Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,625,598 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,625,5980AT100.0% 558.5 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base T (121/115);  total (121/115)
*CP0425831,625,5990CG99.2% 544.8 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (119/113);  total (121/115)
Fisher's exact test for biased strand distribution p-value = 4.98e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,625,6000TA100.0% 557.9 / NA 236intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base A (121/115);  total (121/115)

Only 100 of 236 total aligned reads displayed.

CGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT  >  CP042583/1625321‑1625876
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
    aCCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAgcgaa                                                                                                                                                                                                                                                                            >  1:1011348/1‑282 (MQ=255)
         cagagtCGACATTCAACGTAGCAAGCGCTTGGGCAGCGGTTTCTGCCGGGATGGGGCCATCGGGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    <  2:1712795/284‑1 (MQ=255)
         cAGCACCGACATTCAACCGATCCAGCGCCTGGGCATCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    <  2:955972/289‑1 (MQ=255)
              tCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTgg                                                                                                                                                                                                                                                               <  1:1710853/289‑1 (MQ=255)
               cGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGt                                                                                                                                                                                                                                                              >  1:347831/1‑289 (MQ=255)
                                 gcgcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTaaa                                                                                                                                                                                                                                            >  2:1966021/1‑289 (MQ=255)
                                  cgcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTACCCCCGTGGTTGCACCAATACGGGTAAAc                                                                                                                                                                                                                                           >  2:1725485/1‑289 (MQ=255)
                                   gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcg                                                                                                                                                                                                                                          >  1:1169794/1‑289 (MQ=255)
                                   gcCTGAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcg                                                                                                                                                                                                                                          >  1:1060460/1‑289 (MQ=255)
                                       gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    <  2:1377620/259‑1 (MQ=255)
                                       gAGCAGCGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcg                                                                                                                                                                                                                                                                    >  1:1377620/1‑259 (MQ=255)
                                        agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCCGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTCAACggcggc                                                                                                                                                                                                                                     >  2:758685/1‑289 (MQ=255)
                                        agcagcGATATCTGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACggcggc                                                                                                                                                                                                                                     >  1:129449/1‑289 (MQ=255)
                                        agcagcGATACCGGCCGAGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAAcggcgg                                                                                                                                                                                                                                      <  1:1725485/288‑1 (MQ=255)
                                                  tctgccgagATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGTGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAAttt                                                                                                                                                                                                                           >  2:237149/9‑289 (MQ=255)
                                                       cgagATGGTGCCATCGTGCTTCACTTCGGCGGAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcgc                                                                                                                                                                                                                                                                   <  2:1774864/241‑1 (MQ=255)
                                                       cgagATGGTGCCATCGTGCTTCACTTCGGCGGAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTgcgcgc                                                                                                                                                                                                                                                                   >  1:1774864/4‑244 (MQ=255)
                                                          gATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCCTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACGCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCGGCGCTCGTGTATGCACCAGTCACGGTCAAGGGCGACAAATCGATTTTAATTGAg                                                                                                                                                                                                                   >  2:1949041/1‑289 (MQ=255)
                                                             ggggCCATCGCGCTTCACTCCGGCGAAATCCAGCACTCGACGCAGCAGACGGTTGGCAACGCGCGGCGTACGGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCg                                                                                                                                                                                                                 <  2:1055047/285‑1 (MQ=255)
                                                             ggTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGt                                                                                                                                                                                                                <  1:1784961/289‑1 (MQ=255)
                                                                    tCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgcc                                                                                                                                                                                                          >  2:1184635/1‑288 (MQ=255)
                                                                        gCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGAcc                                                                                                                                                                                                     <  1:1669041/289‑1 (MQ=255)
                                                                           tCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCtt                                                                                                                                                                                                   >  1:1155753/1‑288 (MQ=255)
                                                                              ctgcGGCGAAAGCCCGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCAcc                                                                                                                                                                                               <  2:129449/286‑1 (MQ=255)
                                                                               ttCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCa                                                                                                                                                                                              >  2:37708/1‑289 (MQ=255)
                                                                                 cGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCAGCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCCATCAGGGTAAACGGCGGCAAATCCATTTTAATGGAGCGTGCCGCCGGACCTTccacaa                                                                                                                                                                                             >  2:174963/1‑283 (MQ=255)
                                                                                  ggCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATc                                                                                                                                                                                           <  1:1612233/289‑1 (MQ=255)
                                                                                   gCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCATACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCa                                                                                                                                                                                          >  1:543229/1‑289 (MQ=255)
                                                                                    cGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCa                                                                                                                                                                                          <  2:1155753/288‑1 (MQ=255)
                                                                                    cGAAAGCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCa                                                                                                                                                                                          <  1:1585067/288‑1 (MQ=255)
                                                                                       aaTCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGGACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATAACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGTCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGat                                                                                                                                                                                      <  1:1042065/289‑1 (MQ=255)
                                                                                                   gACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTa                                                                                                                                                                          >  1:342075/1‑289 (MQ=255)
                                                                                                          cagACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGAAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAAACATCATATCCAGTTGGTAGTCTTc                                                                                                                                                                    >  1:940454/1‑288 (MQ=255)
                                                                                                           agACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCa                                                                                                                                                                  >  2:657847/1‑289 (MQ=255)
                                                                                                                 ttGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc                                                                                                                                                             <  1:1643915/288‑1 (MQ=255)
                                                                                                                          cggggcgTACCGCGGGCGCGACGAGCAACCTCCAGCGAGCCATAATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGc                                                                                                                                                    <  2:1884995/285‑1 (MQ=255)
                                                                                                                          cgcgGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGAACCAATCAGGGTAAACGGCGGCAAATCACTTTTAATGGAGCGGTCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGCCTTCCATTGCCGGGtcccgc                                                                                                                                                    >  2:1821037/1‑283 (MQ=255)
                                                                                                                             gcggcaccacggcggcgACCGGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGGGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCCAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAct                                                                                                                                                 <  2:4509/274‑1 (MQ=255)
                                                                                                                               cgTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCaa                                                                                                                                                                                             >  1:1281005/1‑242 (MQ=255)
                                                                                                                               cgTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCActtct                                                                                                                                              >  2:1593554/1‑289 (MQ=255)
                                                                                                                               cgTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCActtct                                                                                                                                              >  2:1002849/1‑289 (MQ=255)
                                                                                                                                      cgAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTcaaca                                                                                                                                        >  2:197834/1‑288 (MQ=255)
                                                                                                                                       gAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTcaacaa                                                                                                                                       <  1:1032910/288‑1 (MQ=255)
                                                                                                                                       gAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCaacaac                                                                                                                                      <  1:37708/289‑1 (MQ=255)
                                                                                                                                       gAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCaacaac                                                                                                                                      <  1:1347150/289‑1 (MQ=255)
                                                                                                                                         gcgcGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTGACCAATCCTGATAACCAGTTGGTAGTCTTCCATTGCCGGGTTCAGCACTTCTTCAACCACTg                                                                                                                                    >  2:567675/1‑289 (MQ=255)
                                                                                                                                         gcgcGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTg                                                                                                                                    >  2:1828919/1‑289 (MQ=255)
                                                                                                                                              acgaGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTggcgat                                                                                                                               >  1:696374/1‑285 (MQ=255)
                                                                                                                                                    aaCTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACgg                                                                                                                         <  1:900415/289‑1 (MQ=255)
                                                                                                                                                       ttCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTgg                                                                                                                      <  1:643435/289‑1 (MQ=255)
                                                                                                                                                         cccgccccccGTCACCGCGCATCTCAAGCCCCATAACGAGTGCGCTTCGAATGACGATATATTGCAGATCCGGCACCGGATAAACCTCCAGACGTTGAACAATACCAGGACGGTCGCGGAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGTTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCGGGACCTTCAACAATCATGATATCCCGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACGACTGGCGATAGACGGTGGAt                                                                                                                    <  2:139472/281‑1 (MQ=255)
                                                                                                                                                              tcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACATCTGGCGATAGACGGTGGAtct                                                                                                                  <  1:1942865/285‑1 (MQ=255)
                                                                                                                                                              gcgcCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGAtct                                                                                                                  <  1:1828919/286‑1 (MQ=255)
                                                                                                                                                                 ccGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGATGCACAATACCAAAACGGTCGCGCAACGGTGATGTAACAGAACCTGCGCGCGTGGTGGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCAGGACCTTCACCCAGCATGCCATCCAGTTGGTAGTCTTCCATTGCCTGGAACCGCACTCTTTGACCACATGGCGACAGACGGTGCATCtcacaca                                                                                                            >  2:349391/1‑285 (MQ=255)
                                                                                                                                                                              tctcAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGcc                                                                                                                                                             <  2:1162002/227‑1 (MQ=255)
                                                                                                                                                                              tctcAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTc                                                                                               >  2:1791909/1‑289 (MQ=255)
                                                                                                                                                                                      cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                       <  1:1966021/289‑1 (MQ=255)
                                                                                                                                                                                      cccATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGtt                                                                                       <  2:342075/289‑1 (MQ=255)
                                                                                                                                                                                         aTAAAGGTTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCaa                                                                                    <  1:1821037/289‑1 (MQ=255)
                                                                                                                                                                                         aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAc                                                                                                                                                  <  2:52660/227‑1 (MQ=255)
                                                                                                                                                                                         aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCAc                                                                                                                                                  >  1:52660/1‑227 (MQ=255)
                                                                                                                                                                                         aTAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCaa                                                                                    >  1:731226/1‑289 (MQ=255)
                                                                                                                                                                                          tAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAg                                                                                   >  2:1634396/1‑289 (MQ=255)
                                                                                                                                                                                                  gcgcTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGa                                                                           >  2:502443/1‑289 (MQ=255)
                                                                                                                                                                                                              aCGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCa                                                                                                                                                                                                 >  2:306789/1‑159 (MQ=255)
                                                                                                                                                                                                              aCGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCa                                                               >  2:296584/1‑289 (MQ=255)
                                                                                                                                                                                                                        gCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgcc                                                                                                                                                                                                          <  1:1178562/140‑1 (MQ=255)
                                                                                                                                                                                                                         cAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc                                                                                                                                                                                                                                <  2:867769/117‑1 (MQ=255)
                                                                                                                                                                                                                         cAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATc                                                                                                                                                                                                                                >  1:867769/1‑117 (MQ=255)
                                                                                                                                                                                                                         cAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccg                                                      >  2:545046/1‑287 (MQ=255)
                                                                                                                                                                                                                          aGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                    <  1:458162/288‑1 (MQ=255)
                                                                                                                                                                                                                          aGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                    <  1:502443/288‑1 (MQ=255)
                                                                                                                                                                                                                          aGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                    <  1:1111247/288‑1 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAGAcggcgg                                                                                                                                                                                                                                      >  2:1027099/1‑108 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTgccgc                                                                                                                                                                                                           >  1:238118/1‑135 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCCACAACTGGCGATAGACGGTGGATCTCAGCAATAAACAGCACGTCATGCGGTTCAAGGGTATGGATGATCGCAGCCAAACACCCCGCAttt                                                 >  2:1050257/1‑289 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                            >  1:1886593/1‑246 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                            <  2:1886593/246‑1 (MQ=255)
                                                                                                                                                                                                                            aTCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCttt                                                 >  1:896871/1‑289 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTc                                                                                                                                                                       >  2:494406/1‑169 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTc                                                                                                                                                                       <  1:494406/169‑1 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                    >  2:1658302/1‑284 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATcgcccgcc                                                    <  1:1658302/284‑1 (MQ=255)
                                                                                                                                                                                                                              ccGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGCGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCCTCAATAAACAGCACGTCATGCGGTTCAAGGTGAGTGAGCATCTCAGCCAAATCCCCCGCCtttt                                                >  2:1445191/1‑288 (MQ=255)
                                                                                                                                                                                                                                       gATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCgg                                      >  2:611761/1‑289 (MQ=255)
                                                                                                                                                                                                                                        ctAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGCTCATGTCAGCGAACCTGCGCGCGCGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTCATGGAGCGTGCCGCCGGCACTTCACCCATCATGATACCCAGCTGGTAGTCTTCCCTTTCCGGGTAAACCGCTTCTTCAACAACTGGCGATAGACGCTGGCTCGCCACAATAAACACCACGTCATGCGTGTCAAGGACACTTAGCCTCCCAGCCAAATCGACCGACtttctgagccccgg                                      >  2:1245469/2‑277 (MQ=255)
                                                                                                                                                                                                                                         tAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGAc                                    <  1:1500119/289‑1 (MQ=255)
                                                                                                                                                                                                                                            atctcaggtagTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACAAATGCGGGTAAACGGCTGCAAATCAACTTTAATGGAGCGCGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGGGCATCGCAGCCAAATCGCTCGCCTTTTCCAGCACCGGACCAg                                 <  2:1094005/279‑1 (MQ=255)
                                                                                                                                                                                                                                               tCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAg                              >  1:1522818/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  aGACGTTGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAAc                                                                                                       <  1:1404610/213‑1 (MQ=255)
                                                                                                                                                                                                                                                        tGCACAATACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTa                     <  1:955171/289‑1 (MQ=255)
                                                                                                                                                                                                                                                               tACCAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCa                                                                                                                                                                                                 <  2:1042945/110‑1 (MQ=255)
                                                                                                                                                                                                                                                                  cAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATTCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCCCCGGGCCAGAAGTCATGCGCAAATTAACGc            >  2:926135/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                  cAAAACGGTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGc            >  2:839107/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCaa                                                                                                                                                                                             <  1:985482/104‑1 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCaa                                                                                                                                                                                             >  2:985482/1‑104 (MQ=255)
                                                                                                                                                                                                                                                                         gTCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTAAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACAAGAAGTCGTGCGTAAATTAACGCCCATTTCa    >  1:120507/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          tCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGCTATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCATTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGCCATGCCGATCAAGGTTAGTGCGCATCGCAGCTAAAACCCCCCCCTTTTCCACGCCCGGACAACAACTCGTGCGTCAATCCACCCCCATTTCAt   >  2:1335219/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                          tCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATg                                                                                            >  2:1409452/1‑200 (MQ=255)
                                                                                                                                                                                                                                                                          tCGCGCAACGGTGATGTCAGCGAACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGCGATAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGGCGTCCGTAAATTACAGCCCCTTTCAt   >  2:1495323/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                                     |||                                                                                                                                                                                                                                                                                    
CGAAACCTTCAGCATCGACATTCAACATATCCAGCGCCTGAGCAGCGATATCTGCGCTGATGGTGCCATCGTGCTTCACTTCGGCGAAATCACGCACTCGACGCAGCAGACGGTTGGCAATGCGCGGCGTACCGCGAGCGCGACGAGCAACTTCCAGCGCGCCGTCATCACTCATCTCAAGCCCCATAAAGCGTGCGCTGCGACTGACGATATATTGCAGATCCGGCACCTGATAAAACTCCAGACGTTGCACAATACCAAAACGGTCGCGCAACGGACTTGTCAGGCTACCTGCGCGCGTGGTTGCACCAATCAGGGTAAACGGCGGCAAATCAATTTTAATGGAGCGTGCCGCCGGACCTTCACCAATCATGATATCCAGTTGGTAGTCTTCCATTGCCGGGTACAGCACTTCTTCAACAACTGGGCTTAGACGGTGGATCTCATCAATAAACAGCACGTCATGCGGTTCAAGGTTAGTGAGCATCGCAGCCAAATCGCCCGCCTTTTCCAGCACCGGACCAGAAGTCGTGCGTAAATTAACGCCCATTTCATT  >  CP042583/1625321‑1625876

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A