Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A2 F210 I1 R1 4928 368.7 6392010 97.5% 6232209 231.9

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,508,769 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,508,7690AT99.6% 642.0 / NA 271intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (143/127);  minor base C (1/0);  total (144/127)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*CP0425831,508,7700CG99.3% 625.8 / NA 271intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (2/0);  new base G (141/126);  total (144/127)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,508,7710TA99.6% 641.5 / NA 271intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (144/126);  minor base C (0/1);  total (144/127)
Fisher's exact test for biased strand distribution p-value = 4.69e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01

Only 100 of 271 total aligned reads displayed.

GCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCACTAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACGCTACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGT  >  CP042583/1508495‑1509050
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
 tataagggaagagCCCTGGTACTAAAAATCTTCCAGGACCTGTTCCAGTTCGCGGGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTgcg                                                                                                                                                                                                                                                                             <  2:2158107/277‑1 (MQ=255)
 cacaGATTCTTTGCCCGGGTAATAAAAATCTTCCATGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTAATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTgcg                                                                                                                                                                                                                                                                             <  2:3088932/289‑1 (MQ=255)
                cTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGtt                                                                                                                                                                                                                                                              >  1:2283259/1‑289 (MQ=255)
                  ggTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTaa                                                                                                                                                                                                                                                            >  1:3142104/1‑289 (MQ=255)
                  ggTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTaa                                                                                                                                                                                                                                                            <  1:3190759/289‑1 (MQ=255)
                        aaaaaTCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTg                                                                                                                                                                                                                                                                   >  1:2158107/1‑276 (MQ=255)
                        aaaaaTCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGt                                                                                                                                                                                                                                                      <  1:2879036/289‑1 (MQ=255)
                           actCTTCCCGGCCCGGTTCCAGTTCGCGCGCCCGACAGTGTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAg                                                                                                                                                                                                                                                   <  2:168226/287‑1 (MQ=255)
                             tCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGt                                                                                                                                                                                                                                                                    <  2:2095531/270‑1 (MQ=255)
                             tCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGt                                                                                                                                                                                                                                                                    >  1:2095531/1‑270 (MQ=255)
                                  cAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCCAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCGCATCACCGTGTATTCGCGCTGAAACCACCCGTTCGACTTGCGGTGCCGTTCATGTCGCCatgtacagc                                                                                                                                                                                                                                            >  2:3023904/1‑281 (MQ=255)
                                  cAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATACCCATTGCGCCCTGCGGCGGCGCTAATGGCCTCAGTTCCAg                                                                                                                                                                                                                                             >  2:2804060/1‑288 (MQ=255)
                                       ccTGTGCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTGTAGCCAAATCGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCAAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACAcc                                                                                                                                                                                                                                       <  2:2262899/288‑1 (MQ=255)
                                           ttCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGCCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGGGGCGTTAATTGCGTCAGGTCCAGCACACCATc                                                                                                                                                                                                                                    >  2:3070669/1‑288 (MQ=255)
                                                   cgcgcgCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTc                                                                                                                                                                                                                                                     >  2:3003037/1‑263 (MQ=255)
                                                   cgcgcgCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTc                                                                                                                                                                                                                                                     <  1:3003037/263‑1 (MQ=255)
                                                   cgcgcgCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCccagcc                                                                                                                                                                                                                            >  2:2239273/1‑288 (MQ=255)
                                                   cgcgcgCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGAATCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTc                                                                                                                                                                                                                                                <  1:2332098/268‑1 (MQ=255)
                                                   cgcgcgCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGAATCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTc                                                                                                                                                                                                                                                >  2:2332098/1‑268 (MQ=255)
                                                     cgcgcCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCCACCCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTTCGCCTTGCGGTGGCTCTAATGGCGTCAGTTCCCGCACCCCATCGCccagcccg                                                                                                                                                                                                                          >  2:1567245/1‑286 (MQ=255)
                                                     cgcgcCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGcc                                                                                                                                                                                                                                                                           >  1:2963823/1‑239 (MQ=255)
                                                                  tttCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGAGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCCTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTACTGGCTTCAGTTCCATCACACAATCGCCCAGCCAGCTCCAGCC‑AAccc                                                                                                                                                                                                            >  2:43225/1‑286 (MQ=255)
                                                                        cGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCATAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAg                                                                                                                                                                                                                                             <  2:1348565/250‑1 (MQ=255)
                                                                        cGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGAt                                                                                                                                                                                                     <  1:1041488/289‑1 (MQ=255)
                                                                               aGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACAcc                                                                                                                                                                                                                                       <  1:932716/249‑1 (MQ=255)
                                                                                  aaaTAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTctcgc                                                                                                                                                                                              <  1:1696596/286‑1 (MQ=255)
                                                                                       gCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCccagc                                                                                                                                                                                                                             >  2:899525/1‑251 (MQ=255)
                                                                                           ccAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGt                                                                                                                                                                                                                                                                    <  1:3031066/208‑1 (MQ=255)
                                                                                            cAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAAcc                                                                                                                                                                                  <  1:2764483/288‑1 (MQ=255)
                                                                                                   cGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGtttttt                                                                                                                                                                          <  1:1125277/289‑1 (MQ=255)
                                                                                                     ccAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTa                                                                                                                                                                         >  2:140051/1‑288 (MQ=255)
                                                                                                          cATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGtt                                                                                                                                                                   <  1:2804060/289‑1 (MQ=255)
                                                                                                                    atatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCagag                                                                                                                                                         <  1:2601328/289‑1 (MQ=255)
                                                                                                                    atatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATAGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTTCAGTCTCATTACCGTGTATTCCCGCTTAAAGCACCAGTGCGCCTTGCGGTGGCGTTAATGGCCTCAGTTCCAGCACACCATCCCCCACACAGCGCCAGCGCTACG‑CGTTGATGTCACGCTCAGTGATAGCCGGTTTATTACCCGTTTAgtcaaca                                                                                                                                                          >  2:2500928/1‑282 (MQ=255)
                                                                                                                     tatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGcc                                                                                                                                                                                                                                 >  1:1012969/1‑217 (MQ=255)
                                                                                                                     tatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGcc                                                                                                                                                                                                                                 <  2:1012969/217‑1 (MQ=255)
                                                                                                                     tatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTAc                                                                                                                                                                        >  2:1229018/1‑273 (MQ=255)
                                                                                                                     tatCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTAc                                                                                                                                                                        <  1:1229018/273‑1 (MQ=255)
                                                                                                                         gCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGAGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGa                                                                                                                                                    <  1:43225/289‑1 (MQ=255)
                                                                                                                              ggCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGTTCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAAtt                                                                                                                                               >  1:2971291/1‑289 (MQ=255)
                                                                                                                               gCAATAACGTTTGCCCTGCGTAGGCGCGGAGGGATCCACGAGGATCACCAGCAACGGGCAACGTAACGGGATCTGGCAGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCGCCACAGGTGCCGTGTCATTACCGGGTATTCCCGGTGAAAGCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGGCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTGTTTTACCCGTTAAGGTCAGAGCAAGAAAAtt                                                                                                                                               <  2:2381774/288‑1 (MQ=255)
                                                                                                                                   tAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCa                                                                                                                                          >  1:2182607/1‑289 (MQ=255)
                                                                                                                                        tttCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGc                                                                                                                                      >  2:2638187/1‑288 (MQ=255)
                                                                                                                                         ttCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGt                                                                                                                                                                                                                                                                    >  1:768733/1‑162 (MQ=255)
                                                                                                                                         ttCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGt                                                                                                                                                                                                                                                                    <  2:768733/162‑1 (MQ=255)
                                                                                                                                         ttCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAgccagcg                                                                                                                                                                                                                        <  2:1638589/206‑1 (MQ=255)
                                                                                                                                          tCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGcccc                                                                                                                                   <  2:329175/289‑1 (MQ=255)
                                                                                                                                          tCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGccc                                                                                                                                    >  1:1292678/1‑288 (MQ=255)
                                                                                                                                             cTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGt                                                                                                                                                              <  1:55381/259‑1 (MQ=255)
                                                                                                                                                gCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCccctccct                                                                                                                             <  1:2239273/289‑1 (MQ=255)
                                                                                                                                                        gcAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTgg                                                                                                                     <  1:713429/289‑1 (MQ=255)
                                                                                                                                                        gcAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTgg                                                                                                                     <  2:2826875/289‑1 (MQ=255)
                                                                                                                                                            gaggaTTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCCCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGGCCCCCTCCTCGCCCTGGAACg                                                                                                                 >  2:1273568/1‑289 (MQ=255)
                                                                                                                                                            gaggaTTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCACGCCGTGCGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGaaaa                                                                                                                                                 >  1:3054625/1‑257 (MQ=255)
                                                                                                                                                                 ttCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAAtt                                                                                                                                               <  2:171994/254‑1 (MQ=255)
                                                                                                                                                                   cccGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTtc                                                                                                                                                                                                  >  1:688164/1‑201 (MQ=255)
                                                                                                                                                                    ccGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCTGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTTATAACCGGTTTTTTACCCGTTCAGGTCAGAGCAAGAAAATTATCCATTGCCCCCCCCCTCGCGCTGGACCGGGAAAAca                                                                                                         >  2:366198/1‑288 (MQ=255)
                                                                                                                                                                    ccGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAAcc                                                                                                         >  2:1853083/1‑288 (MQ=255)
                                                                                                                                                                            cACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGca                                                                                                                                                                                                                                           <  2:3145275/152‑1 (MQ=255)
                                                                                                                                                                             aCCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCgaga                                                                                                <  1:1321291/289‑1 (MQ=255)
                                                                                                                                                                                      cGCCAACTGAACGTGATCTCGCGGGCAAATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAAt                                                                                       <  2:694783/289‑1 (MQ=255)
                                                                                                                                                                                          aaCGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGc                                                                                   <  1:1997603/289‑1 (MQ=255)
                                                                                                                                                                                               accGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAAt                                                                              <  1:2545660/287‑1 (MQ=255)
                                                                                                                                                                                               aaCGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTTAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAAt                                                                              <  1:905170/289‑1 (MQ=255)
                                                                                                                                                                                               aaCGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGCTATTCAGTAATTGGCTCAAt                                                                              <  1:1400248/289‑1 (MQ=255)
                                                                                                                                                                                               aaCGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAAt                                                                              >  2:2453843/1‑289 (MQ=255)
                                                                                                                                                                                                aCGGGATCTCGCCGTGAGATAGCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGc                                                                                   <  1:3112742/283‑1 (MQ=255)
                                                                                                                                                                                                        tcGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGt                                                                     <  1:2454196/289‑1 (MQ=255)
                                                                                                                                                                                                              tGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGcccc                                                                                                                                   <  1:1615595/221‑1 (MQ=255)
                                                                                                                                                                                                                agaTATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCaa                                                                               >  1:457403/1‑271 (MQ=255)
                                                                                                                                                                                                                agaTATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGAATCAGTAATTGGCTCAATACATCCAGTGCTTccc                                                              >  1:254009/1‑288 (MQ=255)
                                                                                                                                                                                                                      cgcgCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTc                                                       >  1:2058405/1‑289 (MQ=255)
                                                                                                                                                                                                                            aggCAACGGGTCCGGCATCGCCACAGGTGCCGTCTAATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCgcag                                                 <  2:2971291/287‑1 (MQ=255)
                                                                                                                                                                                                                             aGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTctcgc                                                                                                                                                                                              <  1:344807/147‑1 (MQ=255)
                                                                                                                                                                                                                                  cgcgTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGc                                                                                   >  2:1181002/1‑249 (MQ=255)
                                                                                                                                                                                                                                  cgcgTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAAtt                                            >  1:856765/1‑288 (MQ=255)
                                                                                                                                                                                                                                   gcgTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTAc                                                                                                                                                                        <  2:2541515/163‑1 (MQ=255)
                                                                                                                                                                                                                                   gcgTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGc                                          >  2:1616682/1‑289 (MQ=255)
                                                                                                                                                                                                                                     gTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAAtt                                                                                                                                               <  2:3037716/186‑1 (MQ=255)
                                                                                                                                                                                                                                       ccAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCggg                                       <  1:2209674/288‑1 (MQ=255)
                                                                                                                                                                                                                                         accttctcCCCTGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCg                                    <  1:3023904/285‑1 (MQ=255)
                                                                                                                                                                                                                                               tcCACAGGTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTCAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCAAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCTCTCCCTCGCGCTGGAACGGATAAACCGAACAGATCTTCCGTAATCGGCTCAATCCATCCAATCCTTCCAGCCCTTCCCCCAGCAACTGTGGGTTCGCCAGa                              >  2:2197400/1‑289 (MQ=255)
                                                                                                                                                                                                                                                     ggTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAAt                                                                                                                                                <  2:495659/169‑1 (MQ=255)
                                                                                                                                                                                                                                                      gTGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGgca                        >  1:2419065/1‑288 (MQ=255)
                                                                                                                                                                                                                                                       tGCCGTCTCATTACCGTGTTTTCCCGCTGAAAGCGCCAGGGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCAGCGCCCAGCCAGCGCCAGCG‑AACGCCGTTCATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGgcag                       <  2:957694/288‑1 (MQ=255)
                                                                                                                                                                                                                                                       tGCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCgg                          <  2:2058405/285‑1 (MQ=255)
                                                                                                                                                                                                                                                        gCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCaa                                                                                                                                                      >  2:792972/1‑160 (MQ=255)
                                                                                                                                                                                                                                                        gCCGTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCATTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGAGCGgcagca                     >  2:575982/1‑289 (MQ=255)
                                                                                                                                                                                                                                                           gTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AGCGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTAc                                                                                                                                                                        >  1:1879796/1‑139 (MQ=255)
                                                                                                                                                                                                                                                           gTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCggg                                       <  2:2588817/268‑1 (MQ=255)
                                                                                                                                                                                                                                                           gTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCgg                          <  2:2172004/281‑1 (MQ=255)
                                                                                                                                                                                                                                                           gTCTCATTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCCCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCCCAGCAATTGCGGGCCGGCCAGATCGGCAGCCGTa                  >  2:1077516/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aTTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTATTTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCg             >  2:2905184/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                aTTACCGTGTATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGACCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGAAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCCCAGCAATTGCGTGTCGGCCAGATCGGCAGCTGTCAGGc              >  2:1935653/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                       tgtATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGCTAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCgg      >  1:1269071/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                       tgtATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCTGGTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGACCCCAGATTCAGTAATTGGCTCAATACATCCAGTGCCTCCCGCCCGTCGCCCACCAATTCCGTGTCCGCCATATCGGCAGCAGTaatcgcaccgcgg      >  2:1843939/1‑278 (MQ=255)
                                                                                                                                                                                                                                                                       tgtATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTcgcg                                                    <  1:1530527/243‑1 (MQ=255)
                                                                                                                                                                                                                                                                        gtATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGgt     >  1:264313/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                         tATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAAccgaa                                                                                                      >  1:1714316/1‑187 (MQ=255)
                                                                                                                                                                                                                                                                         tATTCCCGCTGAAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACCGAACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCggg                                       <  2:673097/254‑1 (MQ=255)
                                                                                                                                                                                                                                                                                  |||                                                                                                                                                                                                                                                                                        
GCACAGATTCTTTGCCCTGGTCATAAAAATCTTCCAGGCACTGTTCCAGTTCGCGCGCCCGACAGGTTTCTCCGCTTTCAGCAAATAGCTGCCAACGACCGCCAAACATTCGATTCATATCGCTATGGCAATAACGTTTCCCTTGCTTCAGCGCAGGAGGATTCCCGAGGATCACCAGCAACCGCCAACGTAACGGGATCTCGCCGTGAGATATCGCGCCAAGCAACGCGTCCAGCATCTCCACAGGTGCCGTCTCATTACCGTGTATTCCCGCACTAATCACCAGTGCGCCTTGCGGTGGCGTTAATGGCGTCAGTTCCAGCACACCATCGCCCAGCCAGCGCCAGCG‑AACGCCGTTGATTTCTCGCTCGGTGATAACCGGTTTTTTACCCGTTAAGGTCAGAGCAAGAAAATTATCCATTGCCCCCTCCCTCGCGCTGGAACGGATAAACGCTACCGAGATTCAGTAATTGGCTCAATACATCCAGTGCTTCCCGCCCTTCGCGCAGCAATTGCGGGTCGGCCAGATCGGCAGCAGTAAGGCGATCGCGGTAGT  >  CP042583/1508495‑1509050

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 9 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A