 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 473,483 | 0 | C | G | 99.5%
| 508.5
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/1); new base G (86/129); total (87/130) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 473,484 | 0 | T | A | 98.6%
| 502.2
/ NA
| 217 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (83/130); minor base G (3/0); total (87/130) |
| Fisher's exact test for biased strand distribution p-value = 6.18e-02 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 218 total aligned reads displayed.
ATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCG > CP042583/473203‑473762
|||
aTCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAAGAATGCTCCATACTCTCGGACATATCGGTGGAAgaacgtaac > 2:1747721/1‑281 (MQ=255)
ccGCCAGTGTGAGCATTTTCTTTTCGGGGATTAGGTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAg < 2:2685832/289‑1 (MQ=255)
ccGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACGTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAg < 1:2659597/289‑1 (MQ=255)
cgacatgtgtggCATTTTCGTTTCGGGGTTGAGTTTGTTGGTATCGGGATAGGCGAGAAAAAGACTATCGTTGCGCATTTCTGCCAGTCTCTGCAGCTCTTCGAGATTAGAGTAGAGCACATAGCACAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGTGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAg < 2:2300169/277‑1 (MQ=255)
cGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGc < 1:1454034/289‑1 (MQ=255)
ttGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGtt < 1:1603711/286‑1 (MQ=255)
gtgCATTTTTCTGTCGGGGAATAGCGCGTTTTGTTCGGCGTGCGCGAGACACAGCATATCGCTGACCATTTTCGCCATTCGCGTAAGCTCTTCGAGATTCGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGc < 2:2239639/287‑1 (MQ=255)
aGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCAATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAAACATCCTCAATAAGCTCGAATATAT‑GGTTTAATGACAATACCAACTTTTCCAgg > 1:319216/1‑287 (MQ=255)
ttcttttcGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATgg > 1:346713/1‑289 (MQ=255)
gttgttATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCGCAATACGCTCGATCATAT‑GGTTGAAAGACATGACAAGCTGTTCCAGCCCAATTGGCACGGGTTGCGGGTCGAgg > 1:845770/1‑289 (MQ=255)
tATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGtt < 1:1027322/252‑1 (MQ=255)
aTCGGCCTGAGCGAGATACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa < 2:2439242/266‑1 (MQ=255)
aTCGGCCTGAGCGAGATACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCa > 1:2439242/1‑266 (MQ=255)
ccTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGGACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGGGGCGaaaggccga > 1:2173005/1‑282 (MQ=255)
aGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAAAGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCt > 1:676693/1‑289 (MQ=255)
gagaAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 1:203121/288‑1 (MQ=255)
gagaAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 1:1424876/288‑1 (MQ=255)
gagaAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 2:1731053/288‑1 (MQ=255)
cggaAACAGGTTTTCGCTGACCATTTTCGCCATTCGCGTCAGATCTTCGAGATGAGAGAAGAGCAAATCTTCCGGCTCTTTATGGCTGCGCGACTGGCTGAGGGCTATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCttt < 2:557765/286‑1 (MQ=255)
gaaaacgCATATTGCTTCCCATTTTCGCCATTCGCGTTGTCCCTTCGGGATTAGGGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCtttcg < 2:845770/282‑3 (MQ=255)
gaAACAGCTTGTCGCGGACCATTTTGGCCGTTCGCGTCAGCTCTTCGGGATTAGAGTAAAGCACATCTTCCGGCTCCTTCTGGCTGCGCGACGGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCtttcg < 2:2060397/288‑3 (MQ=255)
aCAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCtttcgaggt < 1:1850946/289‑7 (MQ=255)
tatCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATAtt < 2:191603/289‑1 (MQ=255)
cGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAg > 2:2264290/1‑220 (MQ=255)
cGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAg < 1:2264290/220‑1 (MQ=255)
cGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTg < 2:1296577/289‑1 (MQ=255)
ttCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGc < 2:1573907/289‑1 (MQ=255)
gCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGa < 1:215456/289‑1 (MQ=255)
ccATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAg < 1:1300807/214‑1 (MQ=255)
aTTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGGCGAGGCGGACGTCGAGATCTTTCTGGGTAATATTTTGGTATTTGA‑GGCTGACg > 1:98982/1‑288 (MQ=255)
aTTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGAAATCCTCAATACGCTCCATCATAT‑GGTTGAACAGAAGGACCAGCTGTTCCAACCCAATGGGCACGGTCTGCGGGTCGAGGGGAAGCTGCGGGTCTTTCGAGGTAATATTCTGG‑ATTTgcagggtcgc > 2:1312177/1‑278 (MQ=255)
tCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGa < 2:2604113/284‑1 (MQ=255)
cAGCTCTTCGATGTTAGAGTAGCGCAAACGTGCCAGCTCCTTGTGGCTGCGCGGCTTGGTGAGGGCGATGTCGGTTTGCGTTATGAGATTCGGAAGTGGTGTGCGAAGTTCGTGAGCGATATCCGCTGAGAAATGGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGAt < 2:501014/288‑1 (MQ=255)
cAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGAt < 1:2254173/288‑1 (MQ=255)
cAGCTCTGCGAGTTTAGAGTAGGGCACATCTTCCAGCTCCTTCTGGCTGCGCGACGGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGAt < 2:890364/288‑1 (MQ=255)
tgttctTAGAGTTTTGAGTAGAGCATATCTTCCAGTTCGTTCTGGCGGCGCGAGTGGCTGAGGGAGATTTCGGTTTGAGTGATGAGATTCGTAATTGGTGGGCGAATTTCGTGAGCGCTATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCTTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACAAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATc < 2:185129/285‑1 (MQ=255)
ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCat > 2:1635339/1‑197 (MQ=255)
ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAg < 1:1635339/198‑1 (MQ=255)
ttCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGcgcg < 1:2266603/289‑1 (MQ=255)
tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt < 1:1764701/289‑1 (MQ=255)
tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCACTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt < 2:346713/289‑1 (MQ=255)
tCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATGTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt < 1:1142712/289‑1 (MQ=255)
ttAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCt < 1:2700253/288‑1 (MQ=255)
gagtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt > 1:403719/1‑289 (MQ=255)
agtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt < 1:235646/288‑1 (MQ=255)
gtagagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt < 1:1430106/287‑1 (MQ=255)
gagCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGAAATCCTCAATACGCCCGGTCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGAACTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTTCGGGTCGGCGCGGGACCTTTATGTAc > 2:2699915/1‑288 (MQ=255)
agCACATCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAAACATCCTCAATACGCTCGCTCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCACTTGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGGACTTTTGAGGTAATATTCTGG‑GTTTGACGGGTGACGCTGCGGATTGGCGCGTGACCGTTATGTAcc > 2:628808/1‑288 (MQ=255)
acaTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGcc < 1:1886904/288‑1 (MQ=255)
caTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTTACGGCTGAACGTGGGGAACCGCGGGTGACCTTTaaggtgtctctt > 2:1267710/1‑278 (MQ=255)
aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGGCTGCGGGTCGGGGCGAACGTCGGGACCTTTCGAGGTAATATTCTGG‑GTTTGACGGCTGACGCTGCGGGTCGGCGCGGGGCCTTTATggtacgccca > 2:235646/1‑279 (MQ=255)
aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCCGTTCCAGCTCAATGGGCACGGTCCGCGGGGCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCGGCGGTTTGTGGCGTGACCTTTATGTTCCGCCAAc > 1:153021/1‑289 (MQ=255)
aTCTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCCCGATCATAT‑GGTTGAACGACAGTACCCGCTGTTCCAGCCCAATGGGCACCGTCTGCGGGTCGACGGGAACGTCGAGAACTTTCGAGGTAACATTTTGG‑ATTTGACGGCTTGCCCTTGGGATCCGGGCGTGACCTTTTTGTACCGccca > 2:1119490/1‑286 (MQ=255)
cTTCCAGCTCCTTCTGGCTGCGCGCCTGGCTGAGGGCGATTTCGGTTTGCGTTATGGGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAg < 1:740719/289‑1 (MQ=255)
cTTCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCaa < 1:2080266/286‑1 (MQ=255)
tCCAGCTCCTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt < 1:1198511/265‑1 (MQ=255)
cTTCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGGTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGGAATATTTTGG‑GTTTGGCGGCTGAGGCTGCGGGTGGGCGCGGGAGCTTTATGTACCCCCAACAGTA‑CGATa > 2:2080266/1‑286 (MQ=255)
tCTGGCTGCGCGACTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGAc < 2:663674/289‑1 (MQ=255)
gcgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAgg < 1:1237442/283‑1 (MQ=255)
gcgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAgg < 1:591820/283‑1 (MQ=255)
cgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAgg < 1:1782871/283‑1 (MQ=255)
cgcgactGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATCCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAgg < 1:1004969/283‑1 (MQ=255)
cgggCTGAGGGGGATTTCGGTTGGAGGTATGATATTAGTAATGTGTGTGCGTATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTTGATGATAT‑GGGTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTGGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCAAACAGTA‑CGATAAAGACGATCAGGATGCt < 2:149140/286‑1 (MQ=255)
tGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGGCTGCGGGGCGGGGCGAAAGTCGAGATCTTTTGAGGGAATATTTTGG‑ATTTTGAGGCGGACGCTGCGGAGAGGTGCGGGTACCTTATGTATCGCCAACAGGG‑CGCTAAAGAAGAGAAGGAGTCTGa > 2:1034091/1‑289 (MQ=255)
cTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTa < 1:143698/250‑1 (MQ=255)
gggCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGGAATATTCTGG‑ATTTGACGGCTGACGCCGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGAACAGGATGCTGCTTAccg > 1:252800/1‑286 (MQ=255)
gCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTAccgat < 1:1333206/288‑5 (MQ=255)
tttCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCCCAATGGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGGGGGTCGGCGCGGGACCTTTTTGTTACGCCcacaa > 2:143698/1‑249 (MQ=255)
tttGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCataa < 1:1740082/288‑1 (MQ=255)
tATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGttt < 1:463319/288‑1 (MQ=255)
ttCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTAt < 2:319514/217‑1 (MQ=255)
ttCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATtc‑atca > 1:2402057/1‑289 (MQ=255)
tAATTGGTGTGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAAt < 2:1173570/288‑1 (MQ=255)
gtgtGCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt > 1:943009/1‑198 (MQ=255)
tgCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCg > 1:647313/1‑189 (MQ=255)
gCGAATTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCaa > 2:2202780/1‑213 (MQ=255)
aaTTTCGTGAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATg < 1:498348/288‑1 (MQ=255)
aTTTCGTGGGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGa < 2:1388591/288‑1 (MQ=255)
gAGCGATATCCGCTGAGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGGCGAGGCGAACGTCGAGATCTTTCGCGGGAATATTTTGG‑GTTTGACGGCCGACGGCGGGGGTCGGCGCGGTACCTTTTTGTTCCGCCCACAGGATGGATAACAAGGAACGGGTTCGTGATTACCTATGCGGCCA‑AATAAATTTATTCAATCAAA‑CAATTTTGTTAAGAAAATGaaa > 2:1475279/1‑289 (MQ=255)
gagAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaagcg < 1:654353/287‑9 (MQ=255)
agAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAg > 2:2473463/2‑190 (MQ=255)
gAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATg > 1:1561578/1‑264 (MQ=255)
gAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGaacgaaagcgcg > 1:790360/1‑278 (MQ=255)
ccTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGt < 2:1985082/141‑1 (MQ=255)
ccTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCt > 1:2639711/1‑187 (MQ=255)
ccTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGt > 1:2130911/1‑202 (MQ=255)
ccTCAATACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGt < 2:2130911/202‑1 (MQ=255)
aTACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTaga < 1:1277963/265‑1 (MQ=255)
tACGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGAtcgaaa > 1:1971345/1‑247 (MQ=255)
cGCTCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTccacca < 1:2228218/289‑1 (MQ=255)
tCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTa > 2:453556/1‑204 (MQ=255)
tCGATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACg > 2:911505/1‑289 (MQ=255)
gATCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTACACCAACgg > 1:2579146/1‑288 (MQ=255)
aTCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGc > 1:1489413/1‑274 (MQ=255)
aTCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACggg > 2:2714108/1‑288 (MQ=255)
aTCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACggg > 1:399153/1‑288 (MQ=255)
tCATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGc < 1:2714108/288‑1 (MQ=255)
cATAT‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCa > 2:154902/1‑289 (MQ=255)
tat‑GGTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCaa > 2:2576601/1‑288 (MQ=255)
ggTTGAACGACAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTCGAGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACCGATGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATCGAAAGCGCGATGTATAGCGTATAAATAGGTTTGCCGTCCACCAACGGCCCAACCg > 2:79284/1‑288 (MQ=255)
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ATCCGCCAGGTTGAGCATTTTCTTTTCGGGGATTAGCTGGTTGTTATCGGCCTGAGCGAGAAACAGCATATCGCTGACCATTTTCGCCATTCGCGTCAGCTCTTCGAGATTAGAGTAGAGCACATCTTCCAGCTCCTTCTGGCTGCGGCTCTGGCTGAGGGCGATTTCGGTTTGCGTTATGAGATTCGTAATTGGTGTGCGAATTTCGTGAGCGATATCCGCACTGAAATTGGACTGGCGGGTAAAGACATCCTCAATACGCTCGATCATAT‑GGTTGAAGCTCAGTACCAGCTGTTCCAGCTCAATGGGCACGGTCTGCGGGTCGAGGCGAACGTCGAGATCTTTGCTGGTAATATTCTGG‑ATTTGACGGCTGACGCTGCGGATCGGCGCGTGACCTTTATGTACCGCCAACAGTA‑CGATAAAGACGATCAGGATGCTGATTACGCTTGCGGTCATAATAAGTTTATTC‑ATCAAATCATTTATGTAATGAAGATGAAAATCGATGCTAAGCGCGATGTAGAGCGTATAAATCGGTTTGCCGTCCACCAACGGGCCAACCG > CP042583/473203‑473762
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
