Sample Resequencing Stats
Note: The mutation counts shown below represent unfiltered mutation sets.
| ALE, Flask, Isolate |
Predicted Mutations |
Mean Coverage |
Total Reads |
Percent Mapped |
Mapped Reads |
Average Read Length |
|
A3 F210 I1 R1
|
4927 |
250.2 |
4002508 |
96.7% |
3870425 |
266.6 |
Breseq alignment
BRESEQ :: Evidence
|
| evidence |
seq id |
position |
mutation |
annotation |
gene |
description |
| RA |
CP042583 |
1,487,450 |
3 bp→CGA |
intergenic (–/–) |
– / – |
–/– |
|
| |
seq id |
position |
ref |
new |
freq |
score (cons/poly) |
reads |
annotation |
genes |
product |
| * | CP042583 | 1,487,450 | 0 | G | C | 99.6%
| 612.4
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (138/123); minor base A (0/1); total (138/124) |
| Fisher's exact test for biased strand distribution p-value = 4.73e-01 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.95e-01 |
| * | CP042583 | 1,487,451 | 0 | C | G | 100.0%
| 616.5
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (138/124); total (138/124) |
| * | CP042583 | 1,487,452 | 0 | T | A | 99.2%
| 616.5
/ NA
| 262 | intergenic (–/–) | –/– | –/– |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base A (137/123); minor base C (1/1); total (138/124) |
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 |
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 |
Only 100 of 262 total aligned reads displayed.
AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGGCTTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACGCTAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCTACGCC > CP042583/1487172‑1487730
|||
cTGTGGAGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCg < 1:1412107/289‑1 (MQ=255)
tgGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTaa > 2:1599259/1‑289 (MQ=255)
tATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACCGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTTAACTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGCCTTCATCGTTGTGTATTCCGCGACAAAGACCGAACCACCCTGCGTAAAtttc > 2:1846600/1‑287 (MQ=255)
tgttgtTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCg > 2:979379/1‑289 (MQ=255)
gttgttGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGt < 1:859950/289‑1 (MQ=255)
gttgCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgt < 1:345645/289‑1 (MQ=255)
gCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCCGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATTCGCTTTCGGAGTGCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTACATTTAGCTTTctcag > 2:1183655/1‑289 (MQ=255)
aCGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtca > 2:1855927/1‑289 (MQ=255)
aCGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtca > 2:1452880/1‑289 (MQ=255)
aCGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGAGGAAATTTAGCGTTttcagtca > 2:721067/1‑289 (MQ=255)
gTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtcagtca > 1:1735641/1‑287 (MQ=255)
caATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCa < 2:784324/285‑1 (MQ=255)
caATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATTCa > 1:1005040/1‑289 (MQ=255)
aTGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATa < 2:1303164/289‑1 (MQ=255)
ggggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCg < 2:521449/289‑1 (MQ=255)
ggggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCg < 1:1452880/289‑1 (MQ=255)
gggCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATCACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGATTTCAGCGTTGTTTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAACGTTTTCAGTCACCTGACATGCATAACCCCCgg > 1:796490/1‑289 (MQ=255)
gcgCTGGGCAGTGACAAACGAAGACAGCAAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTGCAGCGTTGTGGCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCg < 2:1747549/286‑1 (MQ=255)
aGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCAt > 1:410476/1‑289 (MQ=255)
tGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtca > 1:165470/1‑253 (MQ=255)
tGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTgtca < 2:165470/253‑1 (MQ=255)
tGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGccc > 1:1358524/1‑289 (MQ=255)
taaaattatctgCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCg > 1:971912/12‑289 (MQ=255)
ccAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCa > 2:6725/1‑288 (MQ=255)
cATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTg > 2:1212249/1‑289 (MQ=255)
cacGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGt < 1:419065/289‑1 (MQ=255)
tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCaa > 1:1824732/1‑224 (MQ=255)
tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCgg > 2:751762/1‑244 (MQ=255)
tCCGGCAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCa < 2:1718734/276‑1 (MQ=255)
cAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCATAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGGTTCACTGGCCTGGTCGGTATATTTGTCg > 2:1404134/1‑289 (MQ=255)
cAGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGc < 1:472077/270‑1 (MQ=255)
aGATAATTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCg < 1:1846600/288‑1 (MQ=255)
tAATTTTACATGCTGTAGCCAAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTATAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGt < 1:1183655/286‑1 (MQ=255)
aaTTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg < 2:932099/289‑1 (MQ=255)
aaTTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg < 2:1912117/289‑1 (MQ=255)
aaTTTTACATGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg < 1:1748217/289‑1 (MQ=255)
aTGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACAccc > 1:24401/1‑180 (MQ=255)
aTGCTGTAGCCCAGCGATAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACAccc < 2:24401/180‑1 (MQ=255)
gcgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCaa < 2:1688687/189‑1 (MQ=255)
gcgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCCTAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTAGATTTGTCGTAAAGCACAACTGGACCGAATTCaaa > 2:1878939/5‑289 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCa < 1:1258609/195‑1 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCCTAGCCCAGCGGCTGGGTTTCACTGGCCTTGTCGGTATATTTCGCGTAACGCACACCTGGAACGAATTCAAAg > 2:35540/4‑289 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa > 2:1077092/4‑288 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa > 1:998497/4‑288 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa > 1:1024288/4‑288 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa > 1:1811613/4‑288 (MQ=255)
cgatAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCaaa > 1:1158054/4‑288 (MQ=255)
aaGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGa < 1:1795201/289‑1 (MQ=255)
ttgccGACGCTCGGTATGTTCCAGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTACAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACt < 2:1270286/285‑1 (MQ=255)
tcggtATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGc < 2:952468/289‑1 (MQ=255)
tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATACGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCCAAACCTg > 1:1570330/1‑288 (MQ=255)
tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCTATTCAAAAACTg > 1:1600990/1‑288 (MQ=255)
tGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTg > 1:678465/1‑288 (MQ=255)
gCAGACGCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTga < 1:1866708/288‑1 (MQ=255)
aCTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGAcc > 1:541786/1‑289 (MQ=255)
ccgggAGGTTATGAGTTCCAGGTGCCGTTGTAAGCCACCTTCAGTCCAAAAGGGTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCAt < 2:1955033/286‑1 (MQ=255)
tGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATa > 1:1487893/1‑288 (MQ=255)
ggAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg < 2:1545452/224‑1 (MQ=255)
ggAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTACGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACTCACCCATGCACCGAGGTCAAAGCGGAAACAGTGTTCTGGGCCAGTCAAAAACCGACGACTATaa > 2:1023088/1‑288 (MQ=255)
ggTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAccc < 1:1404134/288‑1 (MQ=255)
ggTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAccc < 2:90332/288‑1 (MQ=255)
ggTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAAccc < 1:1077092/288‑1 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCaa < 1:1725581/142‑1 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCaa > 2:1725581/1‑142 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTTGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGt < 2:386503/289‑1 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGc > 1:1685233/1‑258 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCgg > 1:192518/1‑288 (MQ=255)
cAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGCGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACTGAATTCAAAGCGGAACCTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCgggg > 2:799695/1‑288 (MQ=255)
aTGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATc < 1:1212249/289‑1 (MQ=255)
tgtgACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATc > 1:378459/1‑288 (MQ=255)
aCGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAGAACTGACGACCATAACCCGCGGTCAACACATCgcgc > 1:1888003/1‑288 (MQ=255)
cGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACg < 1:1042385/202‑1 (MQ=255)
tGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCg > 2:1104267/1‑289 (MQ=255)
tAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTga < 1:1273020/252‑1 (MQ=255)
tAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGAt < 2:286786/289‑1 (MQ=255)
aaGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATa < 1:278632/289‑1 (MQ=255)
cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGc < 2:548512/287‑1 (MQ=255)
cACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGc < 2:344036/287‑1 (MQ=255)
ccTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTTGGTATATTTGTCGTAACGCACACCTGGACCGAATCCAAAGCGGCAACTGTGTACTGGGCCATGCAAAAACTGACGACAATAACCCACGGTCAACACTTCGCCCTCACGACATCCGtt > 2:236449/1‑289 (MQ=255)
cTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAaca < 1:92741/266‑1 (MQ=255)
tCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCCCGGTCAACACATCGCGCTCTCCATACCCGTtaaa > 2:1805049/1‑287 (MQ=255)
tCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACgg > 1:1714311/1‑289 (MQ=255)
ccAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACg < 1:574408/287‑1 (MQ=255)
tCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTcagcc > 2:1560453/1‑289 (MQ=255)
tCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCACGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTcagcc > 1:13441/1‑289 (MQ=255)
aGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGa > 2:1043551/1‑191 (MQ=255)
gCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACg > 2:61090/1‑269 (MQ=255)
aCATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGAc < 1:610995/289‑1 (MQ=255)
tGCGCTTTCGGAGTCCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCaaataaa < 1:1628585/289‑1 (MQ=255)
cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCgg < 2:1640581/174‑1 (MQ=255)
cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTc > 2:1736141/1‑257 (MQ=255)
cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTg > 2:1193108/1‑275 (MQ=255)
cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTg < 1:1193108/275‑1 (MQ=255)
cTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAg > 1:150828/1‑288 (MQ=255)
aGTTCAGCGTTGTGTCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTATCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAAt < 1:655591/288‑1 (MQ=255)
gTTGTGTCTTCCGAGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGttaaat < 1:1946202/289‑1 (MQ=255)
tgtCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGa < 2:411841/221‑1 (MQ=255)
tgtCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAAGCAGttaaatcaaa > 1:779303/1‑289 (MQ=255)
tCTTCCGCGCCAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACAACGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAAc > 1:721684/1‑289 (MQ=255)
cAAAGACCGAAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCTAcgcc > 2:1449431/1‑288 (MQ=255)
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AATCTGTGGCGCTATGTTGTTGCTACGTTGGGCAGCAATGATTTGGGGCTGAGCAGTGACAAACGAAGACAGCCAGACCGCATAACACGGTCCGGCAGATAATTTTACATGCTGTAGCCCAGGCTTAAGGTTGTCCGACGGTCGGTATGTTCCGGTGCAGACTCTGGAGGTTCAGAGTTCCATGTGACGTTGTAAGCCACCTTCAGTCCAAAATGTTCATTAATAGCAACATTTAATGCGCTTTCGGAGTTCAGCGTTGTGTCTTCCGCGCCAAAGACGCTAACACCCTGCGTAAATTTAGCGTTGTCAGTCAACTGCCATGCATAAGCCCCGGAGGCATAGCCCAGCGGCTGGGTTTCACTGGCATTGTCGGTATATTTGTCGTAACGCACACCTGGACCGAATTCAAAGCGGAAACTGTGTACCGGGCCATTCAAAAACTGACGACCATAACCCGCGGTCAACACATCGCGCTCTCGATAGCCGTTATAACGGTCTGTCAGCCAGCTTGCCTGACCAAATAAATAGTCATAATCAGTTAAATTAAAACGGCTACGCC > CP042583/1487172‑1487730
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| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
GATK/CNVnator alignment
N/A
