Sample Resequencing Stats

Note: The mutation counts shown below represent unfiltered mutation sets.
ALE, Flask, Isolate Predicted Mutations Mean Coverage Total Reads Percent Mapped Mapped Reads Average Read Length
A3 F210 I1 R1 4927 250.2 4002508 96.7% 3870425 266.6

Breseq alignment

BRESEQ :: Evidence
Predicted mutation
evidence seq id position mutation annotation gene description
RA CP042583 1,663,862 3 bp→TGA intergenic (–/–) – / – –/–

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0425831,663,8620AT99.6% 530.2 / ‑6.2 227intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base T (113/112);  minor base C (1/0);  total (115/112)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.81e-01
*CP0425831,663,8630CG99.6% 530.8 / NA 227intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base C (0/0);  major base G (115/111);  minor base T (0/1);  total (115/112)
Fisher's exact test for biased strand distribution p-value = 4.93e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
*CP0425831,663,8640TA98.2% 529.0 / NA 227intergenic (–/–)–/––/–
Reads supporting (aligned to +/- strand):  ref base T (0/0);  major base A (111/112);  minor base C (4/0);  total (115/112)
Fisher's exact test for biased strand distribution p-value = 1.22e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 227 total aligned reads displayed.

TGAGTGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGAT  >  CP042583/1663582‑1664139
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
tgtcaggCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAg                                                                                                                                                                                                                                                                               <  1:725733/284‑1 (MQ=255)
    aggCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAgttgt                                                                                                                                                                                                                                                                           >  2:719773/2‑289 (MQ=255)
                aaCCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATaa                                                                                                                                                                                                                                                               >  1:709752/1‑289 (MQ=255)
                      acTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCg                                                                                                                                                                                                                                                         >  1:979545/1‑289 (MQ=255)
                          ggCCTGGGAGATGGGCCAAACGATGCAGCCATACTGGAGGTAATGGATTAAGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTAGCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGttt                                                                                                                                                                                                                                                     <  2:1209715/289‑1 (MQ=255)
                             cTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCt                                                                                                                                                                                                                                                  <  1:736049/289‑1 (MQ=255)
                              tGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTc                                                                                                                                                                                                                                                 >  1:291209/1‑289 (MQ=255)
                                ggCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTc                                                                                                                                                                                                                                                 >  1:1201925/1‑287 (MQ=255)
                                ggCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTc                                                                                                                                                                                                                                                 >  1:1303468/1‑287 (MQ=255)
                                ggCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCg                                                                                                                                                                                                                                                >  2:835382/1‑288 (MQ=255)
                                   gATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctg                                                                                                                                                                                                                                             <  1:459420/288‑1 (MQ=255)
                                    aTGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCgctgg                                                                                                                                                                                                                                            <  2:1301195/288‑2 (MQ=255)
                                          cAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTa                                                                                                                                                                                                                                      <  1:940851/288‑1 (MQ=255)
                                            aaCGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTGCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTAcc                                                                                                                                                                                                                                    >  1:1953799/1‑288 (MQ=255)
                                                 tGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgc                                                                                                                                                                                                                              >  1:137439/1‑288 (MQ=255)
                                                 tGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgc                                                                                                                                                                                                                              >  1:1422346/1‑288 (MQ=255)
                                                                ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTg                                                                                                                                                                                                                     >  1:56179/1‑283 (MQ=255)
                                                                ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGt                                                                                                                                                                                                               >  1:1341203/1‑289 (MQ=255)
                                                                ggTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGt                                                                                                                                                                                                               >  1:189816/1‑289 (MQ=255)
                                                                  tAATGGATTCCGCTGTGATTGTGAGAGGGCTAAATCGTGAAGGGGTGCATCTGAGTGATGGGGATCCGGCCCGCGTCTGGGGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                              <  2:1341203/288‑1 (MQ=255)
                                                                  tAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                              <  1:1109033/288‑1 (MQ=255)
                                                                  gaaggggttACGGGGTGGTTGTGAACGGGCTAAAGCGTGAAGGGGTGCATCTGCATGGTGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                              <  2:1041477/281‑1 (MQ=255)
                                                                   aaTGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtc                                                                                                                                                                                                            >  1:1246993/1‑289 (MQ=255)
                                                                        aTTACGCGGTGATTGTGAAGGGGCGAAAGCGGGAAGGGGTGGATCTGCATGATGAGGATCCGGGCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                        <  2:1805241/288‑1 (MQ=255)
                                                                          tACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                             <  1:811240/265‑3 (MQ=255)
                                                                          tACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                             >  2:811240/1‑263 (MQ=255)
                                                                          tACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTa                                                                                                                                                                                                      >  1:1041477/1‑288 (MQ=255)
                                                                            cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCtt                                                                                                                                                                                                                                       >  1:259139/1‑253 (MQ=255)
                                                                            cgcgGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCtt                                                                                                                                                                                                                                       <  2:259139/253‑1 (MQ=255)
                                                                                 tGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGc                                                                                                                                                                                              >  2:624991/1‑289 (MQ=255)
                                                                                        gAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCaa                                                                                                                                                                                        <  2:1246993/288‑1 (MQ=255)
                                                                                         aaaGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCACCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGATGCTTACCCCCAGCGAGGCACTGATACGTACCGTCGTACCCTTGGCGATCAACa                                                                                                                                                                                      >  2:1643569/1‑289 (MQ=255)
                                                                                           aGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGCCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATCCTTATCGTCGTCCTCTTGGCGCTCAAcc                                                                                                                                                                                      >  1:1568836/1‑286 (MQ=255)
                                                                                             ggCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGGTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATAACCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGACAGCGCCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGGGGCACTGATGCGGATCGTCGTACTCTTGGCGATCAACAtc                                                                                                                                                                                    >  1:1239927/1‑287 (MQ=255)
                                                                                             ggCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAg                                                                                                                                                                                                                               <  1:650409/244‑1 (MQ=255)
                                                                                                     cgggAATGGGTTGATCTGCAGGGTGGGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCAt                                                                                                                                                                          <  2:687353/286‑1 (MQ=255)
                                                                                                       tGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTAcccc                                                                                                                                                                                                                                  <  2:1375025/231‑1 (MQ=255)
                                                                                                       tGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCAttt                                                                                                                                                                        >  1:347860/1‑289 (MQ=255)
                                                                                                       tGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCAttt                                                                                                                                                                        >  2:780243/1‑289 (MQ=255)
                                                                                                        gAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTa                                                                                                                                                                       >  1:1987908/1‑289 (MQ=255)
                                                                                                             ggTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTGTTCATTTAAttt                                                                                                                                                                   <  1:1643569/288‑1 (MQ=255)
                                                                                                              gTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCa                                                                                                                                                                 >  2:961725/1‑289 (MQ=255)
                                                                                                                gCATCTGCATGATGAGGAGCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGt                                                                                                                                                               <  1:751926/289‑1 (MQ=255)
                                                                                                                      gCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATa                                                                                                                                                         >  1:470517/1‑289 (MQ=255)
                                                                                                                            tgaGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCt                                                                                                                                                   >  1:1622609/1‑289 (MQ=255)
                                                                                                                              aGGATCCGGCCCGCGTCTGGCGAACGCAGCATGAAGGACAGGAAGGATGGCGTGAAGGGCTGGACCCTTTTTTCTCCGCACGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAACCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATAATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGGGTATCGTCGTACTCTTGGCGTACAACACCCCTTTTTCATTTAATTTCAGTCGCATACGTTCTGc                                                                                                                                                 >  1:1735482/1‑289 (MQ=255)
                                                                                                                                gATCCGGCCCGCGTCTGGCGAACGCAGCATGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGCCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCCACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGcc                                                                                                                                                >  2:1150757/1‑287 (MQ=255)
                                                                                                                                 aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATTAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCCCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGa                                                                                                                                               >  1:522452/1‑288 (MQ=255)
                                                                                                                                 aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                             <  2:579474/210‑3 (MQ=255)
                                                                                                                                 aTCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGGATCGTCGTACTCTTGGCGATCAACTTCACTTTTTCATTTAATTTCAGTCGAATCCGTTCTGCGa                                                                                                                                               >  2:1844535/1‑288 (MQ=255)
                                                                                                                                  tCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGAc                                                                                                                                              <  1:349552/288‑1 (MQ=255)
                                                                                                                                      gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAgcg                                                                                                                                                                                                                             <  2:1987765/205‑3 (MQ=255)
                                                                                                                                      gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTa                                                                                                                                                                                                              >  1:185501/1‑220 (MQ=255)
                                                                                                                                      gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATAc                                                                                                                                                        >  1:1320664/1‑274 (MQ=255)
                                                                                                                                      gCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATAc                                                                                                                                                        <  2:1320664/274‑1 (MQ=255)
                                                                                                                                       cccGAGTCGGGCGAACGCAGCGTGAAGGACCGGAAGGATGGGGTGACGGACTGGCCCATGTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCg                                                                                                                                         <  2:1944537/288‑1 (MQ=255)
                                                                                                                                          gcgTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAg                                                                                                                                      >  1:214363/1‑288 (MQ=255)
                                                                                                                                           cgTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGc                                                                                                                                     >  2:925694/1‑288 (MQ=255)
                                                                                                                                           cgTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGc                                                                                                                                     >  1:1717980/1‑288 (MQ=255)
                                                                                                                                            gtttGGCGAAACCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                    <  2:563480/285‑1 (MQ=255)
                                                                                                                                                      cGCAGCGTGAAGGCCCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTCTCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACt                                                                                                                         <  1:985160/289‑1 (MQ=255)
                                                                                                                                                            gTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTcgcg                                                                                                                     <  1:583386/287‑1 (MQ=255)
                                                                                                                                                                   aCCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCttt                                                                                                                                                                               <  1:1450316/222‑1 (MQ=255)
                                                                                                                                                                   aCCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCttt                                                                                                                                                                               >  2:1450316/1‑222 (MQ=255)
                                                                                                                                                                    ccGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGaa                                                                                                           <  1:1260859/289‑1 (MQ=255)
                                                                                                                                                                     cGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                        >  2:493262/1‑195 (MQ=255)
                                                                                                                                                                     cGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTAtcgtcg                                                                                                                                                                                                        <  1:493262/195‑1 (MQ=255)
                                                                                                                                                                            aTGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACTTTCTTCGACTTCCGCACCCTCCGTCAGACTCGCCCCTGGCAGAATCACCCaa                                                                                                   >  2:1889915/1‑289 (MQ=255)
                                                                                                                                                                               gCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                 >  1:1193648/1‑288 (MQ=255)
                                                                                                                                                                               gCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCAGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACaaaa                                                                                                 <  1:40377/288‑1 (MQ=255)
                                                                                                                                                                                    aaGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAActcct                                                                                            <  1:835382/288‑1 (MQ=255)
                                                                                                                                                                                             aCCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAc                                                                                  <  2:347860/289‑1 (MQ=255)
                                                                                                                                                                                                 ttttttCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAcccg                                                                               >  2:52620/1‑288 (MQ=255)
                                                                                                                                                                                                  tttttCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGAcccgcc                                                                             <  2:1495889/289‑1 (MQ=255)
                                                                                                                                                                                                       ctcCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCa                                                                        <  1:996945/289‑1 (MQ=255)
                                                                                                                                                                                                        tcgacctgTTAAGCGTTATCGGTGGGTAATACCCGAGTAGTCCCAGCATGTTTGGCGAGATATAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCCCCGGTGGCCTCGCTGCTGCTCACCCCCAGCGAGGCACTGATGCGTATCGTCGTACACTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATAACACAAAACTCCTCACCACCGACCCGCCCGGCa                                                                        <  2:1570328/281‑1 (MQ=255)
                                                                                                                                                                                                           gCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGAc                                                                                                                                              >  2:614614/1‑215 (MQ=255)
                                                                                                                                                                                                           gCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGAc                                                                                                                                              <  1:614614/215‑1 (MQ=255)
                                                                                                                                                                                                                       ttATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGcgcacgca                                                        >  1:102228/1‑289 (MQ=255)
                                                                                                                                                                                                                        tATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGcgcacgca                                                        <  2:451905/288‑1 (MQ=255)
                                                                                                                                                                                                                         aTCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                    >  1:1733000/1‑211 (MQ=255)
                                                                                                                                                                                                                         aTCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGcc                                                                                                                                    <  2:1733000/211‑1 (MQ=255)
                                                                                                                                                                                                                                               cGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTTATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgcag                                <  2:291209/289‑1 (MQ=255)
                                                                                                                                                                                                                                                gCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgcagc                               >  1:600681/1‑289 (MQ=255)
                                                                                                                                                                                                                                                  ccAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgcagca                              <  1:768393/288‑1 (MQ=255)
                                                                                                                                                                                                                                                     gCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGgcagca                              <  2:820184/285‑1 (MQ=255)
                                                                                                                                                                                                                                                      ccTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCa                                                                                                                                                                 >  1:892092/1‑153 (MQ=255)
                                                                                                                                                                                                                                                      ccTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCa                                                                                                                                                                 <  2:892092/153‑1 (MQ=255)
                                                                                                                                                                                                                                                      ccTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATaaga                         >  1:1558585/1‑289 (MQ=255)
                                                                                                                                                                                                                                                       cTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATgaga                         <  1:866194/288‑1 (MQ=255)
                                                                                                                                                                                                                                                          tttAGCGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGagaaaga                     >  1:1589518/1‑289 (MQ=255)
                                                                                                                                                                                                                                                               cGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTc                                                                   <  1:381741/238‑1 (MQ=255)
                                                                                                                                                                                                                                                               cGAGATAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTc                                                                   >  2:381741/1‑238 (MQ=255)
                                                                                                                                                                                                                                                                gagaTAAAGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACg                >  2:538545/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                     aaaGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTcgcc          <  1:538058/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                      aaGCCGACGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTcgccc         <  2:51242/289‑1 (MQ=255)
                                                                                                                                                                                                                                                                            aCGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCCCACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACGTCTAATTAAACCGGCAGCATGTGAAAGAACACGGTCTCCCGCCtg    >  2:1602437/1‑288 (MQ=255)
                                                                                                                                                                                                                                                                             cGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCtgat  >  1:451682/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                             cGGTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCtgat  >  1:921303/1‑289 (MQ=255)
                                                                                                                                                                                                                                                                              ggTCGGCCAGTGACTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGCGAGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCgg                                   <  1:1479068/255‑1 (MQ=255)
                                                                                                                                                                                                                                                                                        |||                                                                                                                                                                                                                                                                                   
TGAGTGGCAAACGCCCAACCACACTTGGCCTGGGCGATGGGCCAAACGATGCGCCCTTACTGGAGGTAATGGATTACGCGGTGATTGTGAAAGGGCTAAATCGTGAAGGGGTGCATCTGCATGATGAGGATCCGGCCCGCGTCTGGCGAACGCAGCGTGAAGGACCGGAAGGATGGCGTGAAGGGCTGGACCATTTTTTCTCCGCCCGTTAAGCGTTATCGCTCGCGAATACCCGATTACGCCCAGCCTGTTTAGCGAGATAAAGCCGACGGTCGGCCAGACTCTGGAGTTGTTCAAAATCATAATCACCGGTTTCCTCGCTGCTGCTTACCCCCAGGCTGGCACTGATGCGTATCGTCGTACTCTTGGCGATCAACATCTCTTTTTCATTTAATTTCAGTCGAATACGTTCTGCGACCTCCGCAGCCTCCGTCAGACTCGCGCCTGGCAGAATCACACAAAACTCCTCACCACCGACCCGCCCGGCAACGTCCTGCGCACGCAAGGAACTGCTAATTAATCCGGCAGCATGAGAAAGAACACGGTCGCCCGCCTGAT  >  CP042583/1663582‑1664139

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑

GATK/CNVnator alignment

N/A