Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.

ALE, Flask, Isolate	Predicted Mutations	Mean Coverage	Total Reads	Percent Mapped	Mapped Reads	Average Read Length
A2 F210 I1 R1	4928	368.7	6392010	97.5%	6232209	231.9

Breseq alignment

BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP042583	1,663,862	3 bp→TGA	intergenic (–/–)	– / –	–/–

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP042583	1,663,862	0	A	T	99.0%	668.3 / NA	289	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base A (2/0); major base T (144/138); minor base G (2/1); total (149/140)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*	CP042583	1,663,863	0	C	G	99.7%	672.9 / NA	289	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base C (1/0); new base G (147/140); total (149/140)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01
*	CP042583	1,663,864	0	T	A	99.7%	677.3 / NA	289	intergenic (–/–)	–/–	–/–
Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (149/139); minor base G (0/1); total (149/140)
Fisher's exact test for biased strand distribution p-value = 4.84e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 289 total aligned reads displayed.

AGTGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATG  >  CP042583/1663584‑1664140

|||

tcaggCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGAAGGTCGGCCAGTGACTGGAgtt                                                                                                                                                                                                                                                                              >  1:2842463/4‑289 (MQ=255)

    gCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAgttgtt                                                                                                                                                                                                                                                                           <  2:2835704/288‑1 (MQ=255)

     cAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAgttgtt                                                                                                                                                                                                                                                                           <  1:1270404/287‑1 (MQ=255)

                        ggCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTTATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCAGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCACCCTGTTTAGCGATATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCCAAATCATACTCACCGGtt                                                                                                                                                                                                                                                       >  1:1825419/1‑288 (MQ=255)

                              ggCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTttcttc                                                                                                                                                                                                                                                  >  1:2426170/1‑287 (MQ=255)

                                 gATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCACAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctg                                                                                                                                                                                                                                              <  1:965560/288‑1 (MQ=255)

                                         aaaCGATGCGCCCTTTCTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTAc                                                                                                                                                                                                                                      >  1:123303/1‑288 (MQ=255)

                                               tGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAg                                                                                                                                                                                                                                <  1:282591/288‑1 (MQ=255)

                                                gcgcCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgctgct                                                                                                                                                                                                                                         >  2:664515/1‑278 (MQ=255)

                                                gcgcCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                              >  1:886290/1‑287 (MQ=255)

                                                     cTTACTGGGGGTAATTGATGACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcgaggca                                                                                                                                                                                                                         <  2:93072/289‑8 (MQ=255)

                                                       tACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcgaggcac                                                                                                                                                                                                                        >  2:2511104/1‑280 (MQ=255)

                                                       tACTGGA‑GTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTg                                                                                                                                                                                                                      <  1:3150890/289‑1 (MQ=255)

                                                            gAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcgaggca                                                                                                                                                                                                                         >  2:746230/1‑275 (MQ=255)

                                                             aGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAAt                                                                                                                                                                                                                                                               <  2:1837539/243‑1 (MQ=255)

                                                              ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCt                                                                                                                                                                                                                                                   <  1:1917122/254‑1 (MQ=255)

                                                              ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTAcc                                                                                                                                                                                                                                     >  1:1815186/1‑268 (MQ=255)

                                                              ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTAcc                                                                                                                                                                                                                                     <  2:1815186/268‑1 (MQ=255)

                                                                tAATTGATTACGGGGTGGTTTTGAAAGGGCTAAAAAGGGAGGGGGGGCATCTGCAAGATGAGGATCCGGCCCGCGGCTGGCGAACGCAGCGGGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               <  2:2927492/288‑1 (MQ=255)

                                                                tAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCTTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               <  2:2426170/288‑1 (MQ=255)

                                                                tAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               >  1:1586853/1‑288 (MQ=255)

                                                                tAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               <  1:2229812/288‑1 (MQ=255)

                                                                tAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               >  1:2007868/1‑288 (MQ=255)

                                                                  aTGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcg                                                                                                                                                                                                            >  1:1405396/1‑289 (MQ=255)

                                                                      aTTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                         <  1:3076801/288‑1 (MQ=255)

                                                                       ttcagaggggATTGTGAAAGGGCTAAATCTGGAAGGGGTGCAGCTGCAGGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGGAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATcgtcgt                                                                                                                                                                                                        <  2:3193847/279‑1 (MQ=255)

                                                                       ttACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                              >  1:1852079/1‑264 (MQ=255)

                                                                          cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAct                                                                                                                                                                                                     >  1:2927492/1‑288 (MQ=255)

                                                                          cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTAc                                                                                                                                                                                                      >  1:2061646/1‑287 (MQ=255)

                                                                             ggTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCg                                                                                                                                                                                                                 <  1:1070808/273‑1 (MQ=255)

                                                                             ggTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCg                                                                                                                                                                                                                 >  2:1070808/1‑273 (MQ=255)

                                                                               tGATTGTGGAAGGGCTAAATGTGGACGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTgg                                                                                                                                                                                                <  2:263069/288‑1 (MQ=255)

                                                                               tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAACGCCAACGGTCGGCCAGTGACTGGAGTTGTGCAAAATCATAATCACCGCTTTCCTCGCTGCGCCTTCCCCTCAGCGCGGCACTGAGCCGTATCGCCGTCCGCTTGGc                                                                                                                                                                                               >  2:3128065/1‑289 (MQ=255)

                                                                               tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCt                                                                                                                                                                                                                                                   >  2:1156307/1‑237 (MQ=255)

                                                                               tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCt                                                                                                                                                                                                                                                   <  1:1156307/237‑1 (MQ=255)

                                                                               tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                               >  1:2614020/1‑289 (MQ=255)

                                                                               tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTAGCGCTCGCGAATACCCGATTACGCCCAGCCTGTTCAGCGAGATAAATCCGACGGTCGGCCAGACACTGGAGTTCTTCAAACGCCTCACCACCGGTTCCCTCGCGGCCGCTTACCCCCACCGAGGCCCTGAAGCGTACcgtcgtcatctcgg                                                                                                                                                                                                >  2:412023/1‑280 (MQ=255)

                                                                               tGATAGTGAAAGGGCTAAATCGTGAAGGGGAGCATCTGCATGATGCGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTCTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAACACCCGATTACGCCCAGCCTGTTTAGCCACATAAAGCCGACGGTCGGCCAGGGACTGGAGTTGCTGAAACACCTACTCACCGGTTTCCTCCCTGCCGTCTACCCGCAGCGAGCAACCGATGCGTACCGTCGTACTCCTga                                                                                                                                                                                                >  2:1057358/1‑287 (MQ=255)

                                                                                   tgggAAAGGGCTACATCGTGAAGGGGGTCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATc                                                                                                                                                                                           <  2:2842463/286‑1 (MQ=255)

                                                                                         aGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACa                                                                                                                                                                                       >  1:1009843/1‑287 (MQ=255)

                                                                                           ggCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcgagg                                                                                                                                                                                                                           >  2:695281/1‑244 (MQ=255)

                                                                                           ggCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcgagg                                                                                                                                                                                                                           <  1:695281/249‑6 (MQ=255)

                                                                                             cTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               >  1:733594/1‑259 (MQ=255)

                                                                                                      gAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTa                                                                                                                                                                        >  1:2140613/1‑289 (MQ=255)

                                                                                                           ggTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAAttt                                                                                                                                                                    <  1:2640453/288‑1 (MQ=255)

                                                                                                              gCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGt                                                                                                                                                                <  1:2848147/289‑1 (MQ=255)

                                                                                                               cATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGTGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTg                                                                                                                                                                                                                      >  1:502211/1‑234 (MQ=255)

                                                                                                               cATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgc                                                                                                                                                                                                                                             <  1:2119564/211‑1 (MQ=255)

                                                                                                               cATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgc                                                                                                                                                                                                                                             >  2:2119564/1‑211 (MQ=255)

                                                                                                                 tCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGAAGAGTGAGGGGCCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGa                                                                                                                                                             <  2:164243/289‑1 (MQ=255)

                                                                                                                    gCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTc                                                                                                                                                                   >  2:279409/1‑280 (MQ=255)

                                                                                                                          tgaGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgct                                                                                                                                                                                                                                               >  2:3158646/1‑198 (MQ=255)

                                                                                                                          tgaGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                               <  2:1743144/246‑1 (MQ=255)

                                                                                                                             ggATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGGTAAGCGTTCTCGCTCGCGAATACCCGAGTACGCCCAGCCTGCTTAGCGAGATAAAGCCGACGGTCGGGCGGAGACTGGAGTTGTCCCAAATCATAATCACCTGTTTACTCGCTTCTGGTTACCCCCAGCGACGCGCAGATGGCTATTGTCGGTCTTTTGGGTTCCAACCTCTCTTTTTCATTTAATCGTAGTCGAATAccgtcttc                                                                                                                                                  >  2:3065105/1‑281 (MQ=255)

                                                                                                                               aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGt                                                                                                                                                                <  1:2500187/272‑1 (MQ=255)

                                                                                                                               aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGAACTGAGGGGTATAGTTGTACTCTTGGCCGACGACAACTATTTTTCATTTTATTTTAGTGCAATTCGTTCTGcta                                                                                                                                                >  2:503072/1‑286 (MQ=255)

                                                                                                                                    gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGTTGCGTATCGTCGTACCCTTGGCGACCAACCTCTCTTTTTCCTTTAATTTCAGTCGAATACGTTCTGCTACcccc                                                                                                                                           >  2:1854964/1‑288 (MQ=255)

                                                                                                                                     ccccggTCTGACGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCg                                                                                                                                          <  2:1009843/283‑1 (MQ=255)

                                                                                                                                        gcgTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGc                                                                                                                                      <  2:123303/289‑1 (MQ=255)

                                                                                                                                          gTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                     <  2:2233347/288‑1 (MQ=255)

                                                                                                                                                    cGCAGCGTGAATGACCGGAAGGATGGCGAGAAGGGCTGGACCATTTTTTATCCGCCCGTTAAACCTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGACCAGGGACTGAAGTTGTTCAAAATCATCAACCCCGGTTTGCTCGCTGCTGCTTACCCCCAGCGCGGACCTGAGGCGTATCGTCGTCATCTTGGCTACCAACATCCTTTTTCCATTTAATTTCAGTCTAAGACGTACTGCGACTACCTCATCCTCCGTCAGAc                                                                                                                           >  2:2294365/1‑288 (MQ=255)

                                                                                                                                                    cGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgctgct                                                                                                                                                                                                                                         <  2:1944708/178‑1 (MQ=255)

                                                                                                                                                             aaGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgc                                                                                                                                                                                                                                             >  2:2670223/1‑165 (MQ=255)

                                                                                                                                                                 aCCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTgg                                                                                                                 >  2:1592884/1‑285 (MQ=255)

                                                                                                                                                                     gAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCGTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGCGTGGTTCAAAATCCTAATCACCGGCTTCCGTGCTGCTGCCTACCCCCAGCGAGGCACCGATCCGTATCGTCGTGCTCTTGGCGATCATGCTCCCCTTTCTCTTTAAGTCCAGTTGAATACGTTGCGCGACCTCCGCCACCTCACTCAGACTCCCGccatgtcgaacac                                                                                                         >  2:1210996/1‑278 (MQ=255)

                                                                                                                                                                     gAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgt                                                                                                                                                                                                           <  1:2451983/191‑1 (MQ=255)

                                                                                                                                                                     gAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgt                                                                                                                                                                                                           >  2:2451983/1‑191 (MQ=255)

                                                                                                                                                                                   aGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAActcctc                                                                                            >  1:2310023/1‑288 (MQ=255)

                                                                                                                                                                                       cTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                         >  2:3088829/1‑175 (MQ=255)

                                                                                                                                                                                               ttttttCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                              <  1:1052862/146‑3 (MQ=255)

                                                                                                                                                                                                       ccGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                               <  1:2271116/153‑1 (MQ=255)

                                                                                                                                                                                                         gCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACg                                                                      >  1:2741424/1‑288 (MQ=255)

                                                                                                                                                                                                          cccGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCCCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACCCCTCACCACCGCCCCTCCCCGCAACgc                                                                     >  2:1263617/1‑287 (MQ=255)

                                                                                                                                                                                                           ccGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTcc                                                                   <  1:764656/289‑1 (MQ=255)

                                                                                                                                                                                                               tAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTgcg                                                               <  1:1524378/289‑1 (MQ=255)

                                                                                                                                                                                                                        tcgctcgcGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAgg                                                      <  2:810075/289‑1 (MQ=255)

                                                                                                                                                                                                                            tcgcGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACt                                                  <  1:658337/289‑1 (MQ=255)

                                                                                                                                                                                                                             cgcgAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCttttt                                                                                                                                                                              >  1:810533/1‑164 (MQ=255)

                                                                                                                                                                                                                             cgcgAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACt                                                  >  1:1696155/1‑288 (MQ=255)

                                                                                                                                                                                                                             cgcgAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTg                                                 <  1:1630618/289‑1 (MQ=255)

                                                                                                                                                                                                                                      ccGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                              >  1:3195531/1‑105 (MQ=255)

                                                                                                                                                                                                                                          ttACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGcgcacgca                                                         <  1:1373256/268‑1 (MQ=255)

                                                                                                                                                                                                                                              gCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCt                                                                                                                                                    <  1:2547950/173‑1 (MQ=255)

                                                                                                                                                                                                                                               cccATCCTGTTTAGCGGGATAACGCCGACGGTCGGCCAGGGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgcagca                               <  2:2604709/289‑1 (MQ=255)

                                                                                                                                                                                                                                               cccAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                  <  2:2890324/222‑1 (MQ=255)

                                                                                                                                                                                                                                               cccAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                  >  1:2890324/1‑222 (MQ=255)

                                                                                                                                                                                                                                                ccAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAcccgcc                                                                              <  1:442005/241‑1 (MQ=255)

                                                                                                                                                                                                                                                 cAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATg                             <  1:305238/289‑1 (MQ=255)

                                                                                                                                                                                                                                                    ccTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATgagc                          >  1:2604709/1‑288 (MQ=255)

                                                                                                                                                                                                                                                    ccTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATgaga                          >  1:3113858/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                  tAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                         >  1:628825/1‑100 (MQ=255)

                                                                                                                                                                                                                                                                  tAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                         <  2:628825/100‑1 (MQ=255)

                                                                                                                                                                                                                                                                     aGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTcgccc          >  2:1045690/1‑288 (MQ=255)

                                                                                                                                                                                                                                                                          aCGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGt                                                                                                                                                                >  2:1561387/1‑133 (MQ=255)

                                                                                                                                                                                                                                                                          aCGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGCATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCAGGCAGCATGAGAAAGACCACGGTCGCCCGCCgga    >  2:460806/1‑289 (MQ=255)

                                                                                                                                                                                                                                                                          aCGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGa                                                                                                                                                >  2:2049418/1‑149 (MQ=255)

                                                                                                                                                                                                                                                                          aCGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCtg     <  2:143761/288‑1 (MQ=255)

                                                                                                                                                                                                                                                                          aCGGTCGGCCAGTGACTGGAGTTGATCAAGATCCTAATGACTGGTTTACTGGCTGTTGCTTACCCCCAGCGAGGCACTTATGCGTGTCGTCGTACTCTTGGCGATCAACATCTCTTTTTCGTTTAATTTCAGTCGACTCAGTTCTGCGTCCTCCACATCCTCGGTCAGACAAAACCCTGTCAGAATCACACAAGCCTCCTCGCCACCATCCCGGCCGCCAACGGCCTGCGCACCACAGGAACGACTAATCCCTGCGGCCTGTTCAGCAAGAACACGGTcgtccggacgg    >  2:869753/1‑284 (MQ=255)

                                                                                                                                                                                                                                                                           cGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTgcgc                                                              <  2:1387396/230‑1 (MQ=255)

                                                                                                                                                                                                                                                                           cGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTgcgc                                                              <  2:2549193/230‑1 (MQ=255)

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AGTGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGATG  >  CP042583/1663584‑1664140

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 9 ≤` `ATCG/ATCG` `< 22 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 38 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`

GATK/CNVnator alignment

N/A