Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A5 F210 I1 R1 4929 268.4 3907572 96.3% 3762991 273.2

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,664,306 3 bp→CGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,664,3060GC99.6% 570.6 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (0/1);  new base C (114/128);  total (114/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,664,3070CG99.6% 568.4 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (114/128);  minor base A (0/1);  total (114/129)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,664,3080TA99.2% 566.4 / NA 243intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (114/127);  minor base G (0/2);  total (114/129)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.93e-01

Only 100 of 243 total aligned reads displayed.

CTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAAGCTGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCAAAAATATT  >  CP042583/1664026‑1664587
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
cTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGAGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTg                                                                                                                                                                                                                                                                                    <  1:838394/289‑1 (MQ=255)
  ggCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCa                                                                                                                                                                                                                                                                                  <  1:549709/289‑1 (MQ=255)
  cgCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCa                                                                                                                                                                                                                                                                                  <  1:1118193/288‑1 (MQ=255)
   gCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCa                                                                                                                                                                                                                                                                                  <  2:166733/288‑1 (MQ=255)
           acccaAAACTCCTCACCACCGACACGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGAATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAacataca                                                                                                                                                                                                                                                                         <  2:1421339/286‑1 (MQ=255)
                 aaCTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAGAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTTCAACGACCTTTGCAGAACATACATGTTga                                                                                                                                                                                                                                                                   >  2:364247/1‑288 (MQ=255)
                       tcACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCa                                                                                                                                                                                                                                                            >  2:1672156/1‑289 (MQ=255)
                           caccGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCg                                                                                                                                                                                                                                                        >  1:1676955/1‑289 (MQ=255)
                                aCCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAACTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGACTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGCCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGTACCTACAGGTTGCTA‑ACCATCCgggcaa                                                                                                                                                                                                                                                   >  2:641275/1‑285 (MQ=255)
                                 cccgcccgGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAAt                                                                                                                                                                                                                                                  <  2:336559/289‑1 (MQ=255)
                                     cccgGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATcaca                                                                                                                                                                                                                                              >  2:744002/1‑289 (MQ=255)
                                     cccgGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCACCCCGCCaacccat                                                                                                                                                                                                                                              >  2:1187135/1‑284 (MQ=255)
                                            aCGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAgg                                                                                                                                                                                                                                       <  1:212610/289‑1 (MQ=255)
                                              gTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGgag                                                                                                                                                                                                                                     <  2:268214/289‑1 (MQ=255)
                                               tCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGGACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGgaga                                                                                                                                                                                                                                    >  1:1701291/1‑289 (MQ=255)
                                                ccTCCGCAAGGAAGGAAATGCTAATTAATCCGGGAGCAAGAGAAAGAACACGGTAGCCCGCCTGATGCCCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGAt                                                                                                                                                                                                                                   <  2:1153372/289‑1 (MQ=255)
                                                       acgcaAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTaa                                                                                                                                                                                                                             <  1:1418993/288‑1 (MQ=255)
                                                        cgcaAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           <  1:977481/289‑1 (MQ=255)
                                                        cgcaAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           <  1:769567/289‑1 (MQ=255)
                                                        agaaaGGAACTGCTAATTAATCCGGCAGCATGGGAAAGAACACGGTCGCCCGGCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAAGGACAGAAAAAGGATGTTGGGGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           <  2:1125430/286‑1 (MQ=255)
                                                               aaCTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTGATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACAtggtg                                                                                                                                                                                                                      <  2:1273529/287‑1 (MQ=255)
                                                                   gCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAag                                                                                                                                                                                                                >  2:407381/1‑289 (MQ=255)
                                                                   gCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAag                                                                                                                                                                                                                >  1:798564/1‑289 (MQ=255)
                                                                   gCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAag                                                                                                                                                                                                                >  1:938201/1‑289 (MQ=255)
                                                                       attaatCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAgc                                                                                                                                                                                                             >  1:120694/1‑288 (MQ=255)
                                                                         taatCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTACAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           >  1:519855/1‑272 (MQ=255)
                                                                         taatCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTACAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           <  2:519855/272‑1 (MQ=255)
                                                                            tCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACCTACCAGGAGACGAGTAACATGGTGGTAAAGAGCGCCcac                                                                                                                                                                                                       >  2:968925/1‑289 (MQ=255)
                                                                              cGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCcaca                                                                                                                                                                                                      >  1:627306/1‑288 (MQ=255)
                                                                               ggCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCAcagc                                                                                                                                                                                                    <  1:485361/289‑1 (MQ=255)
                                                                                  agaaagagagagaACACAGGAGCGCGCCTGAGGACCAAAGCAGTCATTAATCGCTTTAAAATGGTAAAGATCGAGCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATGTTGCGAGCGGACGGGCTTGTTCGAACAGTGCGCCACGGTTAGATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCAcagc                                                                                                                                                                                                    <  2:629038/281‑1 (MQ=255)
                                                                                     aTGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGt                                                                                                                                                                                               <  2:294501/288‑1 (MQ=255)
                                                                                      tGAGAAAGAACACGGTTGCCACCCTGATGACCAAAGCGGTAATTAATCGCTTTAAAATGGTCAAGAGCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTa                                                                                                                                                                                             <  2:1280353/289‑1 (MQ=255)
                                                                                          aaaagacacGGGCGCCCATCTGATGACCAAAGCGGTCATTAATCGATTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGGGCGTCTGACCCAATTTAGCGAGCGGACGTGGTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTaatgc                                                                                                                                                                                         <  2:1391246/284‑1 (MQ=255)
                                                                                           aagaaCACGGTGACCAGCCTGATGACATAAGCGGTCATGAATCGCTTTAAAATGGTCAAGATCTACCTGAAGGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCAACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCAACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTaatgc                                                                                                                                                                                         <  2:1061942/288‑1 (MQ=255)
                                                                                           aagaaCACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTaatgc                                                                                                                                                                                         <  2:479892/288‑1 (MQ=255)
                                                                                              aaCACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           >  2:716616/1‑251 (MQ=255)
                                                                                                        cccgccTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCAcagc                                                                                                                                                                                                    >  1:406203/1‑264 (MQ=255)
                                                                                                        cccgccTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTa                                                                                                                                                                                             >  1:500437/1‑271 (MQ=255)
                                                                                                        cccgccTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACta                                                                                                                                                                            >  1:1087481/1‑287 (MQ=255)
                                                                                                        cccgccTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAAGCAATGAGGAACATGGTGGTAAAGAGCGCCCAAAGCAGGGTTAATGACATGCCGCTACtt                                                                                                                                                                            >  2:140181/1‑287 (MQ=255)
                                                                                                          cgccTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCg                                                                                                                                                                         >  1:842378/1‑289 (MQ=255)
                                                                                                                   aCCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATcgcc                                                                                                                                                                 >  1:1179489/1‑288 (MQ=255)
                                                                                                                             tCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCGACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCt                                                                                                                                                       >  1:569193/1‑288 (MQ=255)
                                                                                                                             tCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGcacaaccct                                                                                                                                                       >  2:843769/1‑283 (MQ=255)
                                                                                                                                 tAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCt                                                                                                                                                  <  1:1392274/289‑1 (MQ=255)
                                                                                                                                           aaaaTGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGACGCGAACGCCTTCGCTTAACGTAttg                                                                                                                                        >  1:204359/1‑287 (MQ=255)
                                                                                                                                                ggTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACg                                                                                                                                   <  1:1638488/289‑1 (MQ=255)
                                                                                                                                                  tCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTTCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCt                                                                                                                                                  >  1:257776/1‑272 (MQ=255)
                                                                                                                                                  tCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTTCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCt                                                                                                                                                  <  2:257776/272‑1 (MQ=255)
                                                                                                                                                           aCCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           >  2:5113/1‑190 (MQ=255)
                                                                                                                                                           aCCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACa                                                                                                                                                                                                                           <  1:5113/190‑1 (MQ=255)
                                                                                                                                                           aCCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCt                                                                                                                                                  >  2:806849/1‑263 (MQ=255)
                                                                                                                                                           aCCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGcaca                                                                                                                         >  1:1005049/1‑288 (MQ=255)
                                                                                                                                                                            aGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGa                                                                                                       <  1:1323463/289‑1 (MQ=255)
                                                                                                                                                                                 gTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTc                                                                                                  <  1:1627143/289‑1 (MQ=255)
                                                                                                                                                                                 gTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTc                                                                                                  <  2:938201/289‑1 (MQ=255)
                                                                                                                                                                                  gtggttatgcTGACACAATTTAGCTGCCGGACGGTCTTTTTCGAACAGTGCGCCACGGTTATATGAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTc                                                                                                  <  1:896501/279‑1 (MQ=255)
                                                                                                                                                                                       gCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCt                                                                                            <  1:295201/289‑1 (MQ=255)
                                                                                                                                                                                         gTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGgag                                                                                                                                                                                                                                     >  2:599965/1‑150 (MQ=255)
                                                                                                                                                                                         gTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGgag                                                                                                                                                                                                                                     <  1:599965/150‑1 (MQ=255)
                                                                                                                                                                                          tCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAAc                                                                                         >  1:1248154/1‑289 (MQ=255)
                                                                                                                                                                                                 caATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGa                                                                                  <  1:67897/289‑1 (MQ=255)
                                                                                                                                                                                                    tttAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCg                                                                                   >  1:453377/1‑285 (MQ=255)
                                                                                                                                                                                                      tAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCGACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTc                                                                             <  2:569193/289‑1 (MQ=255)
                                                                                                                                                                                                          gagcgGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCAt                                                                          >  2:540756/1‑288 (MQ=255)
                                                                                                                                                                                                                aagcgCTTTTTCGAACAGTGAGCAAAGGTTATATATACGCGTTGAGGTGTCGTGCCACGCCTGCAACTGCAAGGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGGTAATGCAATGCTGATACTGCCGAAATCGACGCGCACGCCGTCGCGTAACGTATGGACACGCACCAGCACACCGTCGaaa                                                                                                                <  1:410461/240‑1 (MQ=255)
                                                                                                                                                                                                                     gtttttCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGGGTCGGGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATgccgc                                                               <  2:1628527/287‑1 (MQ=255)
                                                                                                                                                                                                                         ttCGAAACGTGCGCCAGGGTTAGATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACGGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCcgc                                                          <  2:1747524/289‑1 (MQ=255)
                                                                                                                                                                                                                              aCAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCTTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTc                                                     <  2:773603/289‑1 (MQ=255)
                                                                                                                                                                                                                              aCAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAg                                                                                              <  1:740120/248‑1 (MQ=255)
                                                                                                                                                                                                                                  tGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCAcag                                                                                                                                                                                                     >  2:1780152/1‑141 (MQ=255)
                                                                                                                                                                                                                                  tGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCAcag                                                                                                                                                                                                     <  1:1780152/141‑1 (MQ=255)
                                                                                                                                                                                                                                  tGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGaaa                                                                                                                >  2:489100/1‑226 (MQ=255)
                                                                                                                                                                                                                                  tGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCAt                                                   >  1:382235/1‑287 (MQ=255)
                                                                                                                                                                                                                                  tGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGt                                                 >  2:383168/1‑289 (MQ=255)
                                                                                                                                                                                                                                    cgcCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGaca                                                                                                                                     <  2:1831227/203‑1 (MQ=255)
                                                                                                                                                                                                                                    cgcCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGaca                                                                                                                                     >  1:1831227/1‑203 (MQ=255)
                                                                                                                                                                                                                                       cACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCa                                             <  1:1311829/288‑1 (MQ=255)
                                                                                                                                                                                                                                          ggTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGc                                         <  2:147731/289‑1 (MQ=255)
                                                                                                                                                                                                                                           gctatataAGCGCGTTAAGTGGTCGTGCCACTCCGGCCCCTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGc                                         <  2:1424936/286‑1 (MQ=255)
                                                                                                                                                                                                                                            ttATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAACGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTg                                          >  1:1424936/1‑286 (MQ=255)
                                                                                                                                                                                                                                               tataAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTgcg                                    <  1:473660/289‑1 (MQ=255)
                                                                                                                                                                                                                                                 taaaagagtagaGGCGTCGTGCCACGCCAGACACTGCAACGAGCGTAGAAGAACATACGTGTTGATACACCA‑CCGGTGAGTCACATGTCGAGAGATTAGTAACCAGGTGGGAAAGAGCGGCAACAGCAGGGTGAATGCAGGGCTGATACTACAGAAATCGCCGGGCAGGCCTGAGCTTAACGTCTGGCCACGCAACAGCACACCGTCGAAATGGTCCAGGCGTTCCCAGCTAACATAGCGACTGTCCATACGGATGCCGCCCCGCGTGTCATGTTCCATTGCCTgcg                                    <  2:1055366/276‑1 (MQ=255)
                                                                                                                                                                                                                                                    aCGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAg                                >  2:757809/1‑288 (MQ=255)
                                                                                                                                                                                                                                                    aCGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGc                               >  1:1672605/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     cgcgTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCa                              >  1:518541/1‑289 (MQ=255)
                                                                                                                                                                                                                                                      gcgTTAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATTGTCCATGCCCTGCGCCAGCac                             >  2:21026/1‑288 (MQ=255)
                                                                                                                                                                                                                                                          tAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGc                          <  2:1565076/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tAAGGTGTCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCAGCCGGCGAATCACAGACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGc                          <  1:1044252/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                 tCGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCGTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATACCGACCGTCCATACGAATGCCGCCCCCCTTGTCATGTTCCTTTTCCTGCGCCCGcccgtccgttgccc                  >  2:1878025/1‑276 (MQ=255)
                                                                                                                                                                                                                                                                  cGTGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACg                 <  1:1632809/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                    tGCCACGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAg               >  1:1760168/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         cGCCTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCa          >  1:697879/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCt                                                                                            >  2:876294/1‑205 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCt                                                                                            <  1:876294/205‑1 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCaaa        >  1:1477069/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                           ccTGCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCaaa        >  1:966890/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              gCCACTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTAt                                                                                                                                          >  1:1723225/1‑156 (MQ=255)
                                                                                                                                                                                                                                                                                 aCTGCAACGAGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCAAAAATAtt  <  1:1523030/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                        
CTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATGACCAAAGCGGTCATTAATCGCTTTAAAATGGTCAAGATCGACCTGAATGACAGAAAAAGGATGTTGGTGCGTCTGACACAATTTAGCGAGCGGACGGGCTTTTTCGAACAGTGCGCCACGGTTATATAAACGCGTTAAGGTGTCGTGCCACGCCTGCCACTGCAAGCTGCTTTGCAGAACATACATGTTGCTA‑ACCATCCGGCGAATCACATACCAGGAGATGAGTAACATGGTGGTAAAGAGCGCCCACAGCAGGGTTAATGCAATGCTGATACTGCCGAAATCGCCGCGCACGCCTTCGCTTAACGTATGGACACGCACCAGCACACCGTCGAAATGGTCCAGACGTTCCCAGCTAACATAGCGACTGTCCATACGAATGCCGCCCCGCGTGTCATGTTCCATTGCCTGCGCCAGCAAGGCCAGTTCACGAGGATCAAAAATATT  >  CP042583/1664026‑1664587

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A