Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,625,598 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,625,5980AT98.8% 579.2 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (119/124);  minor base G (2/1);  total (121/125)
Fisher's exact test for biased strand distribution p-value = 6.17e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,5990CG99.2% 573.2 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (119/125);  minor base T (2/0);  total (121/125)
Fisher's exact test for biased strand distribution p-value = 2.41e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,6000TA99.2% 579.5 / NA 246intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (121/123);  minor base G (0/2);  total (121/125)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 246 total aligned reads displayed.

CGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT  >  CP042583/1625321‑1625876
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
cGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcga                                                                                                                                                                                                                                                                             >  1:439904/1‑286 (MQ=255)
  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                                                                                                                                                                                                                                            >  1:784031/1‑284 (MQ=255)
  aaaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACGGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                                                                                                                                                                                                                                            >  1:1183598/1‑284 (MQ=255)
   aaCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaac                                                                                                                                                                                                                                                                           >  2:300898/1‑283 (MQ=255)
         cagcagCGACATTCAACATTTCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    <  1:1492872/289‑1 (MQ=255)
         cAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCCCGCAACGGTGAAGTCAGGGAACCTgccc                                                                                                                                                                                                                                                                     >  2:1322015/1‑286 (MQ=255)
         cAGCATCGACATTCAAATCACCCAGCGCCTGGGCAGCGATATCTGCCGAGATGGTGCCAGCGTGCTGCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    <  2:634644/289‑1 (MQ=255)
              tCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGGGCTTCACTTCGGCGAAATCACGCACTAGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                                                                                                                                                                                                                                               <  2:954531/289‑1 (MQ=255)
              tCGACATTCAACATAGCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                                                                                                                                                                                                                                               <  1:1104003/289‑1 (MQ=255)
               cGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGt                                                                                                                                                                                                                                                              >  1:91177/1‑289 (MQ=255)
                 aCATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGtt                                                                                                                                                                                                                                                             >  1:557506/1‑288 (MQ=255)
                         cATACCCAGGGCCTGGGCAGCGAAATCTGCCGGGATGGGGCCATCGTGCTTCACTTCGGCCAAATCACGCACGCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATc                                                                                                                                                                                                                                                    <  2:513740/289‑1 (MQ=255)
                                    ccTGGGCCGCGAGATCTGCCGAGATGGTGCCCTGGTGCTTCCCTTCGGCGAAGTCACGCCATCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcg                                                                                                                                                                                                                                          <  2:1571886/288‑1 (MQ=255)
                                        agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACggcggc                                                                                                                                                                                                                                     >  1:727323/1‑289 (MQ=255)
                                            gcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTAGCACAATACCAAAACGCTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCCCCAATCAGGGTAAACGGCGGCaaa                                                                                                                                                                                                                                  >  2:74922/1‑288 (MQ=255)
                                              gATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc                                                                                                                                                                                                                                <  2:1366748/288‑1 (MQ=255)
                                              gATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc                                                                                                                                                                                                                                <  1:506848/288‑1 (MQ=255)
                                               atatCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCTCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCaa                                                                                                                                                                                                                              >  1:1627713/1‑289 (MQ=255)
                                                     gccgggagggTGCCATCGTGCTTCACTTCGGCGAAATCACGAACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTaa                                                                                                                                                                                                                        <  2:1679712/281‑1 (MQ=255)
                                                       cgagATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGCCTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGCTGCACAATACCACAACGGTCGCGCAACGGTTATGTCAGCGAACCTGCCAGCGTGGTTGCACCAATCAGGCTAAAACGCGGCAAAACAATTTTAATg                                                                                                                                                                                                                      >  2:1656453/4‑289 (MQ=255)
                                                            tGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCACGCGTGGTTGCAACAATACGGGTAAACGGCGGCAAATCAATTTTAATGGATCg                                                                                                                                                                                                                 >  2:788905/1‑289 (MQ=255)
                                                              gTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGt                                                                                                                                                                                                                <  1:1309093/288‑1 (MQ=255)
                                                                gCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgcc                                                                                                                                                                                                             >  1:1750908/1‑289 (MQ=255)
                                                                gCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGATGCACCAATTAGGGTTAACGGGGGCAAATCCCTTTTacatgtacgttc                                                                                                                                                                                                              >  2:1876327/1‑277 (MQ=255)
                                                                   aTCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgcc                                                                                                                                                                                                          <  1:224674/289‑1 (MQ=255)
                                                                    tCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCCAGCCCCATAACGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGccgccg                                                                                                                                                                                                         >  1:719570/1‑289 (MQ=255)
                                                                         cTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCt                                                                                                                                                                                                    >  1:1032512/1‑289 (MQ=255)
                                                                          ttactttCGGCGAAACCACGCACCCGACGCAGCAGACGGTTGGCAATGCGGGGCGTACCGCGAGCGCGAAGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCtt                                                                                                                                                                                                   <  2:1736708/284‑1 (MQ=255)
                                                                          ttCACTTCGGCGAAATCACGCACTCGACGCAGCAAACGGTTGGCAATGCGCGGCGAACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAATCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGTTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCtt                                                                                                                                                                                                   <  1:1437825/289‑1 (MQ=255)
                                                                                 cGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc                                                                                                                                                                                                                                >  1:1570152/1‑253 (MQ=255)
                                                                                    cGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATGTTAATGGAGCGTGCCGCCGGACCTTCACCcatcat                                                                                                                                                                                         >  1:1828667/1‑289 (MQ=255)
                                                                                       aaTCCCGCACACGCCGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGa                                                                                                                                                                                       <  1:759101/288‑1 (MQ=255)
                                                                                                           agACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCACCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTAAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTCGGTAGTCTTCCa                                                                                                                                                                  >  1:1587614/1‑289 (MQ=255)
                                                                                                            ggcGGTTGGGAAGGCGGGGGGGACCGCGAGCGCGACGAGCACCGTCCAGCGCGCGGTCATCACGCAGCTCAAGCGCCAGAAAGCGTGGGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGAACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCa                                                                                                                                                                  <  2:605747/286‑1 (MQ=255)
                                                                                                             gtgggtGGCAACGCCCGGCCTGCAGCGAGCGCGAAGAGCAACTTCCAGCGAGCCGTCATCACTCAGCTCATGCCCCATAAAGCGTGCGCTGCGACTGACGATATAAGGCAGTGCCGGCACCTGCTAAAACTCCAGACGTTGAACAATACGAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCTCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGTGCGTGCCGCCGGACCTTCACCAATCATGATAGCCAGTTGGTAGTCTTCCAtt                                                                                                                                                                <  2:555494/284‑1 (MQ=255)
                                                                                                               ggTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTg                                                                                                                                                               >  1:454027/1‑288 (MQ=255)
                                                                                                                 ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc                                                                                                                                                             <  2:726618/288‑1 (MQ=255)
                                                                                                                 ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc                                                                                                                                                             <  2:1641064/288‑1 (MQ=255)
                                                                                                                 ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc                                                                                                                                                             <  1:300898/288‑1 (MQ=255)
                                                                                                                       aTGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACa                                                                                                                                                      >  2:1452869/1‑289 (MQ=255)
                                                                                                                        tGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTACGCACGTGGTTGCACCAATCCGGGTAAACGGCAGCAAATCAATTTTAATGGAGCGTGCCGCCCGACATTCATCAATCATGAAATCAAGTTGGTAGGCTTAATTTGCCggtaacc                                                                                                                                                      >  2:1351525/1‑283 (MQ=255)
                                                                                                                          cgcgGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGc                                                                                                                                                    >  1:497091/1‑288 (MQ=255)
                                                                                                                           gcggcgTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGc                                                                                                                                                    >  1:1811897/1‑287 (MQ=255)
                                                                                                                                  aCCGCGAGGGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACttcttc                                                                                                                                            <  1:251355/288‑1 (MQ=255)
                                                                                                                                  aCCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTca                                                                                                                                           >  1:1421468/1‑289 (MQ=255)
                                                                                                                                       gAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATTTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCaacaac                                                                                                                                      <  1:1351525/289‑1 (MQ=255)
                                                                                                                                         gcgcGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCa                                                                                                                                                                                                                                                          >  2:124289/1‑171 (MQ=255)
                                                                                                                                          cgcgACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTg                                                                                                                                    <  1:1683963/288‑1 (MQ=255)
                                                                                                                                           gcgACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATCTCCAGTTGGTAGTCTTCCATTGACGGTGACAGCACTTCTTCAACAACTggc                                                                                                                                  >  2:1760592/1‑288 (MQ=255)
                                                                                                                                             gacgcGCAACTTCCAGCGCGCCGTCATCCCTCATCTAAAACCCCATAAAGCGTGCGCGGCACCTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcga                                                                                                                                <  2:417864/289‑4 (MQ=255)
                                                                                                                                             gacgaGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcga                                                                                                                                >  2:493024/1‑286 (MQ=255)
                                                                                                                                               cgaGGAAGTTCCAGCGCGCCGTCTACACCCATCCAAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGGCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgata                                                                                                                              <  2:1581344/289‑6 (MQ=255)
                                                                                                                                               cgaGCCACGTCCAGCGCGCCGACATCACTCAACTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAGAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgata                                                                                                                              <  2:249000/289‑6 (MQ=255)
                                                                                                                                               cgaGCAACTTCCAGCGGGCCGGCATCACTCATCTCACGCCCCATAAAGCGTGCGCTGAGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAAGACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgata                                                                                                                              <  2:1811897/289‑6 (MQ=255)
                                                                                                                                               cgaGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgata                                                                                                                              <  1:1043498/289‑6 (MQ=255)
                                                                                                                                                         ccAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                    <  2:1872163/289‑1 (MQ=255)
                                                                                                                                                         ccAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                    <  1:1595796/289‑1 (MQ=255)
                                                                                                                                                         ccAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAt                                                                                                                    <  1:1259220/289‑1 (MQ=255)
                                                                                                                                                              gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                  <  1:1688010/286‑1 (MQ=255)
                                                                                                                                                              gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                  <  2:261704/286‑1 (MQ=255)
                                                                                                                                                              gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                  <  1:1452869/286‑1 (MQ=255)
                                                                                                                                                              gcaccGTCATCACTCATCTCAAGCCCCATCACGCGTGCGCTGCGACTTACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                  <  2:930068/283‑1 (MQ=255)
                                                                                                                                                                gcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCtcatca                                                                                                             <  1:197844/289‑1 (MQ=255)
                                                                                                                                                                       tcaCTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACa                                                                                                      <  1:1231266/289‑1 (MQ=255)
                                                                                                                                                                         aatCATCTCAAGCCCCATAAGGCGTGCGCTGCGACTGACAGAATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGc                                                                                                    <  2:784031/287‑1 (MQ=255)
                                                                                                                                                                               ctcAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCa                                                                                              >  1:621792/1‑289 (MQ=255)
                                                                                                                                                                                     ccccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGt                                                                                        >  2:1126794/1‑289 (MQ=255)
                                                                                                                                                                                      cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                       <  2:439904/289‑1 (MQ=255)
                                                                                                                                                                                        cATAAATCGGGCGCTGCGACTAACGATATATTGCAGCTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGCCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCa                                                                                     <  2:152054/289‑1 (MQ=255)
                                                                                                                                                                                         aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCaa                                                                                    >  1:314495/1‑289 (MQ=255)
                                                                                                                                                                                                ttGCGCTGCGACTGACGTTATATGGCAAATCCGGCACCTGATAGAACTCCAGACTTTGCACAATACCAAGACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGt                                                                             <  1:697444/288‑1 (MQ=255)
                                                                                                                                                                                                gTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                       <  2:1820580/279‑1 (MQ=255)
                                                                                                                                                                                                gTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGt                                                                             >  2:716026/1‑289 (MQ=255)
                                                                                                                                                                                                  gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                       <  2:1743834/277‑1 (MQ=255)
                                                                                                                                                                                                           cTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGAACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAg                                                                  <  2:1927950/289‑1 (MQ=255)
                                                                                                                                                                                                                  tatatTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCCGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGTTAGACGGTGGTTCTCATCAATCAACCGCACGTCATTCCGTTTAAGGTTAGTTAGCCACGCCACCAAAt                                                            >  2:1693416/1‑288 (MQ=255)
                                                                                                                                                                                                                  tatatTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAATAACTGGCGATAAACGGTGGATCTCATCAATAAACAGCTCGCCATGCGGTTCAAGGATAGTGAGCATCGCAGCCAAATc                                                           >  1:259615/1‑289 (MQ=255)
                                                                                                                                                                                                                  tatatTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAAt                                                            >  1:1909982/1‑288 (MQ=255)
                                                                                                                                                                                                                        gCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTg                                                                                                                                                                                                               <  1:39874/135‑1 (MQ=255)
                                                                                                                                                                                                                        gCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCaa                                                                                    <  1:990404/258‑1 (MQ=255)
                                                                                                                                                                                                                        gCAGATCCGGCACCTGATAAAACTCCAGACGATGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCCCCAATCCTGATATCCAGTTGGTAGTCTTCCATCGCCGCGTACAGCCCTTCGTCCACAACTGTAGATAGACGGGGGATCCCACGAATAAACATCCCCGCATGCGGCTCAAGGTGAGGGACTATCGCAGcgcacagcccgg                                                      >  2:1036461/1‑277 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAACCAAATCGCCCGCCttt                                                 >  2:336049/1‑289 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCtttt                                                >  2:1423475/1‑288 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCtttt                                                >  2:530219/1‑288 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCAGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTTCCGCCGGACCTTCACCAATCATGATATCCAGTCGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATTGACGGTGGATCTCATCAATCAACAGCCCGTCATCCGGTTCAAGGTTAGTGAGCCTCGCAGCCCAAAAGCCCGACtttt                                                >  2:147945/1‑288 (MQ=255)
                                                                                                                                                                                                                                    acggATAAAACTCCAGACATTGCACGATACCAAACCGGTCGCGCAACGGTGATGGCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCAc                                         <  2:1268784/286‑1 (MQ=255)
                                                                                                                                                                                                                                       gATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCTCAGCCAAATCGCCCGCCTTTTCCAGCACCgg                                      >  2:1085885/1‑289 (MQ=255)
                                                                                                                                                                                                                                              cTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGaa                               >  1:3892/1‑289 (MQ=255)
                                                                                                                                                                                                                                                 cAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgata                                                                                                                              >  1:1821248/1‑186 (MQ=255)
                                                                                                                                                                                                                                                  aGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCg                           >  2:1018911/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  aGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCg                           >  1:1158423/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGc                        <  1:650759/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      gTTGCACAATACTAAATCGGGCGAGCAACGGTGGTGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCCAGTTTAATGGAGCGTGCCGCCGGAGCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTAAAGCACGTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCg                       <  2:1828667/289‑1 (MQ=255)
                                                                                                                                                                                                                                                      gTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCg                       <  2:661110/289‑1 (MQ=255)
                                                                                                                                                                                                                                                             aaTACGAAAACGGTCGAGCAACGGTGATGTCAGCGAACCTGCGCGGGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTa                <  2:1777673/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCa    >  1:937795/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCa    >  2:232744/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCa    >  2:1943069/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          tCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCa    <  1:1383395/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                           cgcgCAACGGTGATGTAAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCAt   <  1:788905/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
CGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT  >  CP042583/1625321‑1625876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A