Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,493,440 3 bp→TCA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,493,4400AT99.5% 876.2 / ‑1.7 367intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/1);  major base T (181/182);  minor base . (1/1);  total (183/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.39e-01
*CP0425831,493,4410GC99.5% 868.8 / NA 367intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base G (1/1);  new base C (181/182);  total (183/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,493,4420TA99.2% 866.8 / ‑0.7 367intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/1);  major base A (182/181);  minor base C (1/2);  total (183/184)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 367 total aligned reads displayed.

GCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGAGTATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGTGCA  >  CP042583/1493161‑1493717
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
   cGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCg                                                                                                                                                                                                                                                                           <  2:1233495/289‑1 (MQ=255)
                cATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTg                                                                                                                                                                                                                                                               >  1:566075/1‑288 (MQ=255)
                  tctcAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCg                                                                                                                                                                                                                                                            <  1:1963756/289‑1 (MQ=255)
                   ctcAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGc                                                                                                                                                                                                                                                           >  1:681357/1‑289 (MQ=255)
                   ctcAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGc                                                                                                                                                                                                                                                           >  1:1479615/1‑289 (MQ=255)
                         tAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTc                                                                                                                                                                                                                                                       <  1:275419/287‑1 (MQ=255)
                           ggCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTg                                                                                                                                                                                                                                                               <  2:1410885/277‑1 (MQ=255)
                           ggCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCg                                                                                                                                                                                                                                                   >  2:1981872/1‑289 (MQ=255)
                                      ttttCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACACCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTc                                                                                                                                                                                                                                                       <  1:302843/274‑1 (MQ=255)
                                            tgccATTGTTATGCTTTTGTTTACCCCGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGGTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGaaa                                                                                                                                                                                                                                  <  2:2221787/287‑1 (MQ=255)
                                            gACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGaaa                                                                                                                                                                                                                                  <  2:1338939/289‑1 (MQ=255)
                                            gACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGaaa                                                                                                                                                                                                                                  <  1:311723/289‑1 (MQ=255)
                                                aTCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAActgc                                                                                                                                                                                                                              >  1:2554256/1‑289 (MQ=255)
                                                aTCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAAct                                                                                                                                                                                                                                >  1:1706082/1‑287 (MQ=255)
                                                         cTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGgatg                                                                                                                                                                                                                     <  1:1378103/289‑1 (MQ=255)
                                                           tttGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGgatgat                                                                                                                                                                                                                   <  2:1902041/289‑1 (MQ=255)
                                                            ttGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCa                                                                                                                                                                                                                                                          >  1:2511268/1‑249 (MQ=255)
                                                            ttGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGgatgat                                                                                                                                                                                                                   >  2:2710017/1‑288 (MQ=255)
                                                                      cGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCt                                                                                                                                                                                                                                                     <  1:2597194/244‑1 (MQ=255)
                                                                                   gatGGTCGGTGGGCTAGTCACCAACCTGTTTGGTTTGACGGCTGCAGGTCTGGTTCAGGGTGGTGCAGGAACTGCACGTCTGAAAGTCATTGAAAGTACCTATGTTGGTAAAGTCTCTGATCTGCGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAGCCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCtt                                                                                                                                                                                            <  2:685144/286‑1 (MQ=255)
                                                                                        tctggtggCTGGGCGCCAACCTGTTTGGGTTGGCGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCg                                                                                                                                                                                       <  2:1782631/281‑1 (MQ=255)
                                                                                        tCGGTGTGCAGATCACCAACCTGTTTGGTTTGCCGGTTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTTTCCTTTATCCCGAAAAACCCGTTTGACGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCg                                                                                                                                                                                       <  2:1711411/288‑1 (MQ=255)
                                                                                         cGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAGGGTGAACGCGTCTTAGCCGc                                                                                                                                                                                      <  1:406460/288‑1 (MQ=255)
                                                                                            tgtgCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGaa                                                                                                                                                                                                    >  1:482379/1‑271 (MQ=255)
                                                                                            tgtgCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGaa                                                                                                                                                                                                    <  2:482379/271‑1 (MQ=255)
                                                                                                 tGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATa                                                                                                                                                                              <  1:930372/288‑1 (MQ=255)
                                                                                                 tGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATa                                                                                                                                                                              <  2:1479615/288‑1 (MQ=255)
                                                                                                   gTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATa                                                                                                                                                                              <  2:2569368/286‑1 (MQ=255)
                                                                                                     cACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGACTTAGCCGCTATCGATACCCTa                                                                                                                                                                         <  1:32703/289‑1 (MQ=255)
                                                                                                      aCCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAg                                                                                                                                                                                                                                             >  1:238391/1‑220 (MQ=255)
                                                                                                      aCCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAg                                                                                                                                                                                                                                             <  2:238391/220‑1 (MQ=255)
                                                                                                               tttggtttgACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCTGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAAAGCGTCTTAGCCCTTATCGAAACCCTAAAAACCTtgg                                                                                                                                                               >  2:1805952/1‑289 (MQ=255)
                                                                                                                      tgACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAGGTAACTATGTTGGTAAAGTCTCTGATCTGATCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGCTGaa                                                                                                                                                        >  2:1641281/1‑289 (MQ=255)
                                                                                                                        aCGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCACGTAAAACCAGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCCTTCCTCGGCGTAGCTGCATTGAAACTGACGAAGGATGATGCGCCGAAAGGTGAAGGCGTCTTAGCCGCTATCGAGACCTAACAATGCTGGGTGATGAAAc                                                                                                                                                      >  2:323262/1‑289 (MQ=255)
                                                                                                                                aGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCg                                                                                                                                               <  2:1509910/288‑1 (MQ=255)
                                                                                                                                      ggTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGaaa                                                                                                                                                       >  2:64512/1‑274 (MQ=255)
                                                                                                                                         tCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATg                                                                                                                                     <  1:442941/289‑1 (MQ=255)
                                                                                                                                                 gtgCGGAAATTGCACGTTTGAAAGCCATTGAAAGTAACTATGTTTGTAAAGTATCTGATCTGTGCTTTCCGCAGCTGGTATTGTCCTTTATCCCAAAAAACCCGTTTTCCGATATTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTTCCGAATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGa                                                                                                                              <  2:2603204/288‑1 (MQ=255)
                                                                                                                                                 gtgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGaa                                                                                                                                                                                                           >  1:2455856/1‑211 (MQ=255)
                                                                                                                                                 gtgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGaa                                                                                                                                                                                                           <  2:2455856/211‑1 (MQ=255)
                                                                                                                                                 gtgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGa                                                                                                                              >  2:2971399/1‑288 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCg                                                                                                                                                                                 <  1:973320/236‑1 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCg                                                                                                                                                                                 >  2:973320/1‑236 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATa                                                                                                                                                                              <  2:423173/239‑1 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGcc                                                                                                                                             >  1:1417361/1‑272 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGAc                                                                                                                             >  1:797005/1‑288 (MQ=255)
                                                                                                                                                  tgCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGAc                                                                                                                             >  1:2668167/1‑288 (MQ=255)
                                                                                                                                                       aaaCTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGaa                                                                                                                                                                                                    >  1:1733343/1‑212 (MQ=255)
                                                                                                                                                       aaaCTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGaa                                                                                                                                                        <  1:2157383/256‑1 (MQ=255)
                                                                                                                                                         aCTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAACGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACg                                                                                                                     >  2:2874875/1‑289 (MQ=255)
                                                                                                                                                              aCGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATa                                                                                                                                                                              <  1:2895468/227‑1 (MQ=255)
                                                                                                                                                               cGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTc                                                                                                               <  1:2616842/289‑1 (MQ=255)
                                                                                                                                                                  cTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTTGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTgg                                                                                                            <  1:2521261/289‑1 (MQ=255)
                                                                                                                                                                          cATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAg                                                                                                                                                                                                                                             >  2:3066393/1‑152 (MQ=255)
                                                                                                                                                                          cATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAg                                                                                                                                                                                                                                             <  1:3066393/152‑1 (MQ=255)
                                                                                                                                                                                    aaCTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGc                                                                                                                                                                                                                                            >  1:1784498/1‑143 (MQ=255)
                                                                                                                                                                                    aaCTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTgg                                                                                          >  2:1069500/1‑289 (MQ=255)
                                                                                                                                                                                        aTGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGc                                                                                      <  1:2974370/289‑1 (MQ=255)
                                                                                                                                                                                         tGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTgg                                                                                                                                          <  2:1047831/236‑1 (MQ=255)
                                                                                                                                                                                         tGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGAcccc                                                                                                                          <  1:745219/252‑1 (MQ=255)
                                                                                                                                                                                         tGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGAcccc                                                                                                                          >  2:745219/1‑252 (MQ=255)
                                                                                                                                                                                              gTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGcc                                                                                                                                             >  1:1311490/1‑228 (MQ=255)
                                                                                                                                                                                                   gTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGa                                                                                                                                                                                <  1:135933/188‑1 (MQ=255)
                                                                                                                                                                                                   gTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGcc                                                                                                                                             <  2:91084/223‑1 (MQ=255)
                                                                                                                                                                                                     ctctGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAACGTGGTTGCAGGTTCTAACtt                                                                          >  2:615366/1‑288 (MQ=255)
                                                                                                                                                                                                      tctgatctgaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGTAATACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGGGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGCAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGc                                                                        <  1:2107848/289‑1 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCg                                                                                                                                                                                       <  1:1611626/170‑1 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCg                                                                                                                                                                                       >  2:1611626/1‑170 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTgg                                                                                                                                                   >  2:2529493/1‑206 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGa                                                                                                                              >  1:1520747/1‑227 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGa                                                                                                                              <  2:1520747/227‑1 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACg                                                                                                                     <  2:856565/236‑1 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACg                                                                                                                     >  1:856565/1‑236 (MQ=255)
                                                                                                                                                                                                              gaGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAGGTGGTCGCAGGTTCTAACTTGCAAGAcacc                                                                >  2:1570250/1‑287 (MQ=255)
                                                                                                                                                                                                                       gCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTg                                                       >  2:2925620/1‑289 (MQ=255)
                                                                                                                                                                                                                         aGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTggg                                                     >  2:2140053/1‑289 (MQ=255)
                                                                                                                                                                                                                            tGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTggg                                                     <  2:566075/286‑1 (MQ=255)
                                                                                                                                                                                                                                   gTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGACGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGGAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTa                                                                              >  2:1306551/1‑254 (MQ=255)
                                                                                                                                                                                                                                    tCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTCACTTGCAAGAAACCATCAAAATGGGAAGTTTCGttt                                          >  2:2122807/1‑288 (MQ=255)
                                                                                                                                                                                                                                      cTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTc                                        <  2:2005222/289‑1 (MQ=255)
                                                                                                                                                                                                                                      cTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTc                                        <  1:2013752/289‑1 (MQ=255)
                                                                                                                                                                                                                                         tATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTa                                                                                                                                                                         <  1:1991504/157‑1 (MQ=255)
                                                                                                                                                                                                                                         tATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTcgcg                                     >  1:1562737/1‑289 (MQ=255)
                                                                                                                                                                                                                                         tATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTcgcg                                     >  1:809625/1‑289 (MQ=255)
                                                                                                                                                                                                                                              cGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTc                                                                                <  1:1005640/241‑1 (MQ=255)
                                                                                                                                                                                                                                                aaaaaCCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTg                                                                                                                                                                                                                                                               <  2:2339093/64‑1 (MQ=255)
                                                                                                                                                                                                                                                aaaaaCCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGt                                                                                                                                                  >  1:1044058/1‑173 (MQ=255)
                                                                                                                                                                                                                                                aaaaaCCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTAc                               >  1:1123823/1‑288 (MQ=255)
                                                                                                                                                                                                                                                   aaCCCGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCg                           <  2:809625/289‑1 (MQ=255)
                                                                                                                                                                                                                                                     cccGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGa                                                                    <  1:2062069/246‑1 (MQ=255)
                                                                                                                                                                                                                                                     cccGTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGa                                                                    >  2:2062069/1‑246 (MQ=255)
                                                                                                                                                                                                                                                      cctgttGCCGATCTTACCCGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTc                        <  2:797005/285‑1 (MQ=255)
                                                                                                                                                                                                                                                        gTTTGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCTTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTctg                      <  1:644741/289‑1 (MQ=255)
                                                                                                                                                                                                                                                         tttGCCGATCTTACCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTctgc                     <  2:2514838/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aCCGGATCCAATCCGACGTCCATTATCCGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTTGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTg         <  1:1270597/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aCCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGaa                                                                                                                                                                                                    <  1:1832517/102‑1 (MQ=255)
                                                                                                                                                                                                                                                                     aCCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGttt          >  1:1644089/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     aCCGGAGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTg         <  1:226632/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                          aGCCAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCT‑GGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGt     >  1:1510771/1‑287 (MQ=255)
                                                                                                                                                                                                                                                                             cAATCCGACGTCAATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGTGCa  <  1:2925620/288‑1 (MQ=255)
                                                                                                                                                                                                                                                                                       |||                                                                                                                                                                                                                                                                                   
GCCCGTCTGCATAACGCATCTCAGTTAGGCAAAATCAGTTTTCTGACCATCGGTACGCTTTTGTTTACCACGCTGATTGCGGCGCTGGTCGGTGTGCTGGTCACCAACCTGTTTGGTTTGACGGCTGAAGGTCTGGTTCAGGGTGGTGCAGAAACTGCACGTCTGAACGCCATTGAAAGTAACTATGTTGGTAAAGTCTCTGATCTGAGCGTTCCGCAGCTGGTCTTGTCCTTTATCCCGAAAAACCCGTTTGCCGATCTTACCGGAGCCAATCCGACGAGTATTATCAGCGTGGTAATTTTTGCCGCATTCCTCGGCGTAGCTGCATTGAAACTGCTGAAGGATGATGCGCCGAAAGGTGAACGCGTCTTAGCCGCTATCGATACCCTACAAAGCTGGGTGATGAAACTGGTTCGCCTGGTCATGCAGTTGACCCCTTACGGCGTTCTGGCTCTAATGACCAAAGTGGTTGCAGGTTCTAACTTGCAAGACATCATCAAACTGGGAAGTTTCGTTGTCGCGTCCTACCTCGGTCTGCTGATTATGTTTGCAGTGCA  >  CP042583/1493161‑1493717

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A