Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
578,209 |
3 bp→TCG |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 578,209 | 0 | A | T | 99.6%
| 531.0
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base A (1/0); new base T (93/133); total (95/134) |
| Fisher's exact test for biased strand distribution p-value = 4.14e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 578,210 | 0 | G | C | 98.7%
| 530.5
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (1/2); new base C (93/132); total (95/134) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 578,211 | 0 | C | G | 99.6%
| 531.2
/ NA
| 229 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (94/134); total (95/134) |
| Fisher's exact test for biased strand distribution p-value = 4.15e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 230 total aligned reads displayed.
AGCATTCGCCAGCAAAGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTAAGTCCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCAGCATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACG > CP042583/577929‑578489
|||
gCCAGCAAAGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCgg < 1:1588472/289‑1 (MQ=255)
aaaGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGtt < 1:1335254/288‑1 (MQ=255)
aaGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGAAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTg < 1:146566/289‑1 (MQ=255)
tgggtgACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTgcagca < 1:1055924/288‑1 (MQ=255)
cGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATcgac > 1:1195602/1‑289 (MQ=255)
tgtgGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGAt > 2:969205/1‑289 (MQ=255)
tgGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGAtt > 1:1838932/1‑288 (MQ=255)
tgGCGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGAtt > 2:4873/1‑288 (MQ=255)
cGGTGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAg > 1:657611/1‑289 (MQ=255)
cGGTGAAACAGACAGATAAAAACGTCCTATCACCATGCGCAGGGACATAC‑GTGAAAACCTTCAACA‑CAACCACCGCGTTCGGCCTGGAAACCGCACAAGGCGCGGGGATAGTGGGCCATATGGGGATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAGCCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCa < 2:1112811/288‑1 (MQ=255)
tGAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGTAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCTGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCCCTCGATGTTTTGCCCGGTACTTTGGCGCAATATTGCCGATTCCACTg > 2:1700636/1‑288 (MQ=255)
gAAACCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGc < 1:310915/289‑1 (MQ=255)
aaaCCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGCTGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCt > 1:129686/1‑289 (MQ=255)
aaaCCGACAGATAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGT‑‑TGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTg > 1:961816/1‑289 (MQ=255)
accgcaaGATACAATGCTCGTATCCCCAGCCGCATGGACAATC‑GGGAAAATCTTCACCACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGAGCGGAGATCGTCGTCCATATGGGTATCGACAACGGAGCGCTGGAAGGTAAAGGCTTTAAACGTATGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTg < 2:1090395/283‑1 (MQ=255)
aCCGAAAGATAAAATCGTCGGACCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTg < 2:357857/289‑1 (MQ=255)
actaCAGATAAAATCGTCCTATCACCCGCCGCAGGGACAATC‑GTGGAAATCGTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGa < 2:20420/286‑1 (MQ=255)
cGACAGATAAAGTCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGAt < 2:1731819/289‑1 (MQ=255)
tAAAATCGTCGTATCACCCGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTa < 2:284795/287‑1 (MQ=255)
tAAAATCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGCAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTa < 1:886034/287‑1 (MQ=255)
aaTCGTCGTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGGAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCt < 2:106524/289‑1 (MQ=255)
tcgtcgTATCACCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 1:703355/289‑1 (MQ=255)
cgtatcccccgCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAggg < 1:550909/278‑1 (MQ=255)
cgtatcaccAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCC‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATAAGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAggg < 1:1447089/281‑1 (MQ=255)
cgtatcaccAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAggg < 2:398298/281‑1 (MQ=255)
tatcaccAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCa < 2:1400203/284‑1 (MQ=255)
accAGCCCGAGGGAAAATCTGTG‑AAATCTGCAACACCACCCC‑CGCGTTCTGGCTGGCACCCGAAGAAGGGGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAACGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATAtt < 2:259514/288‑1 (MQ=255)
gCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGATAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATtgtg > 1:527199/1‑288 (MQ=255)
cGCCGGGACAATC‑GGTAAAATCTTCAACACCAACCA‑CGCGTTCTGCCGGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCGGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGc < 1:1705608/288‑1 (MQ=255)
cGCAGGGACAATC‑GTGAAAAACTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATtgtg < 1:665332/286‑1 (MQ=255)
cGCAAGGACAATC‑GTGAAAATCTTCAACCCCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATtgtg < 1:1408502/286‑1 (MQ=255)
aTC‑GTGAAAATCTTCACCACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAacac < 1:1468099/289‑1 (MQ=255)
c‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCg < 2:1686098/289‑1 (MQ=255)
gAAAATCTTCAACACCAACCA‑CCCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGCCACCGTAGCGCTGGAAGGAACACGCTTTAAACGTCTGGTGGAAGAGAGTGCGCAGGTACGCGCAGGGCAACGGATTCTGGAAATGGATCTCGATTACACGAACGCTAAGGCCCGATCGAAGATAAACCCGGAGCTTTGGATGAACTACGACTCTTTCATCGGCATCATCATCAAAGCGCGGCGCCATCTCGAGGCGGGtgactcacccat > 2:953675/1‑277 (MQ=255)
gAAAATCGTCAACCCCAACCA‑CGCGTTCTGCCTGGAAACCGAAAACGGCGCGGAGATCGGCGTCCATAGGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCt < 2:1569998/288‑1 (MQ=255)
aTCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATg < 1:327014/289‑1 (MQ=255)
ccaacca‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCaaaaa < 1:1384109/289‑1 (MQ=255)
acca‑CGCGTTCTGCCTGGAAACCGAAAAAGGGGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCt < 2:724641/239‑1 (MQ=255)
acca‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTTCAAAAACGCCGTTTTAAATCaaaaaaac > 2:500846/1‑286 (MQ=255)
acca‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGAGCCATATTGTGGCGGGTCCAAAACCACGGTACGAAATCTAAAAGTa > 1:1026207/1‑289 (MQ=255)
a‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATc < 2:1511140/289‑1 (MQ=255)
gcgTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTg > 2:1427267/1‑222 (MQ=255)
gcgTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATTAAATCAAAAAGTAATCt > 1:257115/1‑288 (MQ=255)
gcgTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCt > 1:819349/1‑288 (MQ=255)
gcgTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAAAACCGCCGTATGAAATTAAAAAATAATCt > 2:1313177/1‑288 (MQ=255)
ttCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCCCAGGGCCATATTGTGGCGGGTATAACACCGCTGGATAATAACACAAAGAAAttcgttt > 2:565653/1‑283 (MQ=255)
tCTGGCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCttt < 1:669157/289‑1 (MQ=255)
tGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGGAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTAt < 2:1217343/289‑1 (MQ=255)
cTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGcc < 2:657611/289‑1 (MQ=255)
aaGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑tt < 1:227911/289‑1 (MQ=255)
gggagcttggcgtcCATGTGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTACGCGAAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCg < 2:1414187/278‑1 (MQ=255)
ataggtgtacaattGGGGAGCGACCACGTAGCGGTGGAAAGGAAAGGATTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGGAGGGCAACGTATTATGGAAATGGATCTGGATTACCTGAACGATAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCa < 2:312064/275‑1 (MQ=255)
aTCGTCGTCCATATGGGTATCGAAACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCa < 2:826400/288‑1 (MQ=255)
cgtcgtACATATGGGTTTCGAAACCGTAGGGCTGGAAGGTGAAGGCGTTAAACGTCTGGTGGAGGAGGGTGCGCAGGTAAGCGCAGGGTAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGGCCGCTCGATGATTAGCCCGGTGGTTTGCAGGAATATGGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTAGGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATcc < 2:1458715/289‑1 (MQ=255)
tcCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAAAACCGCTGTATGAAATCAAAAAGTAATCTGGTTTATGCCTGGTGCGACGC‑GTGAGCGTCGCAGCcaaaca > 1:445840/1‑286 (MQ=255)
atGGGTAGCGACACCGTAGCGGTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCGGGGAAGCGCAGGGTAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACa < 2:1940517/289‑1 (MQ=255)
gggTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAg < 1:1142620/289‑1 (MQ=255)
tATCGACACCGTAGCGATGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCg < 1:599719/288‑1 (MQ=255)
cacCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGgag < 2:961037/288‑1 (MQ=255)
cGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCaaa < 1:1832396/200‑1 (MQ=255)
cGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCaaa > 2:1832396/1‑200 (MQ=255)
tAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGTTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTTTGAAAATAAAAAGGAATCTGCTTTATGCCTGATGCGACGC‑TTGAGGGTCGCATCCAACAAATACaaacagggggagtct > 2:247329/1‑274 (MQ=255)
tttAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCa < 2:1623120/155‑1 (MQ=255)
tttAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCa > 1:1623120/1‑155 (MQ=255)
tAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCt > 1:575586/1‑151 (MQ=255)
tAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCt < 2:575586/151‑1 (MQ=255)
aaCGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCatcaat < 1:488570/289‑1 (MQ=255)
cGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCatcaatca < 1:938947/289‑1 (MQ=255)
cGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCatcaatca < 1:331287/289‑1 (MQ=255)
gTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAatcat < 1:753520/289‑1 (MQ=255)
gTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAatcat < 1:267824/289‑1 (MQ=255)
gTCTGGTGGAAGAGGGTGCGCAGCTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTTGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAatcat < 2:464962/289‑1 (MQ=255)
tggAAGAGGGGGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGGTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCa < 2:1789351/288‑1 (MQ=255)
gTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCAACCAAAAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTTTTCAAACATCCCCCAAAACCtttt > 1:993528/1‑287 (MQ=255)
cgcAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACCC‑TTTAGCGTCGCATTCAACAATGACAAGCGGTGGAGGTCTTTT‑CTTCCGCTTTT‑TTTTTCATCATACATACCCATAATCCTTGCTac > 2:81358/1‑288 (MQ=255)
gTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGAATTCAGTGGCTTTCTCATTAAAGCTCAGGGCCATATTGTGGCGGGTTAAACAACGCCTTTTGGCATTAAAAAGTAAACTGCTTTTGTCCTTGTGAGACTC‑CTGCGTCTCGCGTCCCACCACGAAAAGCTGTGG‑GACTTTGTCCTCCCGCTTTTGTTTTTCTTCACTC‑TCCCCATAATCCGTTTTAG‑Attct > 2:90499/1‑287 (MQ=255)
cgcAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGGCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCCTATGCGACGC‑CTGATCGTCGCAACCAACAATGACCAGCGGGGGAGAGATTCT‑CTGCGGCTTTT‑TTTTTTCTCCATCATCCCCATAATACCTGTTTG‑GATATCAAtt > 2:1524043/1‑289 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCtt < 2:1817678/100‑1 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCtt > 1:1817678/1‑100 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGGTGAGATCTTCC‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTTTTTG‑ATTATCAATTTTtaa > 1:1934712/1‑289 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATATGCTTTATTCCTGATGCGAAGC‑TTGAGCGTCGCATCCAACAATGACAAACGGGGGGAAACTTCC‑CTGCCGCTTTT‑CTTTTCCTCAATATTCCCCATAAACCTTGTTAT‑ATTATCAATTTTaaa > 2:119290/1‑289 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATATGCTTTATGCCTGATGCGACGC‑TTGAGCGTCTCATCCAACAATGACAAGCGGTGGAGAACTTCC‑CTGCCGCTTTT‑TTTTTCATTAATCATCCCCCTAATCCTTTTTTG‑ATTTTCAATTTTtaa > 1:73575/1‑289 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCCGTCTGAAATCAAAAAATAATCTGCTTTTTGCCTGATTCGACCCTTTGACCGT‑GCACCCAACAAACACAAACGGTGGAGATCCTCT‑CCGCCCCCTTT‑TTTTTCTTCTATCATACCCATCATCCTTGTTTC‑TTTATCAATTTTtaa > 2:1355987/1‑289 (MQ=255)
ggCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGGCAAACACCGCCGTTTGAAATCAAAAAGGAAACTGCTTTATTCCTGGTGGCACGC‑TTGAGCGTCGCCTTCAAAAATGACCAGCGGTGGGGGTCTTCT‑CTGCCGCCTTT‑TTTTTTTTCTAACACCTCCATACACCCTTTTAT‑ATTTTCTATTTTaaa > 2:1638856/1‑289 (MQ=255)
aTTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCAGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAAc < 2:683467/289‑1 (MQ=255)
tGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAAc < 1:1872996/285‑1 (MQ=255)
ggAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTg < 1:1372189/289‑1 (MQ=255)
ggAAATGGATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTg < 1:1582069/289‑1 (MQ=255)
ggATCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGTTTTTTGCCTGATGCGACGC‑CTGAGGGGCGCATCCAACCATGACAAGCCGGGGCGAGCTTCT‑CCTCCGCTTTT‑TTTTTTCTTAATCCACCCCCTCATTCTTTTTTGTATTTTC‑ATTTTAAAAAACCAAAAGtttttagg > 2:1372189/1‑282 (MQ=255)
tCTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATAAAAAAATAATCTGCTTTATGCCTGATTCGCCGC‑TTTGGCGTCGCATCCAACAATGACAAGCGGTGGAGAAATTCT‑CCGCCGCTTTT‑TTTTTTCTTAAATATCCCCAATATCCTCTTTAG‑ATTTATAAATTTAAACAACCAACAATTGTccaccctt > 2:1872996/1‑282 (MQ=255)
cTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc < 1:612984/289‑1 (MQ=255)
cTGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTc < 1:1313177/289‑1 (MQ=255)
tGGATTACCTGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTcc < 1:1743996/289‑1 (MQ=255)
tGAACGCTAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATaa < 2:1475710/289‑1 (MQ=255)
tAACGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 1:308563/289‑1 (MQ=255)
gaaCGCCCGCGCGATGTTTAGCCCGGTGGTTGGCAGCAATAGCGACGATTTCAGTGGCTTGTTCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGTCGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 2:527199/288‑1 (MQ=255)
aaCGCCCGCTGGATGATTAGCGTGGGGGTTTGCAGAAATGTGGCAGATTGCAGTGGCTGGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATa < 2:1161546/288‑1 (MQ=255)
aaCGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGGTCATTAAAGCTCAGGGCGATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCCTCAATCATCCCCATAATCCTCGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATAc < 1:1763441/289‑1 (MQ=255)
aaCGCCCGCTCGATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTTCCGCTTTT‑TTTTTCATTAATTCTCCCCCTAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTTTCAGCCTGTCCCGCTTATAAGATCATa > 1:418079/1‑288 (MQ=255)
aCGCCCGCTCGATGATTAGCCCGGTTGTTTGCAGCCATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACg < 1:1362946/289‑1 (MQ=255)
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AGCATTCGCCAGCAAAGCGGTGGGTGACGGTGTGGCGGTGAAACCGACAGATAAAATCGTCGTAAGTCCAGCCGCAGGGACAATC‑GTGAAAATCTTCAACACCAACCA‑CGCGTTCTGCCTGGAAACCGAAAAAGGCGCGGAGATCGTCGTCCATATGGGTATCGACACCGTAGCGCTGGAAGGTAAAGGCTTTAAACGTCTGGTGGAAGAGGGTGCGCAGGTAAGCGCAGGGCAACCGATTCTGGAAATGGATCTGGATTACCTGAACGCTAACGCCCGCAGCATGATTAGCCCGGTGGTTTGCAGCAATATCGACGATTTCAGTGGCTTGATCATTAAAGCTCAGGGCCATATTGTGGCGGGTCAAACACCGCTGTATGAAATCAAAAAGTAATCTGCTTTATGCCTGATGCGACGC‑TTGAGCGTCGCATCCAACAATGACAAGCGGTGGAGATCTTCT‑CTGCCGCTTTT‑TTTTTCATCAATCATCCCCATAATCCTTGTTAG‑ATTATCAATTTTAAAAAACTAACAGTTGTCAGCCTGTCCCGCTTATAAGATCATACG > CP042583/577929‑578489
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| Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
