Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A6 F210 I1 R1 4928 340.1 5480506 96.9% 5310610 252.0

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,646,822 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,646,8220GC99.7% 760.7 / NA 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (146/175);  total (147/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
*CP0425831,646,8230CG98.5% 743.0 / ‑5.5 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/3);  new base G (145/172);  total (147/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,646,8240TA99.7% 765.5 / NA 323intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  new base A (147/172);  total (147/176)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 323 total aligned reads displayed.

GTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCT  >  CP042583/1646542‑1647101
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                     
gTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGTACCACGTACTGAGCGGAAGGAGAAATATTAAGCAGGGTCATGGCGGTTTCCACGGTGCCTAAAATTAAGATACCCGCCAACACATATGAGA‑TTTTTCCGATGCCCCCTTTCAGAGAAACCCCACCTAAACCGCAGGCGGAGATAACAATCAACTCATAAC‑AAATACACGGCAt                                                                                                                                                                                                                                                                                 >  2:1782131/1‑289 (MQ=255)
gTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCAt                                                                                                                                                                                                                                                                                 >  1:2127994/1‑289 (MQ=255)
 ttGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCAt                                                                                                                                                                                                                                                                                 <  1:1413355/288‑1 (MQ=255)
  tGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCAtt                                                                                                                                                                                                                                                                                <  1:1927663/288‑1 (MQ=255)
                aaaaaCGCTAAATTTTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGt                                                                                                                                                                                                                                                                  <  1:1667875/288‑1 (MQ=255)
                      gCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                           <  1:2223366/289‑2 (MQ=255)
                        tAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACgtg                                                                                                                                                                                                                                                          <  1:893929/288‑3 (MQ=255)
                           aTTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACgtgaagc                                                                                                                                                                                                                                                      <  1:173479/289‑7 (MQ=255)
                                          aGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCCGCCTAATTCCGGc                                                                                                                                                                                                                                       <  1:1529855/289‑1 (MQ=255)
                                             aTCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTa                                                                                                                                                                                                                                     <  1:2553863/288‑1 (MQ=255)
                                                 gACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCa                                                                                                                                                                                                                                                                >  1:431731/1‑257 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                           <  2:1739132/257‑2 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                            >  1:946716/1‑283 (MQ=255)
                                                      tGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                            >  2:205242/1‑283 (MQ=255)
                                                       gCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgatac                                                                                                                                                                                                                           <  2:1064786/288‑7 (MQ=255)
                                                       gCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                            <  1:1611347/287‑6 (MQ=255)
                                                       gCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgata                                                                                                                                                                                                                            <  1:205242/287‑6 (MQ=255)
                                                       gCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGct                                                                                                                                                                                                                                <  2:684212/283‑2 (MQ=255)
                                                           ttCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAgg                                                                                                                                                                                                                       >  1:1502061/1‑288 (MQ=255)
                                                              gCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAACCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGAGAAGCAAGAATAATTCCGGCTATCGCTGATACCAGGcctg                                                                                                                                                                                                                   >  2:2275485/1‑287 (MQ=255)
                                                                tttttGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGcctga                                                                                                                                                                                                                  <  2:2127994/288‑4 (MQ=255)
                                                                          tAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGa                                                                                                                                                                                                       >  1:2269850/1‑289 (MQ=255)
                                                                          tAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGa                                                                                                                                                                                                       >  1:1065215/1‑289 (MQ=255)
                                                                                tCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAAACAAGAaaataa                                                                                                                                                                                                 >  2:1447332/1‑289 (MQ=255)
                                                                                        cACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGt                                                                                                                                                                                          >  1:2020524/1‑288 (MQ=255)
                                                                                              tGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACACAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaaca                                                                                                                                                                                   >  1:2457024/1‑289 (MQ=255)
                                                                                                     agGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGct                                                                                                                                                                                                                                >  2:1810083/1‑236 (MQ=255)
                                                                                                       gATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGACTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGct                                                                                                                                                                                                                                <  2:2180133/235‑2 (MQ=255)
                                                                                                        aTTAAGCCGAGAACCACGTACTGCGAGAAAGGAGAAATAATAAGCAGGTTCAGGGCGTTTTCCAAGGGTCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTaca                                                                                                                                                                          <  2:2161547/288‑1 (MQ=255)
                                                                                                            aGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCg                                                                                                                                                                      >  1:793442/1‑288 (MQ=255)
                                                                                                            aGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGAACCCAGGACTGAAAGAACAAAGATAATAATTTTGGTTCGAAAAAACGGTaaccctgt                                                                                                                                                                     >  2:1033723/1‑282 (MQ=255)
                                                                                                                 cgAACCACGTACTGCGCGAAAGGAGATATATTAAGCAGGGTCATGGCTTTTTCCACGGTGCCTAAAATTAATATACCCGCCACCACATATGAGA‑TTTTTCAGATGCCACCTTTCAGAGAAACGCCGCCTAACACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGGCATTGGCTGCCCACTGGTCATACGTGCAGCCAGAATAATTCCGGCTAACGCTGCTACCAGCACTGAGAGCACCAAAATAATAATCTTGGTCCGTACAACCAGTACACCCGCCAgc                                                                                                                                                                 >  2:1576076/1‑287 (MQ=255)
                                                                                                                         gTACTGCTGGGAAGGAGAAATATTAAGCAGGTTCATGGCTTGTTCCACGGTTCCTAAAATTAAGAAACCCGCCACCACATATGCGA‑TTTTTCAGATGCCACCTAACAGAGAAACGCCACCTAAAACGCAGGCGGAGATAAAAATCAGCTCATAAT‑CAAGCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTa                                                                                                                                                                            <  2:305964/269‑1 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAAtt                                                                                                                                                                                                                                            >  1:2174398/1‑199 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCt                                                                                                                                                                                                                                      <  1:927328/205‑1 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACa                                                                                                                                                                                                           >  2:2664685/1‑232 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCg                                                                                                                                                  >  2:928218/1‑289 (MQ=255)
                                                                                                                               cgcgAAAGGAGAAATATTAAGCAGGTTCATGGCGCTTTCAACGGAGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCTGAGATAACAATCAGCTCATAAC‑CAATCGACGACATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCAGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACAGGTACACCAGCCAGACGCGGGGCATCTTCg                                                                                                                                                  >  2:1282300/1‑289 (MQ=255)
                                                                                                                                gcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGATTTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCAt                                                                                                                                                                                                                                                                                 <  2:2016711/162‑1 (MQ=255)
                                                                                                                                gcgAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCa                                                                                                                                                                                                                                                                >  2:633356/1‑178 (MQ=255)
                                                                                                                                   aacggAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCAGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCACATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACACAGATAATAATTTTGGTGCGAACAACCGGTACAccagccag                                                                                                                                                                  >  1:305964/4‑269 (MQ=255)
                                                                                                                                   aaaGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGctgatacc                                                                                                                                                                                                                          >  2:393327/1‑206 (MQ=255)
                                                                                                                                         gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCgg                                                                                                                                                                              >  2:77213/1‑251 (MQ=255)
                                                                                                                                         gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCgg                                                                                                                                                                              <  1:77213/251‑1 (MQ=255)
                                                                                                                                         gaAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCaa                                                                                                                                        >  2:1517977/1‑289 (MQ=255)
                                                                                                                                               ttAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCa                                                                                                                                  <  1:2161620/289‑1 (MQ=255)
                                                                                                                                                tAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                 <  1:2354146/289‑1 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                    >  2:480834/1‑237 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                <  2:2563692/289‑1 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                <  2:868607/289‑1 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCCACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                    >  2:610663/1‑237 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCCACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGaac                                                                                                                                                                                    <  1:610663/237‑1 (MQ=255)
                                                                                                                                                 aaGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCACCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAgg                                                                                                                                <  2:1126501/289‑1 (MQ=255)
                                                                                                                                                       gTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGAGACCAGGCCTGAGAGAACAAAGAGAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCGCTTAGATCCCGCCAATCGCAACGgtgta                                                                                                                           >  1:354898/1‑287 (MQ=255)
                                                                                                                                                       gTTCAGGGCGTTTTCCACGGTGACTAAAATTAAGATACCCGCCACCCCATATGAGA‑TGTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGtt                                                                                                                           <  2:195725/288‑1 (MQ=255)
                                                                                                                                                            tgactgttgcaaCGGTCCCTAAAATAAAAATACCGGCCACCACATATGGGA‑TTTTTCCAATGCCCACTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATACC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGAcc                                                                                                                     <  2:2386578/278‑1 (MQ=255)
                                                                                                                                                                 ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGAcgcg                                                                                                                                                             <  1:1592402/244‑1 (MQ=255)
                                                                                                                                                                 ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                 <  2:816782/272‑1 (MQ=255)
                                                                                                                                                                 ttttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGGTCCCGCCAATCGCCAGGGGGTTCATACCAAAgg                                                                                                                >  2:27019/1‑289 (MQ=255)
                                                                                                                                                                   ttCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCa                                                                                                                                                                                                                                                                       <  1:1789373/136‑1 (MQ=255)
                                                                                                                                                                    tCCACGGTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAggtgg                                                                                                             <  2:275847/289‑1 (MQ=255)
                                                                                                                                                                    tCCACGGTGCCTAAAATTAAGATACCCGCAACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACACAGATAATAATTTTGGTGCGAACAACCGGTCCACCCGCCAGACGCCAGGCCTCTTCGTTCCCGCCAATCGCCAGGCTCTTACGAACAAAggtgg                                                                                                             >  1:1036343/1‑289 (MQ=255)
                                                                                                                                                                         ggTGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTa                                                                                                        >  1:388466/1‑289 (MQ=255)
                                                                                                                                                                           tGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCt                                                                                                                                                                                                                                      <  1:2392146/161‑1 (MQ=255)
                                                                                                                                                                           tGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGcctg                                                                                                                                                                                                                   <  1:1336385/180‑3 (MQ=255)
                                                                                                                                                                           tGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGcctg                                                                                                                                                                                                                   >  2:1336385/1‑178 (MQ=255)
                                                                                                                                                                           tGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTAt                                                                                                       >  2:519755/1‑288 (MQ=255)
                                                                                                                                                                           tGCCTAAAATTAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATA‑CAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                 <  1:552974/261‑1 (MQ=255)
                                                                                                                                                                                     tAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCa                                                                                                                                                                                                                                                                <  1:2655454/125‑1 (MQ=255)
                                                                                                                                                                                     tAAGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGat                                                                                                                                                                                                      <  2:2434875/183‑1 (MQ=255)
                                                                                                                                                                                       aGATACCCGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGGTTTATTCAGCAGCAAAcc                                                                                          >  1:2724731/1‑289 (MQ=255)
                                                                                                                                                                                              cGCCACCACATATGAGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGCAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACa                                                                                                                                                                                                           <  2:554926/169‑1 (MQ=255)
                                                                                                                                                                                                             gA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTCTTTAGCAGCAAACCAAAGATAATCACACACGCCACg                                                                    >  2:2601695/1‑289 (MQ=255)
                                                                                                                                                                                                              a‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTTCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTTGTGCGAACAACCGGTACACCCGCCAGACGCCCGCCCTCTTCGTTCCCGCCAATCGCCAGGGTGTGAAGACCAAAGTTGGGTTTATTCAACCGCAAACAAACGATAACCAGAAACACAACgg                                                                   >  2:1252173/1‑289 (MQ=255)
                                                                                                                                                                                                                                  tCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCgcagg                                                <  1:1008827/289‑1 (MQ=255)
                                                                                                                                                                                                                                        aaaCGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAAc                                                                                           <  1:1248380/240‑1 (MQ=255)
                                                                                                                                                                                                                                         aaCGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCg                                         >  2:550109/1‑289 (MQ=255)
                                                                                                                                                                                                                                           cGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACgt                                                                                                                                                                                                                                                           <  1:687207/77‑2 (MQ=255)
                                                                                                                                                                                                                                           cGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCaa                                                                                                                                        <  2:2086502/192‑1 (MQ=255)
                                                                                                                                                                                                                                           cGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCagcagc                                                                                               >  1:120093/1‑233 (MQ=255)
                                                                                                                                                                                                                                                     aaCGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                             <  2:1854752/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     aaCGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                             <  1:2601695/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     aaCGCAGGACGAGATAAACATACGGACAGAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGGCTGGGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCg                             <  2:2393502/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         cAGGCGGGAATAACAATCACCTCAAAACACAGCGC‑AGTCATTGGCTGACCACTGGTCATACGAGAAGCAAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCATGCAGACCGAACCAGTTGGCg                             <  2:1202965/285‑1 (MQ=255)
                                                                                                                                                                                                                                                          aGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAg                                                                                                                                 >  1:1812790/1‑184 (MQ=255)
                                                                                                                                                                                                                                                          aGGCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCATGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAAcc                        >  1:1756960/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           ggCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCgg                                                                                                                                                          >  2:1093011/1‑158 (MQ=255)
                                                                                                                                                                                                                                                           ggCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCgg                                                                                                                                                          <  1:1093011/158‑1 (MQ=255)
                                                                                                                                                                                                                                                           ggCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGAt                                                         <  1:581349/255‑1 (MQ=255)
                                                                                                                                                                                                                                                           ggCGGAGATAACAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGAt                                                         >  2:581349/1‑255 (MQ=255)
                                                                                                                                                                                                                                                                      cAATCAGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAaagaa            >  2:1619169/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           aGCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCtt        >  2:1682160/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                            gCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGGAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc      >  1:663419/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                            gCTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGCAACCAAGGGCAAAGGAGCctt       >  2:18819/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             cTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCTCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCa     >  1:2498036/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cTCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCCGGCAGACCGAACCAGTTGGCGTAACCCAGGGCAAAGAACCTATCa     >  2:2475073/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              tCATAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc      <  1:1124884/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                              tCATAAC‑AAATCGACTTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc      <  2:175946/287‑1 (MQ=255)
                                                                                                                                                                                                                                                                              ccATAAC‑CATTCGACGACATTGGCTGCCCACGGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTc      <  2:2724731/286‑1 (MQ=255)
                                                                                                                                                                                                                                                                                aTAAC‑CAATCGACGTCATTGGCTGCCCACTGGTCATACGTGAAGCCAGAATAATTCCGGCTATCGCTGATACCAGGCCTGAGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCt  <  1:1976698/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                          |||                                                                                                                                                                                                                                                                                     
GTTGGCTATGGTGGGAAAAAACGCTAAATTGTTGCAGAAAAAAGCATCAGACAGTGCGTTTCGCTTTTTGCTTGTAACGGTCGAAGATCACCGCTGCCAGCAGGATTAAGCCGCGAACCACGTACTGCGCGAAAGGAGAAATATTAAGCAGGTTCATGGCGTTTTCCACGGTGCCTAAAATTAAGATACCCGCCACCACATAACTGA‑TTTTTCCGATGCCACCTTTCAGAGAAACGCCACCTAAAACGCAGGCGGAGATAACAATCAGCTCATAAC‑CAATGCTCGTCATTGGCTGCCCACTGGTCATACGACTAGCCAGAATAATTCCGGCTATCGCACTTACCAGGCCACTGAGAACAAAGATAATAATTTTGGTGCGAACAACCGGTACACCCGCCAGACGCGCGGCCTCTTCGTTCCCGCCAATCGCCAGGGTGTTACGACCAAAGGTGGTTTTATTCAGCAGCAAACCAAAGATAATCAGACACGCGACGGTGAGCCAGATTGGCGCAGGCAGACCGAACCAGTTGGCGTAACCAAGGGCAAAGAAGCTTTCATCT  >  CP042583/1646542‑1647101

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A