Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A5 F210 I1 R1
|
4929 |
268.4 |
3907572 |
96.3% |
3762991 |
273.2 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,611,023 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,611,023 | 0 | G | C | 99.6%
| 517.0
/ NA
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/1); new base C (108/114); total (109/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
| * | CP042583 | 1,611,024 | 0 | C | G | 99.6%
| 517.1
/ NA
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); major base G (109/113); minor base T (0/1); total (109/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01 |
| * | CP042583 | 1,611,025 | 0 | T | A | 99.6%
| 521.5
/ NA
| 224 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (109/113); minor base C (0/1); total (109/115) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 224 total aligned reads displayed.
TCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGG > CP042583/1610743‑1611299
|||
ttAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCatta > 2:919497/1‑289 (MQ=255)
cgcTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCa > 1:530409/1‑288 (MQ=255)
cTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCg > 1:393876/1‑289 (MQ=255)
ccATTCCCGCTTTGCAGTCCACGCTGCCCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGACACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCAAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCACGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGATTCATTATTGGCAGCGAAAactgatgc > 1:1162906/1‑283 (MQ=255)
ccATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTTAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTGTGTTGATAATCCCGTTTTACGCTCGCGGCCATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GCGACCGACTTTCTGGTTTCCTTATTTGCAGCGAAAacttaatg > 2:1143437/1‑283 (MQ=255)
cATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAactgatgcg < 2:1498082/289‑8 (MQ=255)
cccGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATAACGTTTTACGCTCGCGGCAATTACGGCAGCATCCAGATCTTCACACTTTGGTCAA‑GTGACCGACTTGCGGGTTTCATTATTGGCAGCGAAAactgaggcacag > 2:895108/1‑278 (MQ=255)
gCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 1:604442/289‑1 (MQ=255)
agagaccggTCCACGCTGACCTGGTAATGAATATCGGCTCTATTACCACGCACGGTTAGCGGGACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCTCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCATATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag < 2:1408590/281‑1 (MQ=255)
tttGCAGTCCATGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑aa < 1:1022835/289‑1 (MQ=255)
cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:672809/289‑1 (MQ=255)
cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:572118/289‑1 (MQ=255)
cACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaacaac < 1:180268/289‑1 (MQ=255)
gCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAg > 1:1458804/1‑288 (MQ=255)
tGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGcc > 2:932633/1‑288 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCCACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCAGCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATCATTGTCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCACTaa > 2:151141/1‑289 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag > 2:165435/1‑270 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCaaccacttgtctct > 1:1408590/1‑281 (MQ=255)
ccTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTaa > 1:1354776/1‑289 (MQ=255)
gAATATCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGccc > 1:227783/1‑288 (MQ=255)
tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACACTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTCCGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACATGCTGGCTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCttt > 1:23520/1‑289 (MQ=255)
tCGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCttt > 1:93126/1‑289 (MQ=255)
cGGCACTTTTACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCtttt > 2:1141754/1‑289 (MQ=255)
aaatttgACCACTCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGCATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGTGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCtttttt < 2:1601489/285‑1 (MQ=255)
tttACCACGCACGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATg < 1:1140255/289‑1 (MQ=255)
tttACCACGACCGGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATg < 1:1143437/289‑1 (MQ=255)
cacccgcccgGTTAGCGGTACTGACCCTTTATCATCATTACCCTGAATGTCCTGCACACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttt < 2:1634154/285‑1 (MQ=255)
cacgcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:1507933/289‑1 (MQ=255)
gcacgGTTAGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTtctc < 2:1857321/289‑1 (MQ=255)
aGCGGTACTGACCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGcac < 1:397063/289‑1 (MQ=255)
ggtactgaccATTTATCATCTTTACCCGGAATGTCCTGCAAACTGACCCAAGCCACGGGAGCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACaa < 2:654801/280‑1 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGCTTTTGTTGAAAATAACGTTTTACGCTCGCGGCATTTCCGCAAGAATCCAGATCTTCAAACTTGGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCA‑CCAAAACCTAAGCGCAAGGAGTAAACCAACACAAGCCCTAAAAACCACCCTC‑TTTTTTCATGTTTTTTCTCCATTGCACaagaat > 2:1824398/6‑285 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGTAA‑GTGACCGACTTGCTGGTTTCATTATTTGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCCCCTTTTTTCATG‑TTTTTCTCCATCGCACAATGAt > 2:207077/6‑289 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAt > 2:1276542/6‑289 (MQ=255)
actgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGAt > 1:1249651/6‑289 (MQ=255)
tgaccATTTATCATCTTTACCCTGAATGTCCTGTAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCCCAGGCAG‑AAACCATCAACAGCCCTAAAAAAGCCCCTCTTTTTTTCATC‑TTTTTCTCCATTGCCCAATGATTc > 2:1437123/4‑289 (MQ=255)
tgaccATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCgcaggcag > 2:1157613/4‑224 (MQ=255)
accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAg > 2:1107476/2‑289 (MQ=255)
accATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAg > 1:1479751/2‑289 (MQ=255)
ttATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGAAGCGCAGGCCG‑AAACAAACAACAGACCTAAAAACGAACCTCTTTTTTTACAG‑TTTTTTTCCAAAACACAATGATTCAGgagac > 2:576887/1‑288 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCCTCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt < 2:1670220/289‑1 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAC‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGACAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCCCAATGATTCAGGAGAAAGCAt > 2:713989/1‑289 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt < 2:1250511/289‑1 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCAt > 1:807071/1‑289 (MQ=255)
atcTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTCTTTTCATG‑TTTTTCTCCATAGCACCATGATTCAGGACAAAGCAt > 2:1468729/1‑289 (MQ=255)
cTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGCTTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGCAAGCATgg > 2:1425660/1‑289 (MQ=255)
tttACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGt < 1:1276542/289‑1 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTAc < 1:1211899/289‑1 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCATAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATCATTCAGACGAAAGCATGGTAc > 2:1075260/1‑289 (MQ=255)
tACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGACCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCCTCATAACAAAATGATTCAGTACAAAGCATGGTAc > 2:135702/1‑289 (MQ=255)
aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCCCACTGATTCAGGAGAAAGCATGGTACAAAttt > 2:1724889/1‑287 (MQ=255)
aaTGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGt > 2:1892664/1‑289 (MQ=255)
tCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCCTGGTACAAATTGTCAgg > 1:1553693/1‑289 (MQ=255)
cTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGa > 1:1539053/1‑288 (MQ=255)
cTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGa > 1:284370/1‑288 (MQ=255)
gCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgcg < 1:667534/289‑1 (MQ=255)
gCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAgcg < 2:125941/289‑1 (MQ=255)
aCTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTGTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAg < 1:1253525/289‑1 (MQ=255)
gCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAg > 1:303856/1‑288 (MQ=255)
cACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAACTTGTCAGGAGCGCAAGTTGCTTCAGGcc > 2:854166/1‑289 (MQ=255)
cGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTCGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAACCGCCCCTCTTTTTTTCATG‑TTTTTCCCCATCGCCCAATGCTTCAGGACAAAGCATGGTACAAATTGTCAGGAGCGAAAGTTGCTTCAGGcccggtgtgc > 2:268904/1‑281 (MQ=255)
ggCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgag < 1:1892664/289‑5 (MQ=255)
cTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTgtgaggca < 2:597140/289‑8 (MQ=255)
cGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAGACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc < 1:1364489/289‑1 (MQ=255)
aaTTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCctct > 1:1462632/1‑289 (MQ=255)
ttttttGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTc < 1:1879926/289‑1 (MQ=255)
tcatcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAg < 2:393876/289‑1 (MQ=255)
tcatcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAg < 2:279588/289‑1 (MQ=255)
atcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGc > 1:1117992/1‑288 (MQ=255)
atcTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGc > 1:551049/1‑288 (MQ=255)
atcTGCCCAACGCGCCACACGTTTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCa < 2:525702/289‑1 (MQ=255)
tGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcg < 1:426554/289‑1 (MQ=255)
gCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcga < 1:1724889/289‑1 (MQ=255)
cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga > 1:1071701/1‑286 (MQ=255)
cgcgCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACcgacga > 2:492772/1‑286 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑ttttt < 1:1104648/174‑1 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg > 1:20723/1‑289 (MQ=255)
cACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTggg < 2:807071/289‑1 (MQ=255)
tgATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGc < 1:204868/289‑1 (MQ=255)
tAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTCGTAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAAATGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATAGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCg < 1:839298/288‑1 (MQ=255)
tttGCGCTCGCGGCAATTACGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGGTTCATTATTGGCAGCGAACACTGATGCGCATGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTGTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 2:1773419/289‑1 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa > 1:1010328/1‑154 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCa < 2:1010328/154‑1 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa < 1:1075260/289‑1 (MQ=255)
tttACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAAGTTGCCGGTTTTCAGaa > 1:1631907/1‑289 (MQ=255)
cGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTCTTTCATG‑TTTTTCCCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCATGTTGCTTCAGGCTGCGTGTGAGGCATCTTCCTATTCGGATTCAGCACCGACGACCTGCGGGTACGGTAATTTGCCGGTTTTCAGACTggg > 2:1089349/1‑288 (MQ=255)
cgcgGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGATTGGTGccg > 2:1929053/1‑287 (MQ=255)
agcaTCCAGGTCGTTACACCTTGGGAAAGGTAACG‑GCTTGCTGGTTTCATTATTGGCAGCGAAAACTTATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTACATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 2:250639/288‑1 (MQ=255)
agcaTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGATGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTg < 1:1425660/288‑1 (MQ=255)
aTCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGtt < 1:1526218/287‑1 (MQ=255)
tCCAGATCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGaa > 1:895573/1‑262 (MQ=255)
ccAGATCTTCGCACGTTGGGAAA‑GTTACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGCTGCGCAGGCAG‑AAACCAACAACAGCCCTAATAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgc < 2:1230644/289‑1 (MQ=255)
aTCTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGcaca < 1:9576/271‑1 (MQ=255)
cTTCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTgccagcca < 2:551049/289‑1 (MQ=255)
ttCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCAAGCCAt > 1:701455/1‑289 (MQ=255)
tCACACTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTCATTTGCCGGTCTTCAGAATGGTTCTCAGCACATCTTTTTGTTCTGCCACCCATa > 2:1748695/1‑289 (MQ=255)
cacaCTTTGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATa > 1:888679/1‑288 (MQ=255)
tttGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCCTGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAgcgaaa < 2:1553693/289‑6 (MQ=255)
tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCGCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCACGTTGCTTCAGGCCGCGTGTGAGGCATCTTCCTCTTCGGATTCAGCACTGACGACCTGTGGGGACGGTAATTTGCCTGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTATGCCAGCAATatcgatagt > 2:1784528/1‑281 (MQ=255)
tGGGAAA‑GTGACCGACTTGCTGGTTTCATTATTGGCAGCGAAAACTGATGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGTGAGGCATCTTc > 1:1751779/1‑189 (MQ=255)
|||
TCAGAAGCCATTAACGCCGCTGATATTCCGCCATTCCCGCTTTGCAGTCCACGCTGACCTGGTAATGAATATCGGCACTTTTACCACGCACGGTTAGCGGTACACTCCATTTATCATCTTTACCCTGAATGTCCTGCAAACTGACCCAAGCCACGGGATCGGCCTGACCGACAATTTTTTGATCATCTGCCCAACGCGCCACGCGATTTTGTTGATAATCACGTTTTACGCTCGCGGCAATTCCGGCAGCATCCAGATCTTCACACTTTGGGAAA‑GTGACGCTCTTGCTGGTTTCATTATTGGCAGCGAAAACACTTGCGCAGGCAG‑AAACCAACAACAGCCCTAAAAACGCCCCTCTTTTTTTCATG‑TTTTTCTCCATAGCACAATGATTCAGGAGAAAGCATGGTACAAATTGTCAGGAGCGCAAGTTGCTTCAGGCCGCGTGACTGGCATCTTCCTCTTCGGATTCAGCACCGACGACCTGTGGGGACGGTAATTTGCCGGTTTTCAGAATGGTGCTCAGCACATCTTTTTGTTCTGCCAGCCATAGGCTAAGG > CP042583/1610743‑1611299
|
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
