Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,646,822 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,646,8220GC99.0% 479.1 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  major base C (91/114);  minor base A (1/1);  total (92/116)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01
*CP0425831,646,8230CG99.0% 474.4 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (90/116);  total (92/116)
Fisher's exact test for biased strand distribution p-value = 1.94e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01
*CP0425831,646,8240TA98.5% 472.3 / NA 208intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (91/112);  minor base C (1/2);  total (92/116)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.72e-01

Only 100 of 208 total aligned reads displayed.

GTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTC  >  CP042583/1646542‑1647097
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
gTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGGTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCAt                                                                                                                                                                                                                                                                              >  1:1785841/1‑289 (MQ=255)
     cTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGc                                                                                                                                                                                                                                                                          <  1:1420450/288‑1 (MQ=255)
        tggtggGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGcc                                                                                                                                                                                                                                                                      <  1:1775496/289‑1 (MQ=255)
        tggtggGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGc                                                                                                                                                                                                                                                                       >  1:1101820/1‑288 (MQ=255)
           tggGAAAAAGCCCTAAATTGTTACCGAAAAAACGATCATAACGAGCTTTTCGCTTGTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCa                                                                                                                                                                                                                                                                    <  2:1545911/288‑1 (MQ=255)
           tggGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCa                                                                                                                                                                                                                                                                    <  2:294195/288‑1 (MQ=255)
           tggGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCa                                                                                                                                                                                                                                                                    <  1:1471682/288‑1 (MQ=255)
           cgggAAACAACGCTAAATTGTTGCAGAAAAAAGCATCCGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTACGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCa                                                                                                                                                                                                                                                                    <  2:1441633/287‑1 (MQ=255)
            gggAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCAc                                                                                                                                                                                                                                                                   <  1:954734/288‑1 (MQ=255)
            gggAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACt                                                                                                                                                                                                                                                                  <  1:1340777/289‑1 (MQ=255)
              gAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTgg                                                                                                                                                                                                                                                                >  1:733786/1‑289 (MQ=255)
              gAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTgg                                                                                                                                                                                                                                                                >  2:955954/1‑289 (MQ=255)
              gAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTgg                                                                                                                                                                                                                                                                >  2:1782935/1‑289 (MQ=255)
                 aaaaCGATAAGTGGTTGCAGAAAAAAGCATCCGCAATGGCGTTTCACTTTTTGCTTGTAACGTTAGAAGGTCACCGATGCCAGCAGGATTAAGCCGCGAAACACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCa                                                                                                                                                                                                                                                             <  2:50008/289‑1 (MQ=255)
                      gCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                        <  1:876726/289‑2 (MQ=255)
                                tgCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGaa                                                                                                                                                                                                                                              >  2:52897/1‑289 (MQ=255)
                                    gAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGaataat                                                                                                                                                                                                                                          >  2:1791209/1‑289 (MQ=255)
                                         aaGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTgg                                                                                                                                                                                                                                                                           >  1:375513/1‑251 (MQ=255)
                                                  aCAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGct                                                                                                                                                                                                                             <  1:1026401/288‑2 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCTAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                         >  1:1667367/1‑283 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCt                                                                                                                                                                                                                                   >  1:1839847/1‑278 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                         >  2:450806/1‑283 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACAGCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgaaa                                                                                                                                                                                                                         >  1:845305/1‑283 (MQ=255)
                                                       gCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGct                                                                                                                                                                                                                             <  1:1413276/283‑2 (MQ=255)
                                                          tttCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTAATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTaaccctgagacccg                                                                                                                                                                                                                     >  2:1704506/1‑275 (MQ=255)
                                                                     gCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AAc                                                                                                                                                                                                        <  1:52897/289‑1 (MQ=255)
                                                                      cTTGTAACTGACGAGGGTCACCGCTGCCGGCAGGATGAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACGCGCCACCACATATGAGATGTTTCCGATGCCACCTTTCAGAGAAACGTCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGCCGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACa                                                                                                                                                                                                       <  2:1088080/289‑1 (MQ=255)
                                                                                        cACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTg                                                                                                                                                                                     <  1:450806/289‑1 (MQ=255)
                                                                                          ccGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCg                                                                                                                                                                                   <  1:957576/289‑1 (MQ=255)
                                                                                                ccAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGaacaa                                                                                                                                                                              >  2:254007/1‑288 (MQ=255)
                                                                                                        aTTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTa                                                                                                                                                                        <  1:800670/286‑1 (MQ=255)
                                                                                                          tAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACAccc                                                                                                                                                                   >  1:1656151/1‑289 (MQ=255)
                                                                                                             gCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGcctgag                                                                                                                                                                                                              <  1:1222329/244‑5 (MQ=255)
                                                                                                             gCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGcctgag                                                                                                                                                                                                              >  2:1222329/1‑240 (MQ=255)
                                                                                                                       aCGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTAGCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCgg                                                                                                                                                      <  1:1214235/289‑1 (MQ=255)
                                                                                                                             tGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                >  2:381552/1‑257 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTTGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCg                                                                                                                                              >  1:1036752/1‑289 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTaca                                                                                                                                                                      >  1:415319/1‑265 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCg                                                                                                                                              >  1:813251/1‑289 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCg                                                                                                                                              >  1:737487/1‑289 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAAACGGTACACCCGCCAGACGCGCGGCCTCTTCg                                                                                                                                              >  1:466324/1‑289 (MQ=255)
                                                                                                                                gcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGACATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACACGCGGCCTATTCGt                                                                                                                                             >  2:1745901/1‑289 (MQ=255)
                                                                                                                                    aaGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCGATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTcc                                                                                                                                          >  1:987385/1‑288 (MQ=255)
                                                                                                                                        cgaAATCTTAAGCAGGTTCATGGCGTTTTCCACGGTTCCTAAAAGTAAGATACCCCCCACCACATATGAGATTTTTCCGATGCCACCTTTAAGAGAAACGCCACCTAAAACGCAGGCGGAGATAAAAATCCGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGcc                                                                                                                                      <  2:602678/287‑1 (MQ=255)
                                                                                                                                             tatTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGc                                                                                                                                <  1:1060475/289‑1 (MQ=255)
                                                                                                                                             tatTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGc                                                                                                                                <  1:911728/289‑1 (MQ=255)
                                                                                                                                             tatTAACCAGGTTCATGGCGTTTTCCACGTGTCCTAAAATTAACATACCCGCCACCACAGATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGc                                                                                                                                <  2:138766/289‑1 (MQ=255)
                                                                                                                                              atTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGcc                                                                                                                               <  2:1842417/289‑1 (MQ=255)
                                                                                                                                                  aGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGaacaac                                                                                                                                                                             >  2:1661193/1‑239 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                        >  1:1378099/1‑159 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                        <  2:1378099/160‑2 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                       >  1:305838/1‑288 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                       >  1:1124409/1‑288 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCCCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                       >  2:671695/1‑288 (MQ=255)
                                                                                                                                                        ttCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTAc                                                                                                                     >  2:854525/1‑289 (MQ=255)
                                                                                                                                                         tCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACg                                                                                                                    >  1:292146/1‑289 (MQ=255)
                                                                                                                                                            tcgCGTTATCCACGGTGCCAAACATGAACGTACCCGCCACCACATGTGAGATTTATCCAATACAACCTTTCAGAGAAACGCCCCCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc                                                                                                                 <  2:1698467/287‑1 (MQ=255)
                                                                                                                                                                 ttttCCACGGTGCCTTAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTAC‑CCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggt                                                                                                           >  1:598470/1‑289 (MQ=255)
                                                                                                                                                                 ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCCCCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCAGGCTATCGCTGATAACAGGCCTGAGAG‑AACAAAGATAATAATTTTGTTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCGGGGTGTTACGACCAAAgg                                                                                                            >  1:775967/1‑289 (MQ=255)
                                                                                                                                                                  tttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg                                                                                                            <  1:1267404/288‑1 (MQ=255)
                                                                                                                                                                            gCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc                                                                                                 >  2:1624267/1‑289 (MQ=255)
                                                                                                                                                                             ccTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGTCAATCGCCAGGTTGTTACGACCAAAGGTGGTTCTATTca                                                                                                >  1:1529248/1‑289 (MQ=255)
                                                                                                                                                                             ccTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTca                                                                                                >  1:854436/1‑289 (MQ=255)
                                                                                                                                                                             ccTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTc                                                                                                 >  2:32131/1‑288 (MQ=255)
                                                                                                                                                                             ccTAAAATTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCCCCAATCCCCAGGGTGTTACGACCAAAGGTGGTTTTATTcc                                                                                                >  2:1824303/1‑288 (MQ=255)
                                                                                                                                                                                aaaaTTAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGATGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATACCCAGGGTGTTACGACCAAAGCTGGTCTTATTcagc                                                                                              >  2:335147/1‑288 (MQ=255)
                                                                                                                                                                                     tAAGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTACGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGGTTTATTAAGCAGCaaa                                                                                        >  1:1249448/1‑289 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCAt                                                                                                                                                                                                                                                                              >  2:1937503/1‑106 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCt                                                                                                                                                                                                                                   >  2:908154/1‑149 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCaa                                                                                                               <  1:1518420/264‑1 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc                                                                                      >  1:1929111/1‑289 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAcc                                                                                      >  1:1924274/1‑289 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCAGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGGTACGACCAAAGGTTGTTTTATTCAGCCGCAAAcc                                                                                      >  2:712117/1‑289 (MQ=255)
                                                                                                                                                                                          tACCCGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCaaa                                                                                   <  2:1567105/289‑1 (MQ=255)
                                                                                                                                                                                              cGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                       <  1:1509330/249‑1 (MQ=255)
                                                                                                                                                                                              cGCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                       >  2:1509330/1‑249 (MQ=255)
                                                                                                                                                                                               gCCACCACATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATaa                                                                              <  2:1124409/289‑1 (MQ=255)
                                                                                                                                                                                                  accacATATGAGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCa                                                                           >  2:612701/1‑289 (MQ=255)
                                                                                                                                                                                                    caaatatgagATTTTGCCAATGCCACCTTTCAGAGAAACGCAACCTACAACGCGGGCGGAGATAACAATCAGCTCATAAACAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGa                                                                         <  2:845305/280‑1 (MQ=255)
                                                                                                                                                                                                                  ttCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGAcgcg                                                                                                                                                         >  2:368973/1‑195 (MQ=255)
                                                                                                                                                                                                                  ttCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGAcgcg                                                                                                                                                         <  1:368973/195‑1 (MQ=255)
                                                                                                                                                                                                                        tGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGa                                                      <  2:813251/288‑1 (MQ=255)
                                                                                                                                                                                                                            aCCTTTCAAAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGgc                                                 <  1:1392285/289‑1 (MQ=255)
                                                                                                                                                                                                                             ccTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGgcg                                                <  1:254007/289‑1 (MQ=255)
                                                                                                                                                                                                                                ttCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCgcag                                             <  1:156949/289‑1 (MQ=255)
                                                                                                                                                                                                                                               ccTAAACCGCAGGCGGGGCTAACAATCAGCTCATAACCAGTCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGt                              <  2:1656151/289‑1 (MQ=255)
                                                                                                                                                                                                                                               ccTAAACCGCAGGCGGAGATAACAATCAGCTCATAACCAATCGCCGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGt                              <  1:1192137/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaggagggCGGAAATAACAATCAGCACATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                         <  2:1806787/283‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaCGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                         <  1:1067504/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaCGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                         <  1:928113/289‑1 (MQ=255)
                                                                                                                                                                                                                                                    aaCGCAGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                         <  1:1807491/289‑1 (MQ=255)
                                                                                                                                                                                                                                                        agtaaggAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGAGCGGCCTATTCGTTCCCGCCAATCGCCAGGGTGTTACGCCCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGGCAGATTGGCCACGGCAAGCCGAACCAGTTgggcgcac                     >  2:298023/6‑283 (MQ=255)
                                                                                                                                                                                                                                                         aagggtagaTAACATTCAGCGCATAACCAATAGACGTCATGGGATGCCCACTGGTCAGACGTGAAGCCAGAAGAATTCCGGCTATCGCTGATAACAGGCC‑TGGAGAAACAAAGATAATAATTTTGGTGCTAACAACCGGTACACCCGCCAGACGCGCGGCCTCGTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAAcc                    <  2:1045020/283‑1 (MQ=255)
                                                                                                                                                                                                                                                         aGGCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAgg                                                                                                            <  2:1358794/201‑1 (MQ=255)
                                                                                                                                                                                                                                                          ggCGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACTGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCa                   >  1:1289694/1‑289 (MQ=255)
                                                                                                                                                                                                                                                            gggAGAGAACAATCAGATCTGAACCAGTGGAAGTAATTGGCGGCCCACTGGGCATACGTGAAGCCAGAATAAATCCGGCTAGCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGGTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAAcc                    <  2:1907792/285‑1 (MQ=255)
                                                                                                                                                                                                                                                            cGGAGATAACAATCAGCTCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAAcc                    <  2:768040/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc  <  1:1539664/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                             tCATAACCAATCGACGTCATTGGCTGCCCACTGGTCATACGGGAAGCCAGAATAATTCCGGATATCGCTGATAACAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc  <  2:1176330/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                                 aaCCAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCATCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc  <  1:29790/283‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                  
GTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGATTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAACCAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAG‑AACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTC  >  CP042583/1646542‑1647097

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A